Mugil cephalus (flathead mullet): 125011901
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Entry
125011901 CDS
T08342
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04145
Phagosome
mcep04510
Focal adhesion
mcep04512
ECM-receptor interaction
mcep04518
Integrin signaling
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125011901 (thbs4a)
04518 Integrin signaling
125011901 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125011901 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125011901 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125011901 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125011901 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcep04147
]
125011901 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
125011901 (thbs4a)
Membrane trafficking [BR:
mcep04131
]
Endocytosis
Phagocytosis
Opsonins
125011901 (thbs4a)
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125011901 (thbs4a)
Exosomal proteins of colorectal cancer cells
125011901 (thbs4a)
Exosomal proteins of bladder cancer cells
125011901 (thbs4a)
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125011901 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
EGF_MSP1_1
cEGF
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125011901
NCBI-ProteinID:
XP_047447366
LinkDB
All DBs
Position
8:complement(14630266..14638134)
Genome browser
AA seq
954 aa
AA seq
DB search
MMEMCVRAVALSLVLQQLVLAVTAEGMVYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSF
RLHSKAPTSLYSVINPKDNTKYLEFSVQAKLNKVTLRYQKSDGRFGTASFNHASLADGQE
HHVMLHASGLQRGPPRLNIYVDCRLAHSVADVPAAFGSLPPGPNKVALRTLQSSGQDELT
DLKLVIEDTIDNVATLQDCSMGQAESLQLLSVQRGRTVQDQATMSELKTMLSEMKELLHQ
QIKETTFLRNTIAECLACGLQGNPTNTGPAPHPQPKPLTQCPPGTCFRQNMCIPSELGGF
QCAPCPDGYTGDGVYCDDVDECQFNPCFPGVRCVNTAPGFRCEKCPLGYTGPELNGVGVS
YAKANKQVCEDIDECLNPPETGGCTPNSECFNSIGSYRCGECKAGFTGDQVRGCHGARLC
PNGQPNPCDTNAECVVERDGSISCVCGIGWAGNGYVCGRDTDIDAHPDNKLQCRDNSCKK
DNCKMVPNSGQEDADRDGMGDACDEDADNDGIVNLDDNCWLVPNVDQRNSDKDLHGDACD
NCRTVENPSQRDTDQDGLGDECDDDMDGDGLKNILDNCPRVPNIDQNDKDNDGVGDVCDS
CPDMANPNQSDSDDDLVGDTCDTNIDSDGDGHQNTKDNCPTVINSSQLDTDKDGLGDECD
DDDDNDGIPDDDDNCRLVPNPDQKDSNKDNVGDACEGDFDKDNVIDIIDHCPENAEVTLT
DFRAYQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFEGTFHVN
TVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSKTGPGEY
LRNSLWHTGNTPEQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGSTLVADT
SVIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPADYQDLPTAQTEIRDGV
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaatgtgtgtcagagcagtggctctgtctctggtgctgcagcagctggtgctc
gctgtcacagctgaaggcatggtctacgacctgctggtgtctccagactgcctgccagac
ctgctgcaaggaagcctgaagaacaaagggcgagatgaggctttcctcctctcgtccttc
aggctccacagcaaggcccccacttccctctacagcgtcatcaaccccaaagacaacacc
aagtacctggagttcagtgttcaggccaaactgaacaaagtgactctccgttaccagaag
tctgacggcaggtttggcaccgccagtttcaaccacgcatccctcgcagacgggcaggag
catcacgtgatgctgcacgccagcggcctacagcgcggcccgccccgcctcaacatctac
gtagactgtaggctggctcacagcgtggctgacgtgccggccgcgtttgggtcactccca
ccgggtcccaacaaggtggcacttaggaccctgcagtcgagcggacaggacgaactgacc
gacttgaagctggtgatagaagacaccatagacaatgtggccactctgcaggactgcagc
atgggccaggctgaatctctgcagctgctcagcgtgcagcgaggcaggacggtgcaagat
caggccactatgtcggagttgaagaccatgttatctgagatgaaggagttgctccaccag
cagattaaggagacgacatttctgaggaataccattgcggagtgtctggcctgcggactc
cagggcaatccaaccaacacaggtccagctccacatcctcagcctaaacctctgactcag
tgcccacctgggacctgtttcagacagaacatgtgcatcccttccgagttgggtggcttc
cagtgtgcaccctgtcctgatggatatacaggagatggggtatactgtgatgatgtagat
gagtgccagtttaatccatgcttccctggtgttcggtgtgtgaacactgctcctggtttt
cgatgtgagaagtgccctctgggatacactgggccagagttaaatggagtgggagtgtct
tatgctaaggcaaacaaacaggtgtgtgaagatatagatgagtgtctgaacccgcctgag
accggaggttgcacccccaactccgaatgcttcaacagtataggctcctaccgctgtgga
gagtgtaaagctggattcacgggtgaccaggtgagaggctgccacggtgccaggctttgc
cccaacggccaacccaacccctgtgacaccaacgcagagtgtgtcgtggaaagagacggt
agcattagctgtgtgtgtggcattggctgggccggcaatggctacgtgtgtgggagggac
acagatattgacgcgcatcctgacaataaactccagtgcagagacaactcctgtaagaag
gacaactgtaagatggtgccaaactccggccaagaggatgcagacagggacgggatgggt
gacgcctgcgatgaggatgcagacaatgacggcatcgtcaacttggatgataactgctgg
ctggttcctaatgtggaccagaggaacagtgacaaggatctccatggcgacgcttgtgac
aactgcaggacagtggaaaatccctcacagagggacacagatcaggatggtctgggagat
gaatgtgatgatgacatggacggagatggcttgaaaaatattctggacaactgcccacga
gtgcccaacatagaccagaatgataaagacaatgacggggtgggggatgtctgtgacagc
tgtcctgatatggccaaccctaaccagtccgactcagatgatgatcttgtaggagacacc
tgtgacaccaacatagacagtgatggagacggacatcaaaacacaaaagacaactgtccc
acggtcatcaactcctctcagctggacactgacaaggatggattgggagatgaatgtgac
gatgacgacgacaacgatggcataccggacgacgacgacaactgcagactcgttcccaac
ccagaccaaaaggactccaacaaggacaacgttggagacgcgtgtgaaggagactttgac
aaagacaatgtcattgacataattgaccactgtccggagaacgctgaagtcaccctgacc
gacttcagagcttatcagactgtggtgctggacccagagggagactctcagatagacccc
aactgggtggttctcaaccagggcatggagatagtccagaccatgaactctgaccctggt
ctcgctgtaggctacaaagcgttcagtggagttgactttgagggaaccttccacgtgaac
acagtgacagatgacgactacgctggcttcatcttcggataccaggactcctcctccttc
tatgtagtgatgtggaaacagaccgagcagacctactggcaggctgcgcccttcagggcc
gtcgctgagccgggaatacagctcaaggtggtgaagtctaagacgggccctggtgagtat
ctgaggaactccctgtggcacacaggaaacacccccgaacaggtacgtctcctgtggaaa
gaccccaggaacgtcggctggaaggacaaggtttcctaccgctggttcctccagcacaga
ccacaggttggatacatcagggctcgctttttcgagggttcaaccctggttgcggacaca
tcagtgatcattgacaccagtatgagaggcgggcgactgggcgtgttctgcttctcgcag
gaaaatatcatctggtccaacctgaagtaccgctgcaatgacacaattcccgccgactac
caggatctgcccacagcccagactgaaatcagagatggggtttaa
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