Mugil cephalus (flathead mullet): 125009470
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Entry
125009470 CDS
T08342
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcep01009
]
125009470 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125009470 (sh3rf1)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125009470 (sh3rf1)
Protein phosphatases and associated proteins [BR:
mcep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125009470 (sh3rf1)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125009470 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125009470
NCBI-ProteinID:
XP_047443426
EnsemblRapid:
ENSMGCG00000022793
LinkDB
All DBs
Position
6:complement(10562166..10592520)
Genome browser
AA seq
866 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPGAGVCTNGTSGAVARAHGGGTRDPGAPGPQPQRSQ
AKSTLVRGVPQLPCAKALYNYDGKEPGDLKFNKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNLAARQLIELDKPSDSSGDSGEGASSGAQSNGAQRAGEKKNSKKRHSF
TSLTMSHKPVLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSMPVDALPPPPPPPPQSSVGGAAYSLAAGQRPSP
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSSQSKVPISLCTQAGRGVTIVSPSSAPLGAVAPGPDLHKPLTVSSS
AVPASSQPAAVVTAAQTATGQQPKVPLHVSSQMTVNQARNAVRTAACHSQDRPTAAVTPI
QSAAAVAYLPHLAVCTQTSTSPAQGCNRVGVAMGCAAASLTPPNVSAASLDGDALRSVSV
LAVPVGPGNSSALNPMSNSAALACRLDKDIKREKKSLLKLLSSNKKKSRPSPPSSPTLEA
EQAAVGEVLHGAVGPDTSPPSGSVSGLEPETAAVASASSSSTSSSSSSVPESSHRKSSPL
DGCAPIAPPPRQPCSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKR
EDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagtgctgttggatttgcttgaatgccccgtttgtttggagcgtcttgat
gcctcggccaaggtccttccatgtcagcacaccttctgccgccgatgcctccaaggcatc
ctaggctcacgtggggagttgcggtgcccggagtgccggacgttggtggagtgtgccgtg
gacgaacttcccagcaacatcctcctcgtgcgccttttggacggcatcaagcagaggccc
cgcagggcaggccctggggcgggcgtctgcacaaatggtacgtccggagccgtggccaga
gcacacggaggcgggacgagggacccgggcgcccccggaccacaaccccagcgatctcag
gccaagagcacccttgtccggggtgttccccagctaccgtgtgccaaggcgctctataac
tacgatggcaaggaaccaggagacctcaagttcaacaagggggacattattatcctgcgc
cggcaagtggatgagaactggtaccacggggagatgggtggagtccacggatttttccca
actaactttgtccaggtcattaagccgctgcctcagccgccccctcagtgcaaagccctg
tatgactttgagctcaaagacaaagaggccgacaaggactgcttgccgttctccaaggat
gatatcctgactgtgatccgcagagtggatgaaaactgggcggagggaatgctgggagat
aaaattggaatttttcccatctcatatgtggagttcaatttggcagctcgtcagcttata
gagttggacaagccgtcagactccagcggggactctggtgagggggcctcctcgggggcc
cagagcaacggtgcccagcgggcaggggagaagaagaacagcaagaaacgacattccttc
acctctctcaccatgtcacacaaacccgtgctagctcctcccccccagcgccactccatg
gagattagtggtccggtcctcatcagctccagcaaccccacagctgctgccagaatcgga
gagatcagtggggggctttcctgcagcgcaccttcacaggtacacatttgcacaactgga
ctaattgtgaccccacctcctagtagtcctgttactacagcaacagtcttcacatttccc
tcagagacgagctacacatccatgcctgtggatgctctcccaccgcccccacctcctccc
ccgcagtcctctgtcggcggagcagcatactcactggctgctggacagagaccctccccc
agcataagcgaccaaagtgggagacaaagacccacagtctatgtggcaatgttcccctac
actccccgcaaggaggatgagctggagctgaggaagggggagatgtttctggtgctggaa
cgctgtcaggacggctggttcaagggcacctccatgcacactggcaagattggagtcttc
cccgggaactacatgagcccagtcagcaggacggcgtctgggagcagccagtccaaagtg
cccattagtctgtgcacgcaggctggcagaggagtcaccatcgtcagcccctcttctgct
ccactcggggccgtcgccccgggccctgacttacacaaacccctcactgtgagctccagc
gctgtaccggccagctcccaacctgcagctgtggtaacagcagcccagacggccacaggc
cagcagccaaaagtcccgctgcacgttagctcccagatgactgtaaatcaggctcgcaat
gcagtcaggacagccgcgtgtcacagtcaggacaggcccaccgccgcagtgacacccatc
cagtctgcagcagccgtggcctatctcccacaccttgcagtctgcacgcagacctccacc
agtccggcacaaggatgtaaccgggttggagtggcgatgggctgcgccgcggcctctctg
accccacccaacgtcagcgccgcgtctttggacggcgacgctttgaggtccgtgtctgtc
ctcgctgtccccgtcggccctgggaacagctctgctctcaatcccatgtctaacagtgct
gctcttgcctgccgactggacaaggatatcaagagagaaaagaaaagtcttctgaagctg
ttgtcctcgaataagaagaagtctcgtccctcgcccccctcctcccccaccctcgaggcg
gaacaggctgctgtcggtgaggtgctgcacggtgctgtgggccccgacacctcccctcca
tccggctcggtcagcggcctggagcccgaaactgctgctgttgcttctgcctcatcatcc
tccacctcgtcctcctcctcctctgtcccagagtcctcccaccggaagagcagccccctc
gacggctgcgcccccatcgctcctcctccccgccagccgtgctcctctcttttatctcaa
cagcatgacgcacgtcccatcatatgtgagaggtacagagtggtggtatcgtatcctccc
cagagcgaggctgagctggaacttaaggagggcgacattgtgttcgttcataggaagagg
gaagacggctggttcaaaggcacgctgcagaggaacggcaggaccggactgttccctggc
agcttcgtggacagcatctag
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