Mugil cephalus (flathead mullet): 125012032
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Entry
125012032 CDS
T08342
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125012032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125012032
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
Pre-60S particles
RNases
125012032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
RnfC_N
Motif
Other DBs
NCBI-GeneID:
125012032
NCBI-ProteinID:
XP_047447580
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All DBs
Position
8:2090246..2101248
Genome browser
AA seq
1038 aa
AA seq
DB search
MFPSSGLFADQHCPFTLRGLCERPHCLYKHAPEVLDAFGASCKSSIVEFAGLQNGRLYAA
RVKDETKDDCHHELERINKEIETVRNEMEQERRRLSRYQTVQSRNDPPVTDVAKTRRANK
YVVDNSKPRTDLEYDPLSNFSADLRSFSSSGKEQKVKRGNQAPRGRKVQLHPSPEPPDDE
DDVLIIDVPLSPEQQQQPPPPLSRCASKQISQDKLRNSEPASRILLDSTGSGEPAGFPTS
EPVVKKVSEAETLPAASVRPHHSWSSSSRVEEMNRQQTATKNSRHAKRAETKTQDKSLTV
HHRSSAPKPEPGASGSRAQSSSSSSSSSSSSERLFMTVDNEPVIIVDSSSEEEEEEFNYS
ELELSDSDPMEECYRIFMEANNEGKGHEEQPDASVVPVEKPELNVAPKELPMKKRVAHEA
KHTEQPVAKTRPQPQVLVPLRDPSGCGSRPKVQQVQQVQQVQQVQQVQHRASMLTASVKG
GQMFVSSTCQKRPDAQSGLSAATKPPEHLQPAPVQHAVNFFPLGTTVIDMGNNLHLILPE
GAFPLPVSSSSSPVTSVLTPITPVNNNTGSFAFRSSPHPPPVAPTQRYPSTAPVLIPAPA
RKPSLTSALASSPAASTTPPAAAKPTPVKRKLKQQQQQQRDAAKDKVPHNVRQRYVNMFT
EEFLKTSDNVNDAFTKALAEERTVYNRSVNKLKYQSVAVNALKRLKNQSAAAAKSENDVS
SQRLKGNIPLNPRKLKTSDDDATLYECLKDYVLTDEMLSEHNYPTEHPEKRGCAVVFADN
KKTNTDPFKRICCRCGATYSVSQTGKHTRKEECNYHYGRGVTKRVPGGVETRYSCCEGVM
GAPGCQVFKLHVHDSLSLDGFMSTVPRRPSDLSCPGVFSLDCEMCYTISGLELSRVTLVN
SRLEVVYDAFVKPDNEVIDYNTRFSGISEDDVEGNHTSLRDVQETLLSFIRADTVLIGHG
LETDLCLLKLLHATVVDTSVVFPHRLGPPHKLPLHHLTAEHLRRIIQESVCGHDTAEDAA
ACMELMLWKLKEDGKLKK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcctctggtctttttgccgaccaacactgccccttcaccctacgaggactt
tgcgagcgaccgcattgtttatacaaacatgccccggaagtgttggacgcgtttggtgcc
tcgtgtaaatcatcgatagtggagtttgcaggtcttcaaaatggccgcctttacgcagca
cgagttaaggacgagaccaaagacgactgccaccacgagctagagcgcatcaacaaggag
atagaaaccgtgaggaacgagatggagcaggagcggcgccgtctgtcgcgctaccagacg
gttcagagcagaaacgatccaccggttacagacgtcgctaagacgcgacgagccaacaag
tacgtggtcgacaactccaaacccaggaccgatttggagtacgaccctttgtccaacttt
tccgccgacttgcgctcgttcagctcgtcggggaaagagcagaaggtgaaaaggggaaac
caggcgccacgaggccgaaaggttcagcttcatccgtctccagagccgccggacgacgaa
gacgacgtcctgattatcgacgtccctctgtcgcctgagcagcagcagcagccgccgccg
ccgcttagtcgctgtgcatccaaacaaatatcacaggataaacttagaaactctgagcct
gcatcaaggattctcctcgactctaccggaagtggagaaccagccggcttcccgactagt
gaacccgtggtgaagaaagtctctgaagctgagactcttcctgcagcctcggtccgtcca
catcacagctggagcagcagcagtcgtgttgaggaaatgaatcgacagcagacggcgaca
aagaattcgagacacgccaagcgagcggagacgaagacgcaggataaatctttaaccgtt
caccacaggtcgtctgcaccaaagccagaaccaggagcttcaggttccagagctcagtca
tcttcatcttcatcatcatcatcgtcatcatctgagcgtctttttatgacggtggataat
gaaccggttataatagtcgactccagctctgaggaggaggaggaggagttcaactactcg
gagctggagctttcggatagtgaccctatggaggaatgttacaggatcttcatggaggcc
aacaatgaggggaagggacatgaagagcagcctgatgcctctgttgtgcctgtggagaag
cccgagctaaacgtcgcacccaaagaactgcccatgaagaagagagtggcccatgaagcc
aaacacacagagcagccggtggcgaagaccagacctcagccccaggtgttggttcctctc
cgtgacccgtctggatgtggctcccggccgaaggtccagcaggtccagcaggtccagcag
gtccagcaggtccagcaggtccagcacagggcctccatgctgactgcttccgtcaaagga
ggccagatgtttgtctcctccacctgtcagaagaggccggacgcccagagtggactttca
gctgcgactaaaccccccgaacacctgcagcctgctcctgtgcaacacgctgtgaacttc
tttcctttgggaaccaccgtcatcgacatgggcaacaatttacacctgatcctcccagaa
ggcgcttttccgcttcctgtctcctccagttccagccccgttacctcggtgttgactccg
atcactccagtcaacaacaacacgggatctttcgccttcagatcgtccccccatcctcct
ccggtcgcccccacgcagcgatacccctccacggccccggtgctcatccccgctccggcc
cggaaaccttccctgacctccgctttagcatcgagtccggccgcttccacgactcctccg
gctgcagcgaagccgacgcctgttaaacggaaactgaagcagcagcagcagcagcagcgc
gacgccgccaaagacaaagtccctcataacgtgcgccagcgctacgtcaacatgttcaca
gaggagttcctcaaaacgtccgacaacgttaacgacgccttcaccaaggctttagctgag
gaaagaaccgtgtacaatcgcagcgtcaacaaactcaagtatcagagcgtcgcagtgaac
gcgctgaagaggctgaagaaccaaagcgctgctgcagctaaaagtgaaaatgacgtgagc
agccagaggctgaaaggaaacatcccactgaacccgaggaagctgaagaccagcgatgat
gatgcgacgttgtacgagtgtttgaaggattatgttctgaccgatgaaatgttgagcgaa
cacaactaccccaccgagcacccggagaaacgaggctgcgccgtcgtcttcgccgacaac
aagaagaccaacacagacccatttaaaaggatctgctgtcgatgtggggcgacctactcc
gtgagtcagacggggaaacacactcgtaaagaggagtgtaactaccactacgggagagga
gtcaccaagagagtccccggtggagtggagacccgctacagctgctgtgagggggtgatg
ggagcccccgggtgtcaggtgtttaagctacatgtccacgactccctcagcctggacggc
ttcatgtccaccgtccccagacgtccttcagacctcagctgtcccggcgtgttctccctg
gactgtgagatgtgctacaccatcagcggtctggagctgtcccgagtgacgctggttaac
tccaggctggaagtcgtctatgacgccttcgttaaacctgataacgaggtcatcgactac
aacaccaggttttcaggcatcagtgaggacgacgtggagggaaaccacacgtccctcaga
gacgtccaggagaccttgttgagcttcatccgagcagacaccgttctgatcggacacggc
ctggaaacagacctctgtttactcaagctgctccatgcgacggtcgtggacacgtcggtg
gtcttcccccaccgcctgggccccccccacaagctgcccctccaccacctcacagctgaa
cacctgcggagaatcatccaggagagcgtttgtggccacgacacggcggaggacgccgcc
gcctgcatggagctgatgctgtggaagctcaaagaagatggaaaactgaaaaaataa
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