Mugil cephalus (flathead mullet): 125012157
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Entry
125012157 CDS
T08342
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125012157 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125012157 (usp39)
Spliceosome [BR:
mcep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
125012157 (usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125012157
NCBI-ProteinID:
XP_047447888
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Position
8:13231317..13235250
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AA seq
500 aa
AA seq
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MVSLKREREVDVDDDDNEDEVATKIGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLPP
EEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEA
YIQIWKRQQSDDDTNNHMGE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcttaagcgagaaagagaggtcgatgtggacgatgacgacaatgaagacgaa
gtggcaaccaaaataggacggggacgtgtagtagaagacagaagaagccggcactgtcct
tatcttgacaccattaacaggagcgtgctggactttgactttgagaaactctgctccatc
tctctctcccacatcaatgtctacgcctgccttatatgtggaaaatactttcaaggtaga
ggtctgaagtctcacgcgtacactcacagtgttcagtttacacatcatgtgttcctcaat
ctgcacacactcaagttttactgtctgccagacaactatgagatcattgactcatcacta
gaagacataacatacgtgttgaagccaactttcaccaagcagcacatttcaggactggac
aagcagggtaaactgtaccgagcctacgatggtacaacctacttgccggggatcgtaggg
ctcaacaacatcaaagccaatgactatgccaatgttgtgttacaggcgttttccaatgtg
ccacctttgcgaaactacttcctggaggaggagaactacagagggatccgcaggccacct
ggggacatcatgtttctcttggtgcagaggttcggcgaactgatgcgcaagctttggaat
ccgcgaaacttcaaggctcacgtgtccccgcatgagatgctgcaggctgtggtgctgtgc
agcaagaagaacttccaaatcaccaagcaaggagatgctgtggacttcatgacatggttc
ttgaacgctctgcatggtgcacttggaggcacaaagaaaaagccatcgatcatcacaaaa
gcatttcaaggctctatgcggatattctccaagaaacttcctcacccagatttaccacca
gaggaaaaagaggctttgcttgtgacagaggagtaccaggagcagatgtccgagtccact
ttcctgtttctgaccctcgacctcccaactgctccactgtacaaggatgagaaggagcag
cttatcatcccgcaggtccctctcttcaacattctgggcaagttcaatggcagcacagag
aaggaatacaaaacctacaaagagaattttctcaaaaggttccagttgaccaaactgcct
ccgtacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaac
cccaccattgtcaacttccctatcacgaatgtagatcttcgtgagtacttgacagaagaa
gctcaagctacggagaagaacacgacttatgatcttgttgcaaacgtagtgcatgatggg
aaacctactgaaggagcgtacaggatacatgttctgcatcatggtactgggaagtggtac
gagatgcaggacctgcaggtgatcgacattctcccacagatgatcacgctgtcagaggct
tacatccagatctggaagagacaacagagtgacgatgacacaaacaaccacatgggggag
taa
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