Mugil cephalus (flathead mullet): 125011453
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Entry
125011453 CDS
T08342
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125011453 (pif1)
03029 Mitochondrial biogenesis [BR:
mcep03029
]
125011453 (pif1)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125011453 (pif1)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125011453 (pif1)
Mitochondrial biogenesis [BR:
mcep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125011453 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
Mg_chelatase
AAA_7
RsgA_GTPase
AAA_16
ABC_tran
PhoH
AAA_5
GCOM2
AAA_24
Motif
Other DBs
NCBI-GeneID:
125011453
NCBI-ProteinID:
XP_047446634
LinkDB
All DBs
Position
7:20146354..20154022
Genome browser
AA seq
633 aa
AA seq
DB search
MSAVEDGAQLQCCVTVEQLNSSGQATRRQVIRKASVILGRNEFQEIILRVHDGKVPQNYH
LKEFKLFTKFYREGKCTVKLLPENIQVLISNCPPDQLSLFLKTLSIKHQALQACKTMSNR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSKAAPSGLADRTNKISVAGTGQQKKRSRSDS
NFSPVKANPSKKPILSLPSRKLNKEQAAVLSAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEISMVEAQFFDKLESVARSVRKSTEPFGGIQLIVCGDFLQLPPVSKGKEKANFCFQARS
WRKVIQVNMELTEVRRQTDQTFISLLQAVRVGRVTEEVTAKLMKSAYHQIETDGILATRL
CTHKDDVELTNENKLRQLPGAVREFEALDSDPVLVRTIDSHSPVSRLIQLKVGAQVMLTK
NLDVGRGLVNGARGVVVAFDSGKNGLPRVRFLCGTTEVLKPERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADP
DVLLFYKKLRKERLLMQASMDEFVGNSNKENVW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggtagaggacggtgcccagctgcagtgctgcgtgactgtggagcagctgaac
agctccggccaggccactcggaggcaggtcatccgcaaagcctccgttattttgggccgc
aatgagttccaggagatcatccttcgagtccacgacgggaaagtcccgcaaaattaccac
ttgaaagagttcaaactcttcaccaagttctacagagagggcaagtgcaccgtcaagctg
ctccctgaaaacatccaagtgctcatctccaactgcccccctgaccagctgagcctcttt
ctcaaaaccctgagcatcaaacaccaggccctgcaggcctgcaagaccatgagcaacagg
gagaagctcaaagccgggctgccacgcagcttcgaggccatcagccccctgcagcagaaa
gatatccagaaggtcaatgagctgagaagtaaagcagctcccagtggcctggcagaccgc
accaataagatctctgtggcaggcacaggacagcagaaaaaacgctccaggagtgacagt
aactttagccctgtgaaggccaaccccagtaagaaacccatcctatctctaccatcacgc
aagctaaataaagaacaggcagctgttctcagtgcagtgctgagcggcaagaacgtcttc
ttcactggaagcgcaggaacaggaaagtctttcttgcttaagaggatcatgggatctctc
cccccaaagagcacctttgccacagccagcacaggagtagctgcatgtcacattggagga
acaacattacacaactttgctggaattggctcgggttcggccccactggagcagtgcatc
gagctggctcagaggcccggggtgctgcagcactggactagctgtcgacaccttattatc
gacgagatctccatggtggaggcccagttctttgacaagctcgagtcagtagcaaggtct
gtgagaaagtctactgagccgtttggagggatccagctgatcgtgtgtggcgacttcctt
cagctgcctccagtttctaagggaaaggaaaaggccaacttctgctttcaggccaggagt
tggcgcaaagttatccaggtcaacatggagttaacagaagtacggaggcaaacggaccag
actttcatctccctcctgcaggcagtgagggtgggcagggtgacggaggaagtcacagct
aagctgatgaaaagtgcctaccatcagatcgagactgacggcattctagcgaccaggctg
tgcacacacaaagatgatgtggagctcacaaacgagaacaaactccggcagctgccaggc
gcagtacgtgagtttgaagcactggacagcgacccagtcctggtgaggactattgactct
cacagccccgtcagcagactgatccagctcaaagtgggagctcaggtcatgctgactaag
aatctggatgtcggtcggggtctggtgaatggagcccgtggggttgtggtggcttttgat
tctggaaaaaatggactcccaagggtacgcttcctgtgcggcactacagaggtgctgaag
ccagagcgctgggtctttaagtctggtggcgggatccacctgagtcggcagcagctgccg
ctcaaactggcctgggccatctccatccacaagagccagggaatgacgctggactgcgta
gaaatctctctggcgcgcgtgtttgagagcggccaggcttacgtggccctgtctcgggct
cggagcctggagggtctcagggtcatggactttgacccccgtgtggtccgggcagatcca
gacgttctcctcttctacaagaaactgaggaaggagaggctgctcatgcaggcctccatg
gatgagtttgttggaaacagcaacaaagaaaatgtctggtga
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