Mugil cephalus (flathead mullet): 125011771
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Entry
125011771 CDS
T08342
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03030
DNA replication
mcep03410
Base excision repair
mcep03420
Nucleotide excision repair
mcep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125011771 (rfc5)
03410 Base excision repair
125011771 (rfc5)
03420 Nucleotide excision repair
125011771 (rfc5)
03430 Mismatch repair
125011771 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125011771 (rfc5)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125011771 (rfc5)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125011771 (rfc5)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125011771 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
125011771 (rfc5)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125011771 (rfc5)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125011771 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
125011771 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_22
AAA_14
ResIII
AAA_24
DEAD
AAA_assoc_2
RuvB_N
AAA_16
nSTAND_NTPase5
PhoH
DUF815
AAA_5
AAA_7
AAA_19
ATPase_2
TIP49
AAA_30
bpMoxR
AAA_2
nSTAND3
DNAX_ATPase_lid
Thioredoxin_6
AAA_25
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
125011771
NCBI-ProteinID:
XP_047447047
LinkDB
All DBs
Position
8:3517933..3524773
Genome browser
AA seq
335 aa
AA seq
DB search
MDSTSKPTLQSRNLPWVEKYRPDTLDALISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACAKQLFKGKEFNSMVLELNASDDRGIDVVRGPIMSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQESIDISPDGMKAVVNLSSGDMRRSLNILQSTTMAYGKVTEDTVYTCTGHPRRSD
IANILDWCLNKDFTTAYNQILQLKTLKGLALHDILTEVHLLVHRVDFPPIIRLNLLIKLA
DIEHRLASGTNEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggattcgacaagtaaaccgacgttacagtccagaaatttaccatgggttgagaaatac
agaccagacacactcgatgccctgatctcacacaaagatattctgagcaccatccagaag
tttatcagcgaggacaaacttccccacctcctgttctacggccccccaggaaccggcaaa
acgtccaccatcctcgcctgcgccaagcagctctttaagggcaaagagttcaactccatg
gtgctggagcttaacgcctcagacgacagaggcatcgacgtcgtacgaggtcccatcatg
agttttgccagcaccaggaccatcttcaagaagggctttaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtcatcgagaagttcaca
gaaaacacccggttctgcctgatctgtaactacctgtctaagatcatccctgcgctccag
tctcgctgcaccaggttccgcttcggtcctttgtccccggaccagatgatcccccgactg
gagcacgtgatccagcaggagagcatcgacatctctccggatggaatgaaggccgtagtg
aacctgtcgtcgggcgacatgaggagatcactcaacatactgcagagcaccacgatggcg
tacgggaaagtgacggaggacacggtgtacacctgcacgggacacccccgccgctcagac
atagccaacatcctggactggtgcctcaacaaagacttcaccacagcgtacaaccaaatc
ctgcagctgaagactctgaaaggtttggctctgcacgacatcctcaccgaggttcatctg
ctcgtacacagagtggactttcctccgatcatccgactcaatctgctcatcaagttagcc
gacatcgagcaccgactcgcctcgggaaccaacgagaagatccagctgagctccatggtg
gcagctttccaggccgtgagggacctggtggtcagcgaagcgtcctag
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