Mugil cephalus (flathead mullet): 125010162
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Entry
125010162 CDS
T08342
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125010162 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125010162 (chd8)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125010162 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
125010162
NCBI-ProteinID:
XP_047444492
LinkDB
All DBs
Position
7:complement(23104734..23121579)
Genome browser
AA seq
2571 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFTQGSSDPVEEALKLALGQVDPTTEPEPTSELAVNT
GLSVPVAAPASVQVPTQQPVPVANAQTVSLAAAPTVTSVPADTVPQIQAQTTIPIVSNAS
GATSSTVLLSSPLTVSSSPATTTATTQQLTQITHQLTPQQLAAITQQAGGKIVILKGPQG
QAQVLQTVSGATGQTSGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQTQLKVGAAGVQR
LLQSPNGPVKQLLLTSMPQQVQQTQGQPVQVQIPAQTQITQGQVQVQPQTTQIQVQAQGQ
VQLQPAMQAQTQGGEPKRITLVLQQPSQTGSATPGQAVATQQQVTQVQQVQTAQGGQQQQ
SQVPARLVLGQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVK
YQLVSGTGNTGSPQVLQISQGQGGQRVAVPIKMLLQPQTSVASSAGGTVSVVKVLNTSAA
GPSTTTTTSSQAIRITKAPGEAAPVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVL
NQDELPATQTSPELGGTVTVVSTAKKKSSGGGSKKKSPVAGGAVPKTGGGADKKGKVKPP
GATVVVAGGTVIAGAGNKSKSKTKTNTITLVGAKKRKRNTSSDHSDGELSPASPAALDED
MIMKRRSNRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISGGTAAQLKQEIEL
DGDGLPSMQFFVENPSEEDAAIVDKILSLRLTKKEVTPGQYINVEEFFVKYKNYSYLHCE
WASMEQLEKDKRIHQKIKRFKTKHAQMRHLFHEEEEPFNPDYVEVDRILDVSHSIDKDNG
EPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFGKIQNRQPRLKRTTRPQASSWKKLEE
TREYKNGNILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEIYSAGIQGP
FLVIAPLSTITNWEREFSTWTDMNAIVYHGSLASRQMIQQYEMYCKDGKDHLIPGAYKFD
ALITTFEMVLSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPTQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKQETIIEVELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYL
INGAEEKIVAELREVYDPMAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVR
CLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA
ADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRA
VLQSMSGNKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRAT
TITIESEGKGSTFSKASFVASENRNDIALDDPEFWEKWAKKADIDMDSINRKNTLVIDTP
RVRKQTRQYSTLRGEGGDLSDLDSDDEYPPANSRQSRASRRADRHSGGGYGRTDCFRVEK
HLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPP
ENGREPQTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHL
KHQCNKVLLRVRMLYYLKQEVIGEHADSVLKGANIRDVEIWMPELEQQEVPAGWWDSEAD
RSLLAGVFKHGYEMYTTMRADPCLSFLERAGRPDDKAIDAEQHTGDAELGDDADYDKYSE
DPEFKPQSSRHAKDLFEEADSMNVDDEISVEDKAGPVVTESFSSQSGAWPSSSSLTARLR
RLITAYQRSYRQEQLKIEAEAKGDRRRRRCEQATKLKEIARQERQQRWTRREECDFYRVV
STFGVEKIKTEPGLLEGGGPEHDWTRFRTFARLDKKTDESLSRYFRSFVSMCRRVCHLRP
NHDEDPSTLTTVAPITEERASRTLYRISLLRRLRERVLPHPSLMERLALAPTSSELPAWW
SIPDHDHQLMLGASLHGVSRTELSIFPDPQFTFSQTREEFIQNQQAPPPPPPPQAPPIMT
