Mugil cephalus (flathead mullet): 125012446
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Entry
125012446 CDS
T08342
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125012446 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcep02000
]
125012446 (tmc1)
03037 Cilium and associated proteins [BR:
mcep03037
]
125012446 (tmc1)
Transporters [BR:
mcep02000
]
Other transporters
Pores ion channels [TC:
1
]
125012446 (tmc1)
Cilium and associated proteins [BR:
mcep03037
]
Other cilia and associated proteins
Stereociliary proteins
125012446 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
125012446
NCBI-ProteinID:
XP_047448365
LinkDB
All DBs
Position
8:complement(18785953..18793949)
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AA seq
967 aa
AA seq
DB search
MPRDSLITSEDDIDIGLDFTGDEDEEGDERGRRKGKRKNSDREKRKRGRARRKGASRAGD
GEERSEVRREKRERGRRRRAKDNDEAEGIEKEEETQTSGKVAKKGKNIKNKKTRKMEEEE
DEEEERIEKRKKKRGSTKKEEKENVAKHKVKEKTQGVKRKKSKKVVETSSDQETSEEEDN
EEEDKKEQPNEDKEWRPECLTPEQLEQLKEAVDERKKLIQSLRGKPWPMKKKLVTLRESQ
EFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSS
VASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRTEETSAMDFAVLW
DFGGYAKYSVLFYGYYNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESG
VGDDNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFL
RVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLDNHTWWERNEVNMVMSLLGMFCPMLF
DVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNITMWED
SFYNGTVLENSTAPPMTIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRA
VLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHV
SMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVSIPPSFDCGPF
SGKNRMFDVIQETLESDFPAWFGKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEAN
VELKKKLQTQNEENKKKNKRAALKAQMDLEEARKAAAQSSEQQKNNNASLQGRESDVEEN
HGRTQRLCHGKNRHNPPPPAGERERHLATRGPVPRTYHHGNHHGAPGHLPGFSGEPRMHR
APSLQRH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacagtctgatcacctctgaggatgacattgacattggactggatttcaca
ggcgacgaggatgaagagggagatgaaaggggaagacgcaaagggaaaagaaaaaacagt
gacagagagaaaaggaagaggggaagagcgagaagaaaaggtgcatctagagcaggagat
ggagaggagagatcagaggtcaggcgcgagaaaagagaacggggcaggagaagaagagca
aaagataacgatgaagcagaaggaatagagaaggaggaggagacgcaaacgagtggcaag
gtggcaaaaaaagggaagaatatcaaaaataaaaaaactcgaaaaatggaggaggaagag
gatgaggaagaagagagaattgaaaagagaaaaaagaaacgtggaagcaccaaaaaagag
gagaaggagaatgtagctaaacataaggtaaaggagaaaactcagggagtgaagaggaaa
aagagcaagaaagttgttgaaacaagttcagaccaggaaacaagtgaagaagaggacaac
gaggaagaagacaagaaggaacaacccaatgaggacaaagagtggaggccagagtgtctt
acaccggagcagctggagcagctgaaggaggctgtggatgagaggaagaaactgatccaa
agtctgaggggaaaaccctggccaatgaaaaagaaacttgtcactttacgggagtctcaa
gagtttgtggagaaatatgagggagccttgggcaaagggaaaggccggaagctctatgca
tacaaagtcatgatgactaagaaatggatgaagttccaacgggactttgaaaacttcaaa
actgcctgcatcccgtgggagatgaaaataaaagagattgaaagtcattttgggtcatcg
gttgcctcgtactttattttcctgaggtggatgtatggcatcaacatgatcttgtttggt
ttgacctttggactcgttatggtaccagaggccttaatgggacgtccttatggtagcatc
ccaagaaagactgtccccaggactgaggagaccagcgctatggactttgctgttctatgg
gactttgggggctatgctaagtattcagtcctcttctatggctactacaacaaccagcga
gccattggctggcttaagttccgtatgcctttgtcgtacttcctggttggtgtgggtaca
gtggcttatagctatatggtggtcataagaacgatggcccgcaacgcaaatgaatctggg
gttggagatgataacagcttcaatttcagctggaagatgttcaccagctgggactacctg
ataggaaaccctgagactgcagataataagttcgcctccatcaccacaagcttcaaggag
gcgatcttagaagagcaagagagccgcaaagatgacaacatccacctgactcgtttcctg
cgggtgttagccaacttcctggtgttgtgttgtttggcaggaagtgggtacctcatctac
tttgtagtgcgccgctctcagaagtttgccctagatggactggataatcacacctggtgg
gaaaggaatgaggtgaatatggtgatgtctttgctggggatgttctgccccatgctgttt
gacgtcatcagcaccctggaaaactaccatccccgcgtcgccctgcagtggcagctgggt
cgcatctttgccctcttcctgggaaacctctacaccttcatcatcgcactcatggatgag
atcaaccttaaaagggaagaagagaagatagtcaagtttaatataaccatgtgggaggac
agtttttataatggcacagtattggaaaacagcaccgcaccgcccatgactatccaccct
gctgatgtgcccagagggccctgctgggagaccatggtggggcaggagtttgtccggctg
atcatatctgacaccatgacaacctacatcacactgctgattggtgacttcctgagagct
gttcttgttcgttttctcaactactgctggtgttgggaccttgaggctggatttccttcc
tactctgagtttgatgtcagtgggaacgttctgggcctgatctttaatcaaggaatgata
tggatgggtgctttctacgccccttgtctgcctgctctgaatgtcctccggctccatgtg
tccatgtacctgcagtgttgggcagtgatgtgctgtaacgtgccccaggagcgggtcttc
aaggcttctggctccaacaacttctacatggccatgttgctagtcatcctctttctgtcc
actctgcctgccatctacaccatcgtctccatccccccctccttcgactgtggaccgttc
agtggcaagaaccgtatgtttgatgtgatacaagagactctggagtccgacttccctgcc
tggtttggtaaagtgttcagctacgcctctaaccccgggctggtgctacccttcattttg
cttatggtgctggccatttattatttgcaatccacatccaaaagctacaaggaagctaac
gttgagctgaagaaaaagctacaaacgcaaaatgaggaaaacaagaagaagaacaaacgt
gcagcactaaaggcgcaaatggatctagaggaagcaagaaaagcagcagcacagtcatca
gagcaacaaaagaacaacaacgcttccttacaaggtagagagtctgatgttgaagaaaac
cacggccgcactcagaggttgtgtcacggtaagaacagacacaaccctcctccccctgct
ggagagcgagagcgacacctggccaccagaggccccgttcctagaacatatcaccatggc
aaccaccacggggctcctgggcacctgcctggtttctcgggtgaacccaggatgcacagg
gcaccgagcctccagagacactga
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