Mugil cephalus (flathead mullet): 125012114
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Entry
125012114 CDS
T08342
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125012114
03041 Spliceosome [BR:
mcep03041
]
125012114
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125012114
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125012114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
DUF1866
Motif
Other DBs
NCBI-GeneID:
125012114
NCBI-ProteinID:
XP_047447756
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All DBs
Position
8:complement(22814098..22824696)
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AA seq
387 aa
AA seq
DB search
MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYENNSKHLSFDEVVSQSSPSNCTVYCGGVSTGLTEQLMRQTFSSFGQIMEVRVFPDKG
YSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMSVPQQNKMGFAAA
QPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGG
VMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatcaacccagaaccttgtacgtggggaatctgtccagggatgtcacc
gagcccctcatcctgcaggtcttcacacagataggaccctgcaagagctgtaaaatgata
gttgatacggctggaaatgatccgtactgttttgtggagttctatgaccacaggcatgct
gctgcctcattggcagccatgaatggaaggaaaataatgggtaaggaagtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcactttcacgtttttgtc
ggagacctcagcccagaaataaccacagaagatgtcaaagctgcctttggtccatttggc
aggatatcagatgctcgggttgtgaaagacatggctacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagaaaacgccattcaacaaatggggggtcag
tggttaggaggcagacagattcgaactaactgggccacaagaaagcctcccgccccaaag
actacctatgaaaataactccaagcacctatcctttgacgaagtagtgagtcagtccagc
cccagtaactgcaccgtgtactgtggtggagtcagcacaggactgacagagcaactgatg
agacagaccttctcctcctttggacaaatcatggaagtcagagtttttccagacaaaggt
tattcatttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaat
ggctcttcaatagagggccacatagtcaaatgctactggggtaaagagaccccggacatg
atgaactcaatgcagcagatgtctgtgccccagcagaacaagatgggcttcgctgcagct
cagccctatggccagtggggccagtggtacggcaacgggccccagatcagccagtacgtc
ccgaatgggtggcaggtccccacctacggtgtttatggccaggcttggaaccagcagggc
ttcaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggg
gttatggagcctacacagggattgaatgggagtatgctagccaaccagccaggtatggga
gccgcaggataccccacacactga
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