Mugil cephalus (flathead mullet): 125012737
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Entry
125012737 CDS
T08342
Symbol
polE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03030
DNA replication
mcep03410
Base excision repair
mcep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125012737 (polE)
03410 Base excision repair
125012737 (polE)
03420 Nucleotide excision repair
125012737 (polE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcep03032
]
125012737 (polE)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125012737 (polE)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125012737 (polE)
DNA replication proteins [BR:
mcep03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
125012737 (polE)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
125012737 (polE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
125012737
NCBI-ProteinID:
XP_047448811
LinkDB
All DBs
Position
8:14139328..14155557
Genome browser
AA seq
2293 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDQENQDDGSSMSALKRLERSQFTDEIDARFGFDRMKEPGEKT
GWLINMHPAEILDEDKRMISAVDYYFIQEDGNRFKVALPFKPYFYIATKKNCEREVISYL
SRKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDTYTSMLSSALSGGNVTSAEEDGMSKSISDQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAYLPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFIETRAALHGLNMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTNDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEGIPLEQVTNFNEV
CDEIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GAHCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SSAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENYVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPSSLTYNVRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQTADIEDFGMPAKPLQPAILISTKRKRASQGDDSQVESQDLELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGLIRDGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNMVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDLAGREADTFDLDHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLSNVYTAERTALLEKTTEDLLPPEKHNFEVRAEN
DMKAISRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVIDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRTSVEINSQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAHASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLMWMDP
ANFGGVKGKLPSSILYGEEGANQKQKTRGEGDEEGSEDEDEEDVEEDDGDGQTDEVEELI
ESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNTPGATPVKRRGGSQASQQ
AAGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTKSVTQASEMFPLLPGSHLP
LNNPALEFVKYVCQILSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFHDPCNSYILPEV
ICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCKAQYETDSIEMALVEALQKKLMSYTL
QDLMCTKCKGVKEANMPLYCTCAGDFDLTFSAKSFSEQITVFRNIASHYNMRYLEETIDW
LLAMSPSISQSSH
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggtacagagcggaccgaggacaaagtggaggagaccag
gaaaaccaggatgatggctcctcgatgtcggctctcaagcggctggagcgcagccagttc
accgacgagatcgacgctcgcttcggcttcgacaggatgaaggagccgggcgagaaaaca
ggctggttgatcaacatgcaccctgcagagatcctggatgaagacaagaggatgatcagt
gccgtggattattatttcatacaggaggatggaaacaggttcaaggtggctcttccattc
aagccatatttttacattgctactaaaaagaactgcgagagagaagtcatctcgtatttg
tcaaggaagtttcaagggaaagtggcaaagcttgaaattctcccaaaagaggatctggac
ctgccgaaccatctggtcggcctgaagagaagctacatcaagctgtcattcaacaccgtg