LGQLKTEEDLSGLKEDGADDSARLLGGEICADLQSTPLTHHDGKVQSQSWSFKRSKVKGE
KSVRKEGGSDSDSDSDSGSSSSDRSGSSDESGESEEEVDRAAMKVCDVDEDNSLLSMTPS
QDGIPPPDPLRVDWPKDRVLINRLDNLCTLVLSGQWPSGRRYVSEAQLNPISELVGDEMA
YTRLIRKSINTSGAPGAEGEDGEFTVKLLKEEGLKLTFSKQALMPNGSGGESSSRKKRKD
QELSDLDGLDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRADKALTGS
EKVKLINMRTGKKVGAAFCPMLQDLREYLEENPDNAVAPEWSETVRNSGFLPETLFHRLL
TEHSEIPKKSRRRHHHHHHHHHHHHTPEPIPEDPNIDGVEEETLVSDGAYMMDEEDLETS
HHFLTTPDFDVKMEGGDSLSQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7716 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccattatggacctctttgaggacacacccctgtttaacctggacgcccta
ccagacgactccttcactcagggctcctcagaccctgtggaggaagcactcaagctggcg
ttgggccaggtggatccaacgactgagcctgagcccacgtccgagctcgcagtcaacaca
ggccttagtgttcctgtagcagctcctgcctcggttcaagtccccacacagcagccggtg
ccggtagcgaatgctcagactgtttccttagctgcagctcccactgtgacctcggtccct
gctgacactgtacctcagatacaggcccagaccaccatacccattgtcagcaacgccagt
ggggccactagtagcactgtcctgctgagctcacctctgactgtttctagctcaccggct
accaccaccgccaccacgcagcagctcacgcaaataactcaccagctcaccccccagcaa
ttagctgccatcacgcagcaggctggtggtaaaattgtcatcctcaaaggtccgcagggt
caggcccaggtgctgcagactgtgtcaggggccacaggccagaccagtggaaaggtcatc
cgtgtcttgtctggcactccactcaaacctggcatgtccatactgcaggggggaacagtc
ttgaatcaggcgagcccaggacagactcaactcaaggtgggtgctgcaggggtgcaaagg
ctgctgcagtctcccaatgggccagtcaaacagttgttgctcacttccatgccccagcag
gtacagcagacgcaaggccaacctgttcaggtgcagattccagctcaaacccagataact
caaggccaggtccaagtccagccgcagacaactcagatccaggtccaggcacagggccag
gtgcagctccagccagccatgcaggcccagacacagggtggtgaaccaaagcgcatcacc
ctggtccttcagcagccctcccagactggctcagccacaccaggtcaagctgttgcaacc
caacagcaggtcacacaagtccagcaagttcagactgcacaaggggggcaacaacagcag
tcccaggtcccagctaggctagtgctgggtcagctccctggtggcaaactggtgcttcag
ggaagccagctagcggctctgacccaggctcgggctgcaggccaggctggagggcagccc
aaagtcctcacaattcaactgcaggtgcagcagcagcccaaccaacaaggaggagttaag
taccagctggtttcaggaactggtaatactggcagcccacaggtgttgcaaatctctcag
ggccaaggaggacagagagttgcagtaccaataaaaatgcttctacagccgcagacaagc
gtagcctcatccgctggtggcacagtgtccgtggtgaaggtcctcaacacttcagctgca
ggcccctctactactaccaccacttcatcccaggccatccgcatcaccaaggcccctggc
gaggctgcccctgtgcgacgagtggagatcctttgcaagcaggagaaagcaaaccgtata
gtggctgaagctatagcccgagctaaagcacgtggtgagaagaacctccccagagtcctg
aaccaggacgaactaccagccacacagacctccccagaattgggcggtaccgttacagtg
gtgtccactgcgaagaaaaaaagcagtgggggaggaagcaaaaagaaaagtcctgtagcc
ggaggagcagtgcccaaaactggaggaggggcagacaaaaagggcaaagtgaagccacca
ggggctaccgttgtggtggctggaggcacagtaatagctggggctgggaacaagagcaaa
agcaagactaagacaaacacaattactcttgtgggagcaaagaaaagaaagagaaacaca
tcttctgatcactctgatggggagctgagccccgcctcacctgctgcactggacgaggac
atgattatgaagaggcgctctaaccgtgtggtgaagaggaagaagtacacagaagacctg
gatatcaagataacagatgatgaggatgagcaggaagatgtggatgttactaccactgct
gcagcggtggcctccatcagtggagggacagcagcgcaacttaaacaagaaattgaactg
gatggtgatggactacccagcatgcagttctttgtggaaaacccaagcgaggaagatgca
