KEGG   Mugil cephalus (flathead mullet): 125011771
Entry
125011771         CDS       T08342                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03030  DNA replication
mcep03410  Base excision repair
mcep03420  Nucleotide excision repair
mcep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125011771 (rfc5)
   03410 Base excision repair
    125011771 (rfc5)
   03420 Nucleotide excision repair
    125011771 (rfc5)
   03430 Mismatch repair
    125011771 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcep03032]
    125011771 (rfc5)
   03036 Chromosome and associated proteins [BR:mcep03036]
    125011771 (rfc5)
   03400 DNA repair and recombination proteins [BR:mcep03400]
    125011771 (rfc5)
DNA replication proteins [BR:mcep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125011771 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    125011771 (rfc5)
Chromosome and associated proteins [BR:mcep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125011771 (rfc5)
DNA repair and recombination proteins [BR:mcep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125011771 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    125011771 (rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_lid_RFC1 AAA_11 AAA_22 AAA_14 ResIII AAA_24 DEAD AAA_assoc_2 RuvB_N AAA_16 nSTAND_NTPase5 PhoH DUF815 AAA_5 AAA_7 AAA_19 ATPase_2 TIP49 AAA_30 bpMoxR AAA_2 nSTAND3 DNAX_ATPase_lid Thioredoxin_6 AAA_25 Glyco_hydro_57
Other DBs
NCBI-GeneID: 125011771
NCBI-ProteinID: XP_047447047
LinkDB
Position
8:3517933..3524773
AA seq 335 aa
MDSTSKPTLQSRNLPWVEKYRPDTLDALISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACAKQLFKGKEFNSMVLELNASDDRGIDVVRGPIMSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQESIDISPDGMKAVVNLSSGDMRRSLNILQSTTMAYGKVTEDTVYTCTGHPRRSD
IANILDWCLNKDFTTAYNQILQLKTLKGLALHDILTEVHLLVHRVDFPPIIRLNLLIKLA
DIEHRLASGTNEKIQLSSMVAAFQAVRDLVVSEAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggattcgacaagtaaaccgacgttacagtccagaaatttaccatgggttgagaaatac
agaccagacacactcgatgccctgatctcacacaaagatattctgagcaccatccagaag
tttatcagcgaggacaaacttccccacctcctgttctacggccccccaggaaccggcaaa
acgtccaccatcctcgcctgcgccaagcagctctttaagggcaaagagttcaactccatg
gtgctggagcttaacgcctcagacgacagaggcatcgacgtcgtacgaggtcccatcatg
agttttgccagcaccaggaccatcttcaagaagggctttaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtcatcgagaagttcaca
gaaaacacccggttctgcctgatctgtaactacctgtctaagatcatccctgcgctccag
tctcgctgcaccaggttccgcttcggtcctttgtccccggaccagatgatcccccgactg
gagcacgtgatccagcaggagagcatcgacatctctccggatggaatgaaggccgtagtg
aacctgtcgtcgggcgacatgaggagatcactcaacatactgcagagcaccacgatggcg
tacgggaaagtgacggaggacacggtgtacacctgcacgggacacccccgccgctcagac
atagccaacatcctggactggtgcctcaacaaagacttcaccacagcgtacaaccaaatc
ctgcagctgaagactctgaaaggtttggctctgcacgacatcctcaccgaggttcatctg
ctcgtacacagagtggactttcctccgatcatccgactcaatctgctcatcaagttagcc
gacatcgagcaccgactcgcctcgggaaccaacgagaagatccagctgagctccatggtg
gcagctttccaggccgtgagggacctggtggtcagcgaagcgtcctag

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