gacgacctggtcaaggtaaaacgtgagatttccccggctgtgcgcaagaacagagagcgg
gagcagtccaacgacacctacacctcgatgttatcaagcgccttatcaggtggaaacgtg
acctcagcagaagaagacgggatgtcaaagagcatttcagatcagttggacaacatcgtg
gacatgagagagtatgacgtgccttatcacgtacgagtgtccatcgacctcaagatccat
gtggctcactggtacaatgttcgataccgaggcagcgcttacctgccagagatcgtacga
agagacgatctcgtggagcgaccggaccctgttgttttggcgtttgacatcgagaccacc
aaactaccgctgaaattccccgacgcagagacggatcaaatcatgatgatctcctacatg
atcgatggacaaggcttcctgatcactaacagagagatcgtctctgagaacattgaggat
tttgagttcactcccaaacctgaatatgaggggcccttcacggtcttcaatgaggatgat
gaggctgcactcattcaaaggtggtttgatcacgttcaggaaacaaaaccaaacatcttt
gtgacctacaacggagacttctttgattggcctttcattgagacccgggctgccctccat
gggctgaacatgcacagagagattggtttccagaaggataatcagggggagtacaagtct
agtcaagccatccacatggactgcttaaggtgggtaaagagagacagctacctgccggtg
ggaagtcacaatctgaaggcagcagcgaaggctaaacttagctacgacccagtggagctg
gatccagaggagatgtgccgcatggcaacagaggagccacagacgttggcaacctactcc
gtgtccgatgctgtggccacatattacctgtacatgaaatatgttcaccccttcatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggact
ctgtgtgaagccttgcttatggtgcaggctttccacgccaacatcgtcttccccaacaag
caggagcaggttttcaacaaactgaccaatgacggccacgtcatggactccgagacctac
gtgggcggccacgtggaggcgctggagtccggagtgtttcgcagtgacatcccctgtcgt
tttaaaatgaacccagccgccttcgacttcctcttgcaaagagttgagagaacgatgcgt
cacgctgttgaggaagaggagggcatccctttggagcaagtcaccaactttaatgaggtt
tgtgatgaaatcaaaaagaagctgatctcactgaaggaggttccaaacaggatcgaatgc
cccctcatctaccatctggacgttggggccatgtaccccaacatcattctcaccaaccgc
ctgcagccgtcggctatggttgatgaggccacctgcgccgcctgtgactttaacaaaccc
ggcgcccactgccagaggaggatggcctggcaatggagaggggaaatcatgcctgccagt
cgcagcgagttccaccgcatccagcagcagctcgagtctgagaagttccctccgtttttc
cccaacggtccgcctcgagctttccacactctcaacagggaggagcaggccaagcatgag
aagaaacgtctggcagactattgtaagaaggcctacaagaagacgcacgtcaccaggctg
gaggagcgagttaccaccatctgtcagagagaaaactccttctacgtcgacaccgtcaga
gccttcagagatcggcgctacgaattcaaaggacttcacaaagtgtggaagaagaaactg
tcgtcagctcaggacagtggagacgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctctccagctggctcacaagtgcatccttaactcgttctacggctatgtc
atgaggaaaggggcgcgctggtactccatggagatggccggtatcgtgtgcttcaccgga
gccaacatcatcactcaggccagagagctcatcgaacaaatagggaggcctctcgagttg
gacactgacggtatctggtgtgtcctccccaacacgtttcctgagaactatgtggtaaag
accagtaatgagaagaagcccaaggtgaccatctcctacccgggggccatgctgaacatc
atggtgaaggagggattcaccaacgaccagtaccacgagctggtcgacccgtcgtctctc
acttacaacgtccgggcagagaacagcatcttctttgaggtggatgggccgtacctggcc
atgatcctgccggcctccaaagaggaagggaagaagctgaagaagaggtacgccgtgttt
aacgaggatggctctctggctgagctgaagggtttcgaagtgaaaaggagaggagagcta
cagctcatcaagatctttcagtcgtctgtgttcgaggctttcctcaaaggtaccaccctg
gaggaggtctacgcatctgtggccaaggtggccgactactggctggatgtgctgtacagc
aaggccgccaacatgccagacgcagagctgtttgaactgatttcagagaatcgttcaatg
tccagaaggctggaggactacggagagcagaagtccacgtccatcagcacagccaagaga
ctggctgagttcctgggagaccagatggtgaaggatgctggtctgagctgtcgctatgtc
atctcccggaaaccagagggttcccccgtcacagaaagggccattcctctggccatcttc
caggcagagcccagtgtcaagaaacatttccttcgtaagtggttgaagatgcccagcctc
catgacttggacattcgctctattcttgattggagctattacatagagaggttgggtagt
gcgatccagaagatcatcaccattcctgccgcgctgcaacaagtgaagaatccggttccc
agagtgcgtcatcccgactggctccacaaaaaactcctggagaaaaatgatatctacaag
caaaagaaaatcagcgaactgtttactagtgagggaaagagacaagtggcccaccagccc
cttgaagcaggacaaactgctgacattgaggactttgggatgccagccaaacccctgcag
ccggccattctcatcagcaccaagcggaagcgggcttcgcagggcgacgacagccaggtc
gagtcccaagatctcgagctcacgcagtcctggagagagatcctggggccgcccccgcct
atgggaaagacacgggaggagcgtctagtgtggctgcggtaccataagaagaagtgggag
ctgcagctgaggcagaggaaggagaggaagaagaggaggaggctgctggatggtgaagct
cagcctgtcggaggaggactgatcagagatggtccaaccacaggcctgggaagcttcctt
cgcagaacagcacgcagcatcctggacatgccgtggcaaattgtgcagattgcagaaaca
agtcaccctggtctgtataagctttgggccgtgattggaaacgacctccactgcatgaaa
ctcaacatcccacgtgtcttttatgtcaatcagaaagtcccaaagcaggaggagggagcc
acgtacaaaaaggttaaccgcatgcttcctcgctccaacatggtgtactacctttacgag
tactgtgtaccagaggacatgtaccaggaacacatcaatgagatcaacgccgacctctct
gcaccagacatcgaaggagtctatgagacgcaggtgcccttgctgtttcgagctctggtg
cagctgggatgtgtgtgcatggtgaataaacatgttgtgagggatctggcaggcagggag
gcagacacgttcgatctggaccatctggagatgaggtctctggcccagttcagctacctg
gaacctgggagcgttcgacacatgtacttgtatcatcacagccagggccacaaagctctg
ttcggtctgttcatcccctctcagcgcaaagccagcatttttgtcctggacacagttcga
agcaaccagatgcccaatctgagtaacgtctacacagccgagcgcaccgccctcctggag
aagaccacagaggatcttctgcctccagaaaagcacaactttgaggtccgggctgaaaac
gacatgaaagctatctcccgtgcactgcaacgcattctgctgaactacaaggaggagcga
cgcggacccaccctcatcgctgtgcagtcaaactgggagctgcggcgactggcggcaggg
atgccggtgctggaggagttccctgtcgttcccgtgcacgtgattgatgagatcagctac
aacgtgctcgactggcaacgccatggtgcacggcgcatgatccgccactacctcaacctg
gacagctgcttgtcacaggcttttgacatggccaggtattaccacttacccgtgggaaac
ttgcctcaggacgtgtccatctttggctcagatttgttcctggcgagacatctgcgtaag
cacaaccacctgttgtggctttcacccacagccaggcccgacctcggaggaaaagaggcc
gacgacagtcgcctggtcatggaaagcgatgacaggacctctgtggagatcaactctcag
ggatgttattccacagtttgtgtggagctggacctgcagagcctggccgtgaacaccatc
ctgcagtcgcagcacgtcaatgacatggagggcggagccagtctgggcgtcagtttcgac
gtgatccagcaggcctcgctggaggacatgatgtcaggaaaccagggggccagcgctcac
gccagctacgacgagactgctctgtgctccaacaccttcaggatcttaaagagcatggtg
gtcggatgggtcagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtgatg
cacttctaccgctggctgcgctctcccagctccctgctctacgaccctgcactgcaccgc
accctgcacaacatgatgaagaaggtgttcctgcagttggtcgcggaattcaaacgtctg
ggctccactgtggtgtatgggaacttcaacaggatcatcttatgcactaaaaagcggagg
atcgacgacgccattggctacgttgagtacatcaccaacagcatacactcaagagaaatc
ttccactctctgtcgatctccttctcgcgatgctgggagttcctgatgtggatggacccg
gccaactttggcggtgtgaagggcaaactgccctctagcatcttgtacggagaggaaggc
gccaaccagaagcaaaaaacacgaggggagggagacgaggaaggaagcgaggacgaagac
gaagaggatgtcgaggaagacgatggagacggacagacggatgaggtggaggagctgata
gaaagcaactggaatatcatgcagtatcttcctcaaacggcctcctgtcagaaatacttc
ctcatgattgtctcagcctacattgcagcagtttaccacagcatgaaggaggagctgaga
cgtaacactcccggggcgacgccagtcaagagacgcggcggcagccaggcttctcagcag
gcggccggggacttgagtgcacttcctggaatgatctccttctcccaggagtacgtgtcc
agcgagctcacgcagaactttttcaccatcactcagaaaatccagaaaaaggtgacgggc
accaagagcgtgacccaggcctctgagatgtttcccctcctgcctggttcccacctgccc
ctaaacaacccagccctggagtttgtcaaatatgtctgccagattctttcgctcgatgcc
aacattgtgaatcaggtgaacaagctgaagagagacctcctgcgtctcgtggatgttggg
gagttctcggaggaagcccagttccatgacccctgtaactcctacatcctgccagaagtt
atctgccaccactgcaacttctgtcgtgacctggacctctgcaaggacccgtcagtggca
caggatgggtccgtcttgcctcagtggttctgctccaactgcaaggcgcagtatgagact
gactctattgagatggctctggtagaagctttgcaaaagaagctgatgagctacacactg
caggacctgatgtgtaccaaatgtaaaggcgtgaaggaagctaacatgcccctctactgc
acatgtgctggagactttgacctcactttctcagccaagagcttctctgagcagatcaca
gtgtttcggaacattgcgtcccactacaacatgcgctacctggaggagaccatcgactgg
ttgcttgccatgagcccttcgatcagccagagctctcactaa
DBGET
integrated database retrieval system
