Mugil cephalus (flathead mullet): 125010508
Help
Entry
125010508 CDS
T08342
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125010508 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125010508 (wdr33)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125010508 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
125010508
NCBI-ProteinID:
XP_047445136
LinkDB
All DBs
Position
7:complement(1085291..1101797)
Genome browser
AA seq
1071 aa
AA seq
DB search
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDIEPNSLAAIPGMGIPEQLKAAMEQEQSSKESVPEVEMSIPGLDWGMDE
VMGKDAKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPSGDLSKDRKVEQKVDVKKKSQA
EIEQEMASLQYTNPLLLEQMKMDRMNQMNSDGNMGPAQGQGSMPPFSGPGGPGGPGGPMP
PGQQGFPPNMPPQQMPNTMGPPMGPGGMQPPFMAPGQMGPPSGPQGPPQGMMGPPDMQGP
QGMQRHPGPPRNMGSQGPHNMGPRGMQGPPGGMMGPPPRGMGPRDPQGPPPQGGMMPSQG
NMMGPQGPMQGGMMGPPPRTHGNMPNNYGMGNMQGPPGGMHGPPGNIQGPHGNMQGPPGN
MQGPPYMQHQGQNSGPMMHGMGQQGPNSKDPRGPPSNHHMGPPDRQGPGGPDQGSGPYWG
DSQQGRRGPQDFDGGQDFHSREEGWRPGPGYQGGGGSHRGGGHRGGGGGGGGNWGPEERF
GGGEFRGRRDDRFRGGPGRPGGRSYPEEFGGQEEVFDGPEEMSRGWDGGGRGRPPRGGGP
PRGGGHEGYRDGQMHDGSSPAGRERSSSLQGMDMASLPPRKRPWQDGPGTGDPRDRESPG
ADGGRPLRDDVYGPPGRGGRGGWAPGGGPGPGPRRGGPPPRGVPRGGGRGR
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacatcggctcgccacagcggttcttccacatgccgcgcttccagcaccag
gcgccgcggcaggtcttctacaagaggccggacttcgcccagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggccgtgaaccgcaagaccatcgactacaac
ccgtctgtcatcagatacctggagaaccgcctgtggcagcgcgaccatcgagacttcaga
gccatccaaccagacgcaggctgttataacgatctggttcctcccgtcggcatgttgaac
aacccaatgaatgccgtcaccaccaagttcgtccgcacctccaccaacaaagtcaagtgt
cccgtgtttgtcatcaggtggactcctgagggacgccgtctggtcaccggggcgtccagt
ggagagttcacgctgtggaacggactcaccttcaactttgagaccattcttcaggcccac
gacagcccggtccgggccatgacctggtcccacaacgacatgtggatgctgacggcggac
cacggcggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagcttctctcccacagataataaattcgccacctgc
tctgatgacgggaccgtccggatctgggacttcctgcgctgccacgaggagcggatcctc
cgaggacacggtgcagacgtcaagtgtgtggactggcatcccaccaaaggcctggtggtg
tcagggagcaaggacagccagcagcccatcaagttctgggaccccaagacgggacagagt
ctggccacgctccacgcccacaagaacacggtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcgtccagggaccatctctgcaaactgttcgacatcaggaacctg
aaggaggagctgcaggtcttcagaggacacaagaaggaggccacagctgtggcgtggcat
cctgtccatgagggcctgttcgccagtggaggttctgacgggtccctgctcttctggaac
actggggtggagaaggaggtgggtgggatggagatggctcatgaggggatgatctggagt
ttagcctggcacccgctgggtcacatcctgtgctccggctccaacgaccacaccagtaaa
ttctggacgaggaatcgtcccggagacaagatgagagaccgctacaacctgaacctgctt
cctgggatgtcagaggacggcgtggagtacgacgacatcgagcccaacagtctggcagcc
atccctgggatggggatccccgagcagctgaaagccgccatggagcaggagcagagcagt
aaagagtcggttccagaggtggagatgtccatccccggactggactggggcatggacgag
gtcatggggaaagacgccaagaaggttcctcagaagaaagttccctacgctaagcccatc
ccagcccagttccagcaggcctgggccgagaacaaagtacccatgatgcccccctctgga
gacctgtccaaggaccggaaggtggagcagaaggtggacgtgaagaagaagagtcaggca
gagatcgagcaggagatggcgagtttgcagtacaccaaccccctcctgctggagcagatg
aagatggaccggatgaaccagatgaactcagatgggaacatgggccccgcacagggacag
ggctccatgcccccattctccggtcctgggggtcctgggggtcctgggggccccatgcct
cctggccaacagggctttcccccaaacatgccacctcagcagatgcccaacaccatgggc
cccccgatgggccctggaggcatgcagccccctttcatggcccctggacagatggggcca
ccttctgggccccagggtccccctcagggcatgatgggacccccagacatgcaaggaccc
caaggtatgcagagacatcctggccctccaaggaacatgggctcccaggggccacacaat
atgggacccagagggatgcaggggcccccgggtgggatgatgggccctcctcctcgagga
atgggtccaagggatcctcaggggcccccacctcaggggggcatgatgccctctcaaggg
aacatgatggggccccaggggcctatgcagggtgggatgatggggcccccacccaggaca
catggcaacatgcccaacaactatgggatgggcaacatgcaggggcccccaggagggatg
cacggccccccaggaaatattcaaggaccccatggaaacatgcagggacccccaggaaac
atgcaagggcccccgtacatgcagcaccagggtcagaactcggggcccatgatgcatggg
atggggcagcaggggcccaacagcaaagacccccgagggccaccctccaaccaccatatg
ggccccccggaccggcagggccccggaggcccggatcagggctccggcccttactggggg
gacagccagcaggggcggcgaggaccccaggactttgacggaggccaggacttccacagc
agagaggagggctggagaccaggaccaggataccagggcgggggggggagtcaccggggc
gggggccaccgaggaggaggaggaggagggggaggaaactggggccctgaagaaagattc
ggaggaggggagttcagaggacggagggatgacaggtttaggggcggacccggccggccc
ggaggccgatcctaccctgaggagttcgggggccaggaggaggtgtttgacggcccagag
gagatgagccgaggctgggatggaggggggcgagggagaccccccagaggaggaggaccc
cccagaggaggaggtcacgagggttaccgggacggacagatgcatgatgggtcgtctccg
gccggccgggagcgctcctcgtctctgcaggggatggacatggcgtccctgcccccccgt
aagcggccctggcaggacggacctggaaccggagacccccgggaccgagagtcccccggg
gctgatggaggtcgacccctgagggacgacgtctacgggccccctggccgaggaggacga
ggcggctgggctcctggaggaggaccgggcccgggcccccggagaggaggcccccctccc
agaggggtcccgagggggggcggccggggccggtag
DBGET
integrated database retrieval system