gccatcgtagacaaaatactatcgttgagattaaccaagaaggaagtgactccaggccag
tatatcaatgtggaggaattctttgtaaaatacaagaactattcatacttacactgtgag
tgggccagtatggagcagctggagaaagataagaggatccatcaaaagatcaagaggttc
aagaccaagcacgcacagatgaggcacttgttccatgaggaggaggaaccttttaaccca
gactacgtggaggtggacaggatcctggatgtttcccacagcatagacaaggacaatggg
gagcctgtcatctactacttagtgaagtggtgctctctgccatatgaagatgccacttgg
gaactgaaggaggatgtggatgaaggaaaggttgaagaatttggcaaaatccaaaaccga
caacctcgcctgaagagaacgacacgtccacaagctagttcatggaagaagttggaggag
accagagagtacaagaatggtaatatcctaagagagtatcaactggaaggagtcaactgg
ctactcttcaactggtacaacaggcagaactgtatcctggcagatgagatgggtctggga
aagaccatccagtccatcgcactgctgtctgagatatattctgccggtatccagggcccc
ttcttggtcattgctcctctgtccaccataaccaactgggagagagagttctccacatgg
actgacatgaatgccatcgtctaccacggcagcctggccagcagacagatgatccagcag
tatgagatgtactgcaaagatggcaaggatcatttgatcccaggtgcctacaaatttgat
gccctcatcacaacatttgagatggtgttgtccgactgcccagaactgagggagatttcc
tggcgttgtgtggtcattgatgaggctcatcgcctcaaaaatcgcaattgcaagctgttg
gacagtttgaagatgctggacctggaacacaaagtgttgttgaccggcactccccttcag
aacactgtggaagaactcttcagtctgctgcattttctggagccaactcagttcccctct
gaaactgaatttctcagagactttggagatctcaaaacagaggaacaggtccaaaagtta
caggcaatcttgaaacccatgatgttacgaaggctcaaggaggatgttgagaagaacctg
gcacccaaacaggagaccatcattgaggttgagttgacggatgtccagaagaagtactac
cgggccatcctggagaggaacttcagtttcctcagcttaggggcaaacagtaacagcaat
gtccccaacctgctcaatactatgatggagctccgcaagtgctgcaaccacccctacctc
atcaatggtgcagaggagaagatcgtagcggagttacgagaggtgtatgaccccatggcc
cctgacttccatttgcaggcccttattcgctcggccggcaagctggtgctactggacaag
ctgctgcctcgcctgaaggctggtggccacaaagtgctcatcttctcccagatggtgcgc
tgcttagatattttggaggactacctcatcaacaaaagatacctttatgaacgaattgat
ggcagagtgcgtgggaacttacgtcaggctgccatcgatcgcttcagcaagcctgactca
gaccgcttcgtcttcctgctgtgtacccgtgctggtggcctgggtatcaacctcactgct
gctgacacctgtgttatatttgactctgactggaaccctcaaaatgacctgcaggcccaa
gcacgatgccatcgtattggccaatccaaggcggttaaggtctaccgtctcatcactagg
aattcctatgagagggaaatgctagataaagccagtctgaagctcggcctggaccgtgct
gtccttcaaagcatgagtggcaacaaagaaagcaacgtcaacgggatccagcagttctcc
aagaaggagatagaggatctactaaggaagggagcctacgctgccatcatggatgagaat
gatgagggcagtcgcttctgtgaggaggatatcgatcagatccttcagcgaagagccact
accatcaccatcgagagtgagggcaagggttccacgttctccaaagccagctttgtggcc
tctgagaaccgcaatgacatcgctcttgatgaccctgagttctgggagaagtgggccaaa
aaagctgacatagacatggattctatcaatcggaagaacactcttgtgattgacacgcca
agagtccggaagcagacccgtcagtactccaccttacgaggagagggtggagacctctct
gatctagacagtgatgacgagtatccacctgccaattcgagacagtcgcgtgcgtctcga
cgcgctgaccgccatagcggaggaggttatggacgcacagactgcttccgggtggagaaa
cacctgcttgtctatggttggggtcgctggagagacatcttgtcgcatgccagatgtaag
cggcgtctgagtgagcgtgacgtggagaccatctgccgtgttatcctggtcttctgtttg
ctgcactatcgaggagatgagaacatcaagagtttcatctgggagctcattacgccgcca
gagaacggccgtgaaccccaaacactactaaaccactcaggcctgtccatccctgttcca
agaggcaggaagggtaagagggtaaaggcccagagtacttttgatgttcagaaggtggag
