Mugil cephalus (flathead mullet): 125011844
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Entry
125011844 CDS
T08342
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125011844 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125011844 (lsm1)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125011844 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
125011844 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125011844
NCBI-ProteinID:
XP_047447219
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All DBs
Position
8:complement(18580275..18583314)
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AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTVLQQVSIEEILEEQRLQQQTKQETEKVKMQVLKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacggcaagcctcattgacgacatcgacaagaagcacctggtg
ctgctccgggatggaagaacactgatcgggttcctcagaagcattgatcagtttgccaat
ttagtttttcaccagacagttgagcgcatccacgtgggaaagaagtttggtgacatcccc
agaggaatattcatagtgagaggagaaaatgtggtccttctgggagagatagatgtggat
aagccctgcgacacagtccttcagcaggtctccatcgaagagattctggaggagcaacgg
ttgcagcagcaaaccaaacaggagacggagaaagtcaaaatgcaggtcctgaaggaccga
ggtctttccatacctaaagctgacaacttggatgaatactaa
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integrated database retrieval system
