Mugil cephalus (flathead mullet): 125010647
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Entry
125010647 CDS
T08342
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K28076
finTRIM family protein
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125010647
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125010647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
PRY
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
U-box
zf-RING_2
zf-RING_6
ANCHR-like_BBOX
zf-RING_5
Prok-RING_4
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
125010647
NCBI-ProteinID:
XP_047445364
LinkDB
All DBs
Position
7:complement(12342241..12357590)
Genome browser
AA seq
1069 aa
AA seq
DB search
MAQAGVLLDKDQFNCSICLDVLKDPVTIPCGHSYCSRCIQNYWDQDDYLGVFVCPQCRQN
FNPRPALNRNTMLADVVDRFRKTRLSEASAPPAQTSLAQADDVECDVCTGSKNKAVKSCL
VCLASYCDAHVQPHYESAAFKKHKLVSASKRLQETICPQHDKLLEVYCRTDKCCICYLCL
TDEHKGHDTVLVEAEIQQKQMQLGDMKHSSQMRAQQREKEAQELRQAIFSLTRSARAASE
ESDSVFSELIRSIELKRFEVRELIKAQEKMAVSDAEQLLERIQKEIAELKKSEAELDKVS
NTEDPVSFLQSCQSLHAPPGLPALPLVTSDPGLTVLPVMTALSDFKGLLQEVCQEGFVSI
YEKVKDVVIVGHQNPPVQHDATQSGDAGSAEHMETPILISPSGLDQTPISPLNPFLSAPP
AMPTFAFTPFGSKLSSGSRQRHPQRRAHRSRDQCTCELRPSLFLPCSVHSRREMAAATIS
IEQDQFCCSVCLDVLRDPVTIPCGHSYCLDCIEDYWNRPKQKGQYSCPQCRQVFNPRPLL
SRNTVLGEVVEKFQRSGFHDAARPPLAKPEDVRCGVCPGRKSRAVKSCLACSESYCAGHL
RAHEQRFHGKSHKLIAPTEQPREKLCPQHDKLLRLYCHVEQQCVCSQCVKERHRGHETVP
AVDERDRQQKKLQEASLKSVQKLRDTEKEIRYVIRYFKHSAEAAVEESERIFSKLSRSIE
KQSCEVKELIRVQERAAVSQAEEALEKIQREIGELRRTEAELEKLSHTEDHIHFLQKCKS
LHFHTKPAEMPNTDALLYLMYKTMRGALADLKESLDENLHKEFSRISDKVIVLKENSSLS
NSEKTKEAAVKARQLEAVRKEIKNSSNTEKTKPKDIEISFNTEPKTRADFLQYHSDITLD
PNSANPFLWFSDGRRGVTTRSEAQPYPDHPDRFTSWAQVLCRAGMAGRCYWEVEWSGSGG
VSIGICYKNMSRSGGGSDSKLGHNSKSWSLDCSNTDCSFQHNKESVTIATSCSSRIGVYL
DFRGGTLSFYNVSETMVPIYKAKTTFTQPVYPGFWVGLGSTLKLSSLQV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccggagtcctcctggacaaggaccagttcaactgctccatatgtctggac
gtgttgaaggaccccgtgacgatcccgtgcggacacagctactgctccagatgcatccag
aactactgggaccaggacgactacctcggggtcttcgtctgcccgcagtgccgacaaaac
ttcaacccgaggccggcgctcaatagaaacaccatgctggccgatgtggtggacagattc
aggaagacgaggctcagcgaggcctcggcgccccccgcccagacttccttggcgcaggcc
gacgacgtggagtgcgacgtctgcaccgggagcaagaacaaggctgtcaagtcctgcctg
gtgtgtctggcctcgtactgcgacgcacacgtccagcctcactacgagtccgccgccttc
aagaagcacaagctggtgtcggcctccaagcgactccaggagacaatttgtccccaacac
gacaagctgctggaggtgtactgccgcaccgacaagtgctgcatctgctacctgtgtctg
acggatgagcacaagggacacgacacggtgctggtggaggcagagatacaacagaaacag
atgcagctcggtgacatgaagcacagctcccagatgagggctcagcagagagagaaggag
gcgcaggagctgagacaagccattttctctctcacccgctcggctcgggcagcgtcggag
