Mugil cephalus (flathead mullet): 125009572
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Entry
125009572 CDS
T08342
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125009572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125009572
03036 Chromosome and associated proteins [BR:
mcep03036
]
125009572
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125009572
Coactivators
SAGA/TFTC/STAGA complex
125009572
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125009572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
125009572
NCBI-ProteinID:
XP_047443593
LinkDB
All DBs
Position
6:complement(15438282..15451058)
Genome browser
AA seq
712 aa
AA seq
DB search
MATNKVVIEAQKLEPRGPLGDGDASVQVRILQVPAKCGPIKVIQPPPPAASGPKGDSVSA
PSKVTSCGQGHQPTSSSSVTVSVPHSSPSSVVVVAKAVTPGGVSAGSQQVAKQALSQMAS
KKQVTTTGSAMVITVPRSAASQAVAPQRPQTASPQLPGNIHIPPGMMLIRSDGGQLMLVS
QQALAQAQQGSRLVRGQAPRILAPQISAAAGSKNNEKVTVIRLAAPSSFQPASAQKTMVI
GAPPKSAVVQSVSEHGSHRHIQAPVTETKKGPTASFSQETLESVKKCKNFLVTLIKLASG
DSRSATMANNVRGLVRSLLFFYPQEGKLEAEEFTEQLYNELKSTPQPCLVPFLKKSLPAV
RCLTADPQLFVQQASTSSCNATGLSSTMKQSNTDTGQNLNTSQQGVQQVREVTLRPGLTT
LAQSRNYITKRNGPTPRFAGVQPGKHFSGAFLVKQPFTRDLSHPTKFAFKDNSGSYKEDD
DINDVASMAGVNLREENAQILTSVVGSVVQSCQDQLFLSPPPMLSRILRTGQPLGITDVG
PEVVALVSHATQECLRGILEKLTVMAEHRRGALKEDECHGKMSDVRSQLRFLEEVESLKK
KRKDEEERERLLRLARSRSHAEDPQHQQLKQRAKELQQIEEAQLQQREANLAALAAIGPR
RKRPLDQTESQVSLLPRPGVQRVTRVMLKDLLVCMEQEHFLRHSLTLYKAML
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataaagtggtcattgaagcccaaaagctggagcctcgtgggccactaggg
gacggagacgcttctgttcaagtcaggatattacaggtcccagccaaatgtggacccatc
aaggtcattcagcctccacctcctgctgcaagcggcccgaagggtgactctgtatccgcc
ccatctaaagttacctcctgtggccaggggcaccaacctacctcctcctcctcagtcacg
gtgtcggtgcctcactcctccccttcctctgttgtggtggttgcgaaggctgtgaccccg
ggaggagtgagcgccggcagccagcaggtagccaaacaggctctaagccagatggcttcc
aagaaacaggtcacaaccacaggaagcgcaatggtcataactgtacccaggtcggcagcg
tcacaggcggtcgcccctcagcggccgcagacggcatccccacagctcccaggcaatatc
cacataccaccaggtatgatgctaatccgtagcgacggtggtcagctgatgctggtttcc
cagcaggctctggcacaggcacaacagggatccagacttgttcgcggtcaagcaccgaga
atactggccccacagatatctgcagctgctggaagtaaaaataacgagaaagtgaccgtg
atcaggttggcagccccttccagtttccagcctgcatcagcccaaaagacaatggtaatc
ggtgctcctccgaaatcagctgtggtgcagtccgtcagtgagcatggaagccaccgtcac
attcaggcacccgttacagaaaccaaaaaagggccgacagcctcgttcagtcaggagacc
ctggaaagtgtgaaaaagtgtaagaacttcctggtgacgctgatcaaactggcttcaggt
gactccaggtctgccaccatggctaacaacgtcagaggactggtcaggagcctactgttc
ttttacccacaggaaggaaagctggaagcagaggagtttacagaacagctgtacaatgaa
ctgaagtccactccacagccgtgcttggtgccttttctcaagaaaagtcttcctgcggtg
cgttgcctcactgcagacccccagctgtttgtccaacaggcttcgacttccagctgcaac
gccacaggtctgtcttcaacaatgaaacagtccaacactgacacaggacaaaatctcaac
accagccagcagggtgtccaacaggttcgagaggtgactctgagacctgggctgacaaca
ttagcccaatctagaaattacataacgaagcggaacggacccacccccagattcgctgga
gtacagccaggaaaacacttctcaggagcttttctagtgaagcaacccttcacccgggat
ctttctcatcctaccaaatttgctttcaaagacaattcaggatcttacaaagaagatgac
gacataaatgacgtcgcctccatggctggagtcaacctgagagaggagaatgcgcagatc
ttgacctctgtggttggttctgtggtgcagtcatgtcaggatcagctcttcctctcacct
cccccgatgctcagccggatccttcgtacaggtcagccgctgggcataactgatgtgggt
cccgaggttgttgctctggtttctcatgctactcaagagtgtcttcgcgggatcctggaa
aagctcactgtaatggcagagcaccgcagaggagccctgaaggaggacgagtgccacggc
aaaatgagcgatgtgcgctctcagcttcgcttcctggaggaagtcgagagtttgaagaag
aaaaggaaggatgaggaggagagggaacgactgctccgtttggctcgaagtcgctcgcac
gctgaggatcctcagcatcagcagctcaagcaaagagccaaagagttacagcaaatagaa
gaagctcagcttcagcaaagagaggccaacctcgctgctctagctgccattggtcctcga
aggaagagacccctggatcagaccgagagccaggtttccctgctgcccagacctggtgtt
cagagagtgactcgggtgatgctgaaggatctgctggtgtgtatggagcaggagcacttc
ctacgtcactctctcactctgtacaaagcaatgctttga
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