Mugil cephalus (flathead mullet): 125012707
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Entry
125012707 CDS
T08342
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125012707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125012707
Membrane trafficking [BR:
mcep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125012707
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125012707
RAVE complex
125012707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
NBCH_WD40
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
125012707
NCBI-ProteinID:
XP_047448756
LinkDB
All DBs
Position
8:8756826..8806440
Genome browser
AA seq
3105 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLTKLSCQWQKTGQFVLQSMVRNLAW
HPTGGMLLTGSTSLQLWSNVDVAKDEAEERGKQTETTPRDSQAAWRCIWQSKTASPVSLM
KFSPDGEFFATAGLDDCLVKVWYSTSKWKSGVSRLFTPPEPGMSVQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSGHYDSLISGQPGE
TLRCAGPPRQNSCNGKMQGRTSQDLNFQESWHSSYNRDVPVPSLTGCLPHHQSRHNNHKT
SGNSLPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELHFT
LAMEVFLQPLRSSLDQQNECSSEEAEDEDNFEEDNGSRPRDAQGLEAAELPVAAVEHQVD
VLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAI
SLSHSVVMYACNKNVDLAIQHGRQRPPGNALSQTKSALISYGGQGKAAPSSSLRLSIFTP
NVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT
SHHNALRTPEADSILAPPEACSSGFFPSSSLGRGSRPSRVSLGAVSQDPNAIYSELILWR
VDPVGPLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGAYCNSPSACFVASDGQS
LRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDSITDFQGKETQL
LHVFEEDLILGSERTESAQETPDSPRNASPAPTFSARFFLVVVELTPTGRSLLHMWHLHL
AAQPVTMEETTTQKDLNNSQSQFIFDTLSSPITQKSKPCTSNLQSACRLSLSTHRLYSQE
MALPEGVEAVSVTPSAGHLSASCSLPADRVPYLLATSCSDGKVRFWKCNVVATQPSGMDN
LEYQWEEWHLLVEERLPSSSAVSVPGRPIEVSCCHTGRIAVAYRQMPNTPLNSSPHLSSH
GLLTSPPALSSSPYVSYNNTNTHLTPSLTVQHSPNLSLSPNPPNTREPLVHIGIFQCEST
GGSQWILEQTIVLDGTDPAANYAVSSSLTGSASIPNNMDFSIPNENCLGSTTKSLVHLDW
VSQEDGSHVLTVGIGTKIYMYGRLSGKPPELGMSSDASRDQSMSRLVLLRSVNLVSSVEG
SLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPTPPKPGITVGQDADIGSSFSSIISAVR
QEEGLSSGAPTSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPT
LPQYHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSSSNAEKRVRSRTISAGGS
TARDPKMFSKSEKSSLDYTEISSVPPLPLYALLAADEDTPKPDKVGSVSGDSGHGSSHTD
AYDELFHTPNIVDLDPLDSDQEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLT
RMEQMSLMALADTIATTSTDLKDIQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHR
AQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRC
IEKVAKASFQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAA
LKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETASTY
KKILQRHVLGQDKQIPAHQDPFLRSVAHWVLEDYSKALDTLLEQSTNSSRSTESKADAGS
SFVSTCNPEVFNFYIYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLDERRLFFTAA
YAHLHAGCPMLALEVLSKMPKVRKHSKLPSQGDTGITAELSVGSGTGRASDPDWSQPALN
GYESDGNSLSNSQSDSVLSFDWSQPSLTLPDEPLELKWDSDKDDEDVDEDEEETKNDKSG
RTADSGSVFQDTQDAMSTLTEAGTVEDGDDFIAPTGDILVAQLKFTACLKIMTNELRTLS
TGYELDGGKLRYQLYQWLEREVVALQRCCSYKPCLPELSVQGDSGLVEEEQPRSPSGDSQ
RSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSIQSGVTLSSQ
PTSIPLLMACTANVKTVVANPIVYLTNLTHDILQTINALDSPPHPDVVNNEIYVLHTLAA
SLSACIYQCLCDGHTYSHVNNFTGTVYQSVLLSQKQPLKTVSMDESVQPNTSPAQWPGIA
SLVRLLSSAGEESQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNGKLWVT
VFGGGARTPVIEKPSSPARTPPPASPCGSDRKSRRFRLLSSRSASKDKDESGIEREGPSS
PKHVPVVEQEAASIFKERFVPPELSIWDYFIAKPLLPPSESRIEYDSEESQGSQDEDDDD
NEYEDVFDPNSPQREHSNHNSYSWCLMRLAMVQLVLTNLKSFYPMAGYDLLDLPVGSPLC
HTVLKTLQRWEQVLQKRLEIFGGPPSKYISTHLHDDVSTPGPALLRHKALFEPSNTPFRT
SHHSALPVKRLWQFLVKQEEVQETFIRNIFTKKPGTNQSVEDRVDNMKCSGMDETGNNQT
ESDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWID
DDEAEGKGAGGDDFLVIHTRDDFAALHGTTPYTHSTPGTPINVPWLGGLQTGRGAAVMIK
RNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNK
FGIVDADGGLSLWQTNTSGNTPKPYLTLHCHNKTAHDFVFVGSSSLIATAGLSTDNRNVC
LWDTLVTPANSLVHAFCCHESGATVLSVAPRQQLLITGGRKGWISVLELPHRQQRQSFQA
HDSPVKALAVDPTEDCFISGSAEGNIKIWSLATQCVLHTFPNEHARQSLFRNLGTGVMQI
EVGPANHIFSCGADGTMKMRILPNRFSVVNNNNHGNLKNDVKFII
NT seq
9318 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcatcaagtcctcacgggggccgtcaaccctggtgacaattgtttctctgtg
ggaagtgtcaacaatgtgccattcacggcctacgcttcagggtgtgacgtggtgattttg
ggcagtgattttgagcggctgcagatcatcccgggggccaaacatggcaacatccaggtc
ggctgtgtggactgctcactgcaggggggacagattgcagcttcctatggaagcatcgtg
tgtgtctttgagcccgttcagcacccagatcaaaaagacacatcgctgactaaattgagc
tgccagtggcagaagacgggtcagtttgtgttgcagtcgatggtacggaacctggcctgg
caccccacaggcggcatgctcctaacaggctctaccagcctccagttgtggtcgaatgtt
gatgtggcaaaggatgaagctgaagaacgggggaagcagacagaaacgaccccaagagat
tctcaggctgcctggaggtgcatctggcagagcaagacggcttctccagtcagtttaatg
aagttctctcctgacggtgaattctttgctactgctgggctggacgactgcctcgtcaag
gtgtggtacagcaccagtaagtggaagtcgggcgtttccaggctcttcacacctccagag
cccggtatgagtgtccaaggagagctggccttttccttcgtctacctggcccatccacgt
tctgttacaggtttctcctggaggaaaaccagcaagtacatgccaagaggtgcagtgtgt
aatgtcctgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacgctgttg
ccaggtgacagcctcctctctggtcactatgacagcttgatttccggacaacccggcgaa
acgctcagatgtgccgggcccccgaggcaaaacagctgcaatgggaagatgcaaggacgg
acatcacaagacttgaattttcaagaatcgtggcattcctcctacaaccgggacgtgccc
gttccgtctctgaccggctgcctgcctcaccatcagagccggcacaataaccacaagacg
agcggcaacagcttgccccacgccaacgccctctgccacttccacatcgctgccagcatc
aaccctgcaacagacattcctttgctaccctccatctcctccctgagtgctgtggatgac
gaggagccgggcggcccattcaccgtccactggctgaacaacaaagagcttcacttcact
ttagccatggaagtcttcctgcagccgctcagaagcagcctggaccaacagaacgaatgc
tccagcgaagaagccgaagatgaagataactttgaggaagacaacggtagcaggccaagg
gatgcacaagggcttgaagctgcagagcttcccgtggctgcggtggagcaccaggtggat
gtgctgttagaggagtggaataaaggggctgacatgctgttcagtatacaccccatggat
ggctctttgttagtctggcatgtggactggctagatgaataccagccagggatgttcagg
caagcccaggtatcgtttgtgtcccgtatccccgtagcattccccacaggcgacgccatc
tccctgagccacagcgtggttatgtacgcctgcaataagaacgtggatctggctatccaa
cacggcagacagcggcctcctgggaacgcgttgtcgcagaccaaatctgctctaataagc
tacgggggtcagggaaaagccgcgcccagcagcagccttcgactgagcattttcaccccc
aacgtcctcatgatctccaaacacgccgacggctctctgaaccagtgggcggtcagcttt
gccgaagactcggctttctccaccgtgctcagcgtgtctcacaagtcccggtactgtggc
caccgcttccacctcaatgacctggcctgtcactcgttactccctctcctcctcaccacc
tcgcaccacaatgccttgaggacgccagaggcggacagtatcctagcgcctccggaggcc
tgctcctctggcttctttccttcctcgtccctgggccgtgggtcgcggcccagccgggtg
tccctgggtgcggtttcccaggaccccaacgccatctacagcgagctgattttgtggaga
gtggaccccgtcggcccgctgtctctgtcgggcggggtctccgagctagctagaatcaat
tctctccacgcttcagcgttcgctaatgtagcctggttgcccacgctcattcccagcagc
tgtttaggtgcgtactgtaactcccccagcgcctgcttcgtggcaagtgacggccagtca
ctcaggctctatcaggctgttattgaagctaagaagctgctgagtgagctctccaatcct
gaaatatcaaaatatgttggagaagtgttcaacatcatcagccagcagtccacagctaaa
ccagggtgtattatagagctggattccataacggactttcaggggaaggagacccagctc
ctgcatgtttttgaagaggatctgatcctcggcagcgagagaacagagagcgcacaggaa
actcctgattctcctcgtaatgcctctccagcgccaaccttctcggctcgtttttttctg
gtggtggtggaattaaccccgacgggccgctcactcctccacatgtggcatctccacctc
gctgctcagcccgtcaccatggaggaaaccacgacgcagaaggatctgaacaactcccaa
tcccaatttatcttcgacaccctcagttccccaataactcagaagagtaaaccctgcact
tccaacctgcagagcgcctgtcgcctcagcctctcgacacacaggctctacagccaagag
atggctcttccagaaggcgtggaagccgtcagtgttactccctcggcaggtcacttgagc
gcatcgtgttcgctgcctgccgaccgcgtgccttacctccttgccacttcctgctccgat
ggaaaggtgcgcttctggaagtgtaacgtcgttgcgacgcagccctccggtatggacaac
ttggagtaccagtgggaggagtggcatctcctggtggaggaaaggcttcccagcagcagt
gcggtaagcgtgccaggtcgccccatagaggtgagctgctgtcacaccggacggattgcg
gttgcctacaggcagatgccaaacacacctctgaactcctcgcctcacctgagctctcac
gggctgctcacgtctcctcccgctttgtcatcctctccttatgtaagttataacaacacc
aacacgcacctgaccccgagcctaaccgtacagcacagccccaacctcagcctgagcccc
aacccaccaaacactagagaacctctggttcacattggcattttccagtgcgagtccacc
ggtggctcacagtggatcctagagcagaccatagtgttggacggcacggatcctgcagct
aactacgccgttagcagtagtttgactggaagcgccagtattcccaataacatggacttc
tctatacctaacgagaactgtcttggttccaccactaagagcttggtacacttggactgg
gtctcccaagaggacgggtcacacgttctcactgttggtattgggacaaagatttatatg
tatggccgtctatctgggaaacctccagaactgggcatgtcctccgacgccagtagagac
caaagcatgtctcgcctagttctgcttcgatcggtcaacctggtgtcctccgttgagggc
tcgttgcctatcccggtctccctctcctgggtacgagatgggatcttggtggtaggcatg
gactgtgagatgcacgtctactctcagtggcagccccccactccgcccaagcccggcatc
acggtcggccaagacgccgacatcggcagcagcttttcctccatcatttcagccgtcagg
caggaggaggggctcagctccggggccccgacgtcttcgctggctcctccgaaaaaggcc
ctgaccagatcgatgatgagcctggctcagaaactcagcgggaagagaacggcttatgac
ctaccagtagagatggaggactcaggactgtttgaagctgctcaccaactgtttcccact
ctaccccagtaccatcctgtacagttactggagcttatggaccttgggaaggttcaccgt
gccaaagccatcctctcccacctggtcaagtgcattgctggagaaattgtggccctcaaa
gacagcagcagcaatgcagagaaacgtgtgcgctctcgaaccatcagcgctggaggcagc
acggccagggacccaaagatgttcagcaaatcggagaagtcctcgcttgactacacggag
atcagctccgtccctcccctgcccctgtacgccctccttgccgctgatgaggatacacca
aaacctgataaagtcggcagcgtgagtggcgatagtgggcacggttccagtcacacagat
gcttatgatgagctctttcacacgcccaacattgtggacctggaccctctggacagtgat
caggaggaaaccgggaataaggttatagacctgtcacagtacagtccaacgtattttggc
ccagaacacgcccaggttctgtccagccacctcctccactccagtttgccaggattaact
cgaatggagcagatgtctctcatggctctggccgacaccattgctaccacaagcacagac
ctcaaagacatccagggcaagagcaaagggggagagacgctggatgagtgtggcttgaag
ttcttgctggctgtcagactccataccttcctctcgacctctctgcctccagcacacaga
gcacagctgctacgtcaaggcctgtcaacgtgtcactatgcctgggccttccactctgaa
gctgaggaggagctgctgaacatgctacctgccctgcagaagggagagcccacctggccc
gagttgcgctctatgggcgtaggttggtggctgcgcagcaccaacaagctacgcaggtgc
atcgagaaggttgccaaggcttcttttcagagaaacaatgatcctctggatgcagctata
ttttaccttgcactgaaaaagaaggcagtggtttggggattgtacaggtctcagaagaac
gctaaaatgacagagtttttccgcaacaacttcagcgaggatcggtggaggaaagcagcg
ctgaaaaatgcgttttctctgttgggaaagcagcggttccagcattctgcagccttcttt
cttctcgccggctcccttaaggatgctgtggaggtatgcttagaaaaaatgcaggacctg
cagctggcgcttgtgatctccagattgtatgagtcagagtttgagacggcatccacctac
aaaaagatcctccagagacacgttttgggacaagacaaacagattccagcccaccaggac
ccgttcctgcggagcgtggctcattgggtcctggaggactacagtaaagctttagacact
ctacttgagcagtctactaacagctccaggtccactgagagcaaagctgatgctggttcc
tcttttgtgtctacatgcaaccctgaggttttcaacttttacatctacctccgcacgcac
ccgctcctcctccgccgacatttcggctcttcggacaaagccaaagtcggcctgacggcc
gagggtcgcagggctgactccatcagcctggacgagagacggctgtttttcaccgcggcg
tacgctcacctgcacgctggctgccccatgctggcgctcgaagtcctctccaagatgccc
aaagtccgcaaacattccaagctccccagccagggggatacaggcatcactgcagagctc
agcgttgggagcggcaccggacgggcgtcggacccggactggtcgcagccggctctgaac
ggctacgagtcagacggaaacagcctgtccaacagccagtcagattcagtattgagcttt
gactggagccagccgtccctgacgcttccggacgagcccctggagctgaagtgggacagc
gacaaagacgacgaagacgtcgacgaggacgaagaagaaaccaaaaacgacaagagtggt
agaactgcggacagcggcagcgtgttccaggacacgcaggacgccatgtcgacgctgacg
gaggccgggacggtagaggacggcgatgatttcatcgcaccaactggtgacatcttggtg
gcccagctgaagttcaccgcctgtttgaagatcatgaccaatgagctccggacgctgtca
acagggtatgaactggacggagggaaactgcgctaccagctctaccagtggttagaaaga
gaggtggtggctcttcagcgctgctgcagctataagccttgcctgccagagctgtctgtc
cagggtgattctgggctggtggaggaggaacagcccaggagtcccagtggtgacagccag
cggagcaggagacactggctgcaaagtaaccagcctttactgaggatgttcctcagctac
tgcagcttgcacggctcccacggcggaggactggcttcggtgcgcatggagctcatactg
ctgctccaagagtctcaccaggacgactccatccagtcgggcgtgactctgagctctcag
cccacctctatccctcttctgatggcctgcacagccaacgtgaagaccgtggtggccaat