gagagcgacagcgtcttctctgagctgatccggtcgatagagttgaagcgcttcgaggtg
cgggagctgatcaaggcccaggagaagatggccgtcagcgacgccgagcagctgctggag
aggatccagaaggagatcgccgagctgaagaagagcgaggctgaactggacaaggtttcc
aacacagaggaccccgtctctttccttcagagctgtcagtctctccacgctccacctggg
ctgccggctttgcctctagtcacctctgaccccggcctcaccgtgctccccgtcatgaca
gctctgtcagattttaaggggctgctgcaggaggtctgtcaggaaggatttgtcagcatt
tatgagaaagtgaaagatgtagttattgtaggtcaccagaatcctccagtgcagcatgac
gcgacgcagtctggtgacgccgggtcagccgaacacatggaaacgcccatattgatctct
ccatccggactggaccaaactcccatcagccccctcaacccgttcctctctgcaccacca
gccatgcccacctttgccttcacgccgtttgggtccaaactgtcttcaggatccagacag
agacacccccagcgacgcgctcacagaagccgtgatcagtgcacctgtgaactacgccca
tctttgttccttccctgttcagttcactcacggagggaaatggcagctgcgactatttcc
atagagcaggaccagttctgctgttcggtgtgcctggacgtgttgagggacccggtgacg
atcccctgcggacacagctactgcctggactgcattgaagactactggaacaggcccaag
cagaaaggccagtacagctgccctcagtgcaggcaggtgttcaacccgagacctctgctg
agcaggaacacggttctcggggaagtggtggagaagtttcagcgaagcggattccacgat
gctgcccgtccccccctggccaaaccggaggacgtgaggtgcggcgtttgcccggggagg
aaaagcagggctgtcaagtcctgcctcgcgtgctcggagtcttactgcgcgggccacctg
agagcccacgaacagcgcttccacggcaagtcccacaaactgatcgcgcccacggagcag
ccgagagagaagctgtgcccgcagcacgacaagctgctgcgcctgtactgtcacgtcgag
cagcagtgtgtgtgttcgcagtgcgtcaaagagagacaccggggccacgagacggtcccg
gcggtggacgagagggacagacaacagaaaaaacttcaagaagcctctttgaagtccgtg
cagaaactgagggacacggagaaggaaattagatatgttattaggtacttcaagcactcg
gcagaggcagccgtggaggagagtgagcggattttctccaagctgagccgatccatcgag
aagcaaagctgtgaggtgaaggagctcatcagagtccaggagagagcggccgtcagtcag
gctgaggaggcgctggagaagatacagagggagataggcgagctcaggaggaccgaggct
gagctggagaagctctctcataccgaggaccacatccacttcctccagaagtgcaagtct
cttcatttccatacaaagcctgctgagatgcccaacactgatgcacttctgtatttgatg
tataaaacaatgagaggggccctggctgatctgaaggagagtctggatgaaaacctccac
aaagaattcagcagaatatctgataaagtaattgtactcaaagaaaacagcagcctgagt
aactcggaaaaaactaaagaagctgctgttaaagcgagacaactggaagcagtaagaaag
gaaatcaaaaattcgagtaacaccgaaaaaacaaaacctaaagacatcgagatatcattc
aacacggagccaaagacaagagcagattttctacagtaccacagtgacataaccctggac
ccgaactcagccaacccttttctgtggttctccgatgggcggaggggggtgaccacgcga
tcggaagcgcagccttatccagaccacccggatcgattcaccagctgggcccaggtgctg
tgcagagccggcatggcagggcgctgctactgggaggtggagtggtctggaagtggagga
gtttccattggcatctgctacaaaaacatgagcaggagtggaggagggagcgactccaag
ctgggacacaactccaagtcctggagcctggactgctctaacacagactgttcatttcag
cacaataaagagagcgtgaccatagctactagttgcagcagcagaataggagtgtatctg
gacttcagaggtgggactttatctttctacaatgtctctgaaacaatggttccaatttac
aaagcaaagacaacattcactcagcctgtatacccgggattttgggtggggttgggctct
acgttgaagctgtcctctcttcaagtgtga
DBGET
integrated database retrieval system