tggattcgcaagtacaaccccgacactctgctgcttgatgacagctaccgcaaacacctc
aagcaccagtgcaacaaggtgttgctgagggttcgtatgctctactacctgaaacaggag
gtgattggtgaacatgcagattctgtcctgaagggggcaaatatcagggatgttgaaatc
tggatgcctgagctggagcagcaagaagtgcctgcaggatggtgggattctgaagcagac
cgctcactgcttgctggtgtattcaaacatggttatgagatgtacaccaccatgcgtgct
gatccctgcctctctttcctggagagagctggtcgtcctgatgacaaggccattgatgcc
gagcaacacactggtgatgctgagcttggggacgacgctgactatgataaatactcagaa
gaccctgagttcaaaccccagagttcaagacacgccaaagatcttttcgaggaggctgat
tccatgaatgttgatgatgagatctctgtggaagacaaagcggggccagtggtgacagaa
agtttttccagccagagtggtgcgtggccctccagctcatcgctgacggcacggttgcgg
cggctgatcacagcttaccagcgcagctacagacaagagcagctgaagattgaagccgag
gcgaagggcgaccgcagacgcaggcggtgtgaacaggccaccaagctgaaggaaatcgct
cgtcaggagcgacagcagaggtggacacgtagggaagaatgcgacttctaccgtgtggta
tcaacgtttggtgtggagaagataaaaacggagcctggtcttcttgaaggaggaggaccg
gagcatgactggacccgtttccgtacctttgctcgtctggataaaaaaactgatgagagc
ctcagtcgatacttccgctcctttgtttccatgtgccgacgggtttgccacctcaggcca
aaccacgatgaagatccatcaacgctcacaactgtggctcccatcacagaggagcgcgct
tcccgtaccctttaccgcatcagcctcctgcgtcgcttgcgcgagcgagtcctgccccat
ccttccctgatggagcgtctggctctggctccaaccagctccgagctgcctgcttggtgg
agcataccagatcacgatcatcagctaatgctgggtgcatcgctgcatggcgtcagccgc
actgagctctccatcttcccagacccgcagttcactttcagtcagacacgcgaagaattc
atccagaaccagcaggccccaccgcctccgccaccaccgcaggcaccgcccatcatgaca
cttggccagctaaaaacagaagaggacctgtctggactgaaggaggacggagctgatgac
agtgctcggttgcttggaggagaaatctgcgctgacctgcagagcactcccttgactcac
catgacggcaaagtgcaaagtcagagctggagtttcaagaggagcaaggtgaagggagaa
aaaagtgtcaggaaggagggagggtctgattcggattcggattcagattcaggctcatca
tcctcggaccgatcaggcagcagtgatgaaagtggagagagtgaggaggaggtagataga
gcagccatgaaggtgtgtgatgtagatgaagacaacagtttactgtccatgacaccgtcc
caggatggcattcctcctcctgatcctcttagagttgactggcccaaggaccgcgtgttg
atcaaccgcttggataatttgtgtacgctggtgctgtctggtcagtggccctcaggtcga
cgttacgtgtctgaggctcagctcaacccgatatcagagctggtgggggatgagatggct
tacacaaggttgatccgtaaatccatcaacacgtctggtgcccccggggccgagggagaa
gatggagagtttactgtaaaacttctcaaggaggagggcctgaagctgactttctctaag
caggctctgatgcccaatgggtcagggggagagagcagcagccgcaagaaacgcaaggac
caagagctgtcggacctagatggtctggatcctttggaacgtactccacgacgcagggat
ccacccacgtggctcaaggagaacccagattatgaggtagaaggagatatgctggagctt
cttgtgaacaggagcaagaggaagaggaggaggagggcagataaagccctgacaggcagt
gagaaagtcaaactcattaacatgaggacaggaaagaaggttggagctgctttctgcccg
atgctccaagacctgagggaatatctggaggagaatcctgataatgctgtagcacctgaa
tggtccgaaacagttcggaactctggatttctgcccgagaccctcttccatcgactgctg
accgagcactcagagatccccaagaaaagccgacgccgccaccatcatcaccaccaccac
caccatcaccaccacactccagagcccatccccgaagaccccaacatagacggggtagaa
gaggagactctggtgtcagatggagcctacatgatggatgaggaggacctggagacctcc
catcacttcctcaccacgccggactttgacgttaaaatggaaggcggtgacagcctttcc
caaggtgactatgacagctcggatcaagaggcgctattggacgatgtcatcatagcacag
aaggactcagactcctcatcaagctcagaggattga
DBGET
integrated database retrieval system