cccatcgtctacctgaccaacctgactcacgacatcttgcagaccatcaatgcactggac
tctcctccgcatcccgatgttgtgaacaacgagatctatgtgttgcacacactggctgcc
tccttgtctgcttgcatataccagtgtctgtgtgatggacacacctatagccacgtgaac
aatttcacagggactgtgtatcagagtgttttgctgtctcagaagcagccgctcaaaacc
gtcagcatggacgaatctgttcagcccaacacgtctcctgcacagtggccgggtattgct
tcgctggtccgcctgttgagctcagcgggcgaggagagccagccgggcttagctgtgctc
ctctgtgagatcctgacggctgtcttcctcagtctgtttgttcacggcatggccactcac
tccagcaacgagctgtttcgcatcgtggctcacccactcaacggcaagctctgggtgaca
gtgttcggaggaggcgctcgcacccctgtcatcgagaaacccagcagcccggcaagaacc
cccccgccagcttcaccgtgcggctcagacaggaagtccaggcggttcaggcttctctcg
tcacgcagcgcttctaaggataaggacgagtctgggatagagcgggaggggccgtccagc
cctaagcacgtccccgtcgtggaacaggaagccgcctccatttttaaagagcggttcgtc
cctccggagctcagcatttgggattatttcatcgccaagcctttacttccaccatcggaa
agcagaattgaatacgactcagaggagagccagggcagccaagatgaggacgatgacgac
aatgaatacgaagatgtgtttgaccccaactctccgcaaagggagcattccaaccacaat
tcgtacagttggtgtttgatgcgtctggccatggttcagctggtgctgaccaacctcaag
tccttctacccgatggcaggatatgatcttttagatcttcccgtgggctcccctctgtgc
cacactgtgctgaagacgctgcagcgctgggaacaggtgctgcagaaaaggctggagatc
ttcgggggccccccttccaagtacatctccacccacctccacgatgacgtgtccacacct
ggtcccgcgctgctcaggcacaaggccttgtttgagccatccaacaccccgttcaggact
agccaccactcagcgctgccagtgaaacgtttgtggcagtttctggtcaagcaggaagag
gtgcaggagaccttcattagaaacatcttcaccaagaaacccggcacaaaccagtcggtt
gaggaccgggtggataatatgaaatgttcagggatggacgagacaggaaacaatcagacc
gagtcggatctgggcagccctggaggaaaagcgcgcatcatccacaaggagtctgacatc
atcacagcctttgccatcaacaaggcgaatcgtaattgtttagtcatggcctccacccat
gacattcaggagttggatgtgtcatccatcttggccacacagatcttgacatggattgat
gatgatgaggcagaaggcaaaggcgccggcggcgacgacttcctggtgatccacacgcgc
gacgacttcgccgccctccacggcaccacgccgtacacccacagtacccccggcacgccc
atcaacgtgccctggctgggaggcctgcagacgggcaggggtgcagctgtgatgatcaag
cgaaatatcaataatgtgagaagaatgacctcccatcccacgctgccatactacctgacg
ggggctcaggacggcagcgtgcgtatgttcgagtggggtcactcccagcagatcatctgc
ttcagaagtccgggcaactccagagtcaccaggatacgattcaaccaccaaggaaacaag
tttggtattgtagatgctgatggaggtttgagtctttggcaaaccaacaccagtgggaat
acacccaaaccgtacctgactctccactgccacaacaagacggctcacgactttgtcttc
gtgggctcttcctccctcatcgccacagcaggactttcaacagacaacaggaacgtgtgt
ctgtgggacactctggtgactcctgctaacagcctcgtacacgctttctgctgccatgag
tctggtgccaccgtgctctcagtggcccccaggcagcagctgcttatcacaggtgggagg
aagggctggatcagcgtcttggagctgccccacaggcagcagcggcagagcttccaggcc
catgactcaccagtcaaagctctggctgtcgatccaaccgaggactgctttatcagcgga
tctgcagagggcaacattaagatctggagcctggccacgcagtgcgtcctccacaccttt
ccgaacgagcacgctcgccagtcgctcttcaggaacctcggcacgggcgtcatgcagata
gaggtgggaccggccaatcacatcttctcctgcggcgcagacgggaccatgaagatgagg
atcctccccaaccgcttcagcgttgtgaacaacaacaaccacggcaacctcaagaacgat
gtcaagttcatcatatag
DBGET
integrated database retrieval system