Mugil cephalus (flathead mullet): 125012970 Help Entry 125012970         CDS       T08342                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism mcep  Mugil cephalus (flathead mullet) Pathway mcep04382   Cornified envelope formation mcep04510   Focal adhesion mcep04512   ECM-receptor interaction mcep04518   Integrin signaling mcep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mcep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125012970 (col4a3)    04518 Integrin signaling     125012970 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125012970 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125012970 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     125012970 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcep04147]     125012970 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:mcep00536]     125012970 (col4a3) Exosome [BR:mcep04147]  Exosomal proteins   Exosomal proteins of other cancer cells    125012970 (col4a3) Glycosaminoglycan binding proteins [BR:mcep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125012970 (col4a3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  125012970 NCBI-ProteinID:  XP_047449166 LinkDB All DBs Position 9:complement(513308..541868) Genome browser AA seq 1665 aa AA seqDB search MEAPGGSRRRIVPLLLVLVLTLCCSAERVCYCSGTSSCHCDGVKGQKGESGYPGYPGLPG VTGYPGKEGHPGPSGEKGDLGAAGRPGLKGSRGHPGDPGLLGHPGLPGIPGNEGPMGRPG LHGCNGTKGDFGFRGFPGVPGPPGPRGRDGERGMKGESFVFSISQDIKGVTGPPGPNGEQ GPPGSPGFPGSPGPPGPSGYSGRPGLPGLPGEKGQEGQRPVASGPAGEKGDRGPRGIPGQ KGIKLYVEGPKDLKGEPGDPGEKGCRGPPGIPGNPAIKGEKGDRGGPGAVGRPGKYGLPG VLGVPGDPGDVGYFGPAGIDGAPGEKGDRGLPGLRGETVWNHRYLKGQHGVPGIPGDPGD PGQEGLIGFPGLSGDPGVASPGPPGHQGPPGSFGPKGDRGDPGQNIIGSPGLSGPPGSPG AEGEPGEPGIPDLLEGGVGRPGAKGVKGLMGVTGNRGMGGQTGDKGQVCMVCPVIYGKPG PPGNPGIPGEKGRAGSDGAPGPEGQKGVEGIRGAPGPQGTYGLPGPQGPPGPPGDQGIMT KVGQKGEEGSIGRRGRQGLDGPDGPPGFPGPKGLLGQKGNPGPPGQKGDRGPQGRTGARG LVGQVGPTGPAGRGQPGPPGPKGNVGTWGPPGEPGRPGEKGSPGGTVTYPGDPGQKGEKG ASGYPGRAGVPGLRGQTGYYGPKGEKGDKGYSLRGHPGFPGVKGEKGVPGAPGLQSFGIK GRAGPSGPPGMPGPKGDKGFGFPGLQGQMGPQGEDGSVGPPGHPGPTGIQGVPGLPGLDG EPGPKGHAGLDGVQGPEGLVGLCVPGSRGPKGEQGPRGVIGFRGVQGIKGMKGVAGAQGV GAQGPQGPYGSPGFPGDPGPEGVMGEKGKTGKNGEPGIPGNRGDMGPPGPTGSPGFDGRP GESGQPGPRGHVGVDGVSGSQGPAGPPGDRGETGPKGFQTDVAVPGDPGSPGDPGFPGRP GPEGEPGPPGPQGPDGINGGPGTVGPEGLPGDPGRDGEKGLPGPTGLPGNQGDMGMPGCK GEKGHKGQCGPPGEDGTKGNDGPKGCKGEPSPPGPGPKGCPGQKGNPGCPGSPGAKGPPG NRGDFGPPGPYGPCGPRGPSGPPGCRGPPGPPGVKGCDGPPGTKGPTGNPGFPGNKGAPG DPGLPGGRGNQGQDGIPGPPGEKGAMGCPGTGPQGPDGEKGPPGCPGEKGPPGSCGPPGP LGPEGDRGFPGFPGPPGPPGYTGMKGFCIPGDKGEKGFPGPPGPKGPPGCKGPPGPPGPG NKGEKGCKGGPGQPGPPGMPGDPGPAGEPGKDQQPGPPGHKGLRGRTGESGRVGMAGEVG PPGGPGPPGPKGPMGIKGKRGNDATQGVVVEMGEQGREGNPGLKGERGPHGWPGRPGAEG RKGVTGAPGRKGARGGLGLKGEDGNRGEPGPKGAAGLRGAKGFKGRPGPEGESSPMPWRN GFLFTKHSQELSVPQCPPGSSSLYDGYSLLFINGNNRAHGQDLGTLGSCLPRFSTMPFMF CNTHETCRYASRNDYSYWLSVNETVSNLQEPISDSFVESHISRCSVCEARANVMAVHSQT NVAPDCPSGWDSLWKGYSFVMETGVGAEGSGQPLASPGSCLEKFRKVPFIECHGKGTCDF YSDSFSYWLAALNPNDMFRKPEPKTDTGPLPDYLISRCRVCMKQL NT seq 4998 nt NT seq  +upstreamnt  +downstreamnt atggaggctccgggcggctcgaggaggaggatcgtcccgctgcttctagttctggttctg acgctgtgctgctccgctgagagggtgtgttactgcagtgggacgtcctcctgtcactgc gatggggtcaaaggtcaaaagggggagtctggttaccctggatacccaggacttcctgga gtcacgggttaccctggaaaagaaggtcaccccggcccatctggagaaaagggtgatctt ggagcagcaggacgtcctggactgaaaggatctaggggtcatccaggagatccaggactt ctaggacatccaggacttcctggaatccctggaaatgaaggaccaatgggccggcctgga cttcacggatgcaatgggacaaagggggatttcgggttccgaggtttccccggggtccct ggacctcccggccctcgaggccgtgatggagagcgagggatgaagggagagtcgttcgtg ttctccatcagtcaggacatcaaaggagtcacaggaccaccaggacccaacggagaacag gggccaccaggttctccaggttttccaggttctccaggacctccaggacccagcggatat tccgggcgcccggggttgccggggttaccgggagagaagggtcaagaaggtcagcgtccg gtggcgtctggtcctgctggtgagaagggcgatcgaggacctcggggaattcctggacag aaaggaatcaaactgtacgttgaaggacccaaggacctgaagggagaaccaggagaccct ggagagaaaggttgtcgtggacctcctggcatcccggggaacccggcgattaaaggagag aagggcgatcgaggaggtcctggagcagtgggtcgaccagggaagtacggactccctgga gttcttggagtaccgggggaccccggggacgttgggtacttcggtcctgctggcattgat ggcgccccgggagagaaaggggaccgcggtcttccaggtcttcgaggagagacagtctgg aaccatcgatacctgaagggccagcatggggtccctgggatccctggggacccaggagac cccggacaggaaggactcatcggttttcctgggctcagcggtgatccaggtgtggcttct cctggtccaccaggccatcagggacccccaggctcattcggacctaaaggagatagagga gatccgggccaaaatattattggttcaccaggattaagtggacctccgggcagtccgggg gctgaaggagaaccgggagaaccaggaataccagatctcctggaaggaggcgttggtcgt ccaggagctaaaggtgttaaaggcctaatgggagttactggaaacagagggatgggggga cagacaggtgacaaggggcaggtgtgcatggtctgtcctgttatttatgggaaacctggt cccccaggtaatccaggaattccaggtgaaaaggggcgggcaggttcagatggtgctcca ggaccagaaggtcagaaaggggtggaaggtatcagaggagcacctggtccacagggcacc tatggtttgcccggcccccaggggcccccagggcctcctggtgatcagggaatcatgaca aaggttggccagaaaggagaggagggatccattggccggcggggacgtcaaggcctcgat gggccagatggacctccaggatttccaggaccaaaaggtttactaggacagaaaggaaac ccagggcctccagggcaaaaaggtgacaggggcccccaggggaggactggtgccagagga ctggtaggacaagtggggcctacaggacctgctggtcgcgggcagccagggcctccagga cctaaaggcaatgtaggaacctggggacctccaggagaacctggaaggccaggtgaaaaa ggttctccaggtggaactgtaacttatccaggagatccaggccagaaaggagagaaaggt gcatcaggatatccaggacgtgcaggtgtcccgggactccgtggtcaaacaggatattat ggcccaaaaggagaaaaaggagataaaggatattccctcagggggcacccgggcttccca ggggtcaaaggagagaagggcgttccaggagctccaggtctacaaagttttggcatcaag ggacgagcggggccatcagggcccccagggatgccggggccaaagggagacaagggtttc ggtttcccgggcctgcaaggtcagatgggccctcagggagaagatggctctgtgggaccc ccaggacacccaggacctacagggatacagggagttccaggactgccaggactagatggt gaaccaggacccaaaggtcatgctggtctggatggagttcagggcccggagggtttggtt ggactttgtgtacctggatctcgagggcctaaaggagagcagggaccaaggggggtcatt ggattcagaggagtccagggcataaaggggatgaaaggagttgctggggcgcagggtgtg ggggcccagggacctcagggaccgtatgggtctccagggtttccaggagatccaggtcca gaaggagttatgggagagaaaggcaaaacaggaaagaatggggaaccaggaatcccaggg aaccgaggggacatgggtcctccaggaccaactgggagtccagggtttgatgggagacca ggggaatccggacaaccaggