Mugil cephalus (flathead mullet): 125012111
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Entry
125012111 CDS
T08342
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125012111 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125012111 (thoc5)
03041 Spliceosome [BR:
mcep03041
]
125012111 (thoc5)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125012111 (thoc5)
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125012111 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
125012111
NCBI-ProteinID:
XP_047447752
LinkDB
All DBs
Position
8:14386804..14393726
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AA seq
684 aa
AA seq
DB search
MSSDTLKKRKSKVVRSEGGTPEMKRGRGDGDAQDVRVYSEEVELEGRDPEQDYTQYKESC
ESLATLMGEIQELKASGAKDGSVEVEQRRMQGCIHFMNLKKLNRLAHMRLKKGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYDEAPQEISRPHLT
KSDPHQLTLARLDWELEQRKRLAEKYKESQASKETIQKSIEVKKEHLSSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEVARHLPPPLYVLFVQANAYGQACDKSLIVSIRGDVEEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLGLDVKCKDGS
ILHLFFYYLMNLNIITVKTKVSTSTDLSTAISAGDLLKSDTLLSCLYTNDLGRETPNPAN
RYQFDKVGIVSFLDYVEELGHPYMWVQNLGGLQFPSDALESVRVVSTLSASHMENTMKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTMSHQEYMDLPYTRHV
TEAGLAKETDLYFMGVIERGTARLHSAVVLSPRYPEISPLFSLCLSWKGERNGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDGVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacactctgaagaagcggaagtcaaaggttgtccgcagtgaaggagggacc
ccggagatgaagcgaggtcgcggagatggggacgcacaggatgtgcgtgtatatagtgaa
gaggtggaactggaaggcagggaccctgaacaggactatacgcagtacaaagaatcatgt
gagagtttggccacgctcatgggcgaaatccaggagcttaaagccagcggggccaaggac
gggagtgtggaggtcgagcagagacgtatgcaaggctgcattcacttcatgaatctgaaa
aaactcaaccgcttggctcatatgcgactaaagaaaggcagagaccagacacatgaggca
aagcaaaaagtggatgtgctgcatcttcagctacaaaacctgctgtatgaggttatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcacgaagaaatagacctg
gtgagtgaagaagagttttacgatgaggcacctcaggaaatttccaggcctcacctgaca
aaaagtgatccgcaccaactcacgctggcacgactggactgggagctggaacagagaaag
aggttggctgagaaatacaaggagtcccaggcctcaaaggaaaccattcaaaagagcatc
gaggtgaagaaggagcatctgtccagcttgcagccaggactcaatgccatcatgcaggcc
tcactcccagtgcaggagtatctgtccatgccctttgaacagactcagaaacagactgag
gtcgcacgtcacctgcctccacctctctacgtcctctttgttcaagcaaatgcctatggt
caggcctgtgacaagagcctgattgtctcaatcagaggggatgtggaggaagccaaggct
ctttccaaacctccggaggattctcaggatgatgaaagtgattccgatgcagaagaggag
caagagaaaacgaagagaagaagaccaactacaggcggccaactggatgacaaaagacga
gagatgttgaaaaggcaccctctgtctcttggcttggacgtgaagtgtaaagatggcagc
atactccatctcttcttctactacctgatgaatctgaacattatcacggtgaagaccaag
gtctccacctccacggacctcagcacagccatcagcgcgggggacctgctgaagtcagac
actctcctcagctgtctctacaccaacgacctgggacgagaaacgcccaatccagctaat
cgctaccagtttgataaagtcgggattgtttcctttctggattatgtggaggagctcggc
cacccctacatgtgggttcagaacctcggaggactacagtttcccagcgatgctttagag
agtgtgcgtgtggtcagtactctgagcgccagccacatggagaacactatgaagctgctg
agaggacgagtccagtcccgcttggctttgcacaaacagtttgcctctttagagcacagc
atcatccccgtctccagtgagtgtcagcacctgtttcctgccaagatcatctcccgttta
gctcgatggaccactatgagtcaccaggagtacatggatctgccatatacacgtcacgtg
acggaggctggtctggcgaaggagactgatctgtatttcatgggagttatcgaaagaggc
acagctcgcctccactctgctgttgtgctgagccctcgttacccagagatctctcctctt
ttctcgctctgcctcagctggaaaggagagcgcaatggacgcactgatgacaacctcagg
gccatggagagcgaagtcaatgtgttcaaaaatgaactgcagggcccacgtcctggacac
cagctcctgaccaatcagatatcccgcctgtgcgtctgcctggatgtgtatttggagaca
gaaggacaggatgacggcgtggaaggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggtccaaaccgtctgaagccgttcaagtacaaccatcctcagggtttt
ttcagtcatcgctga
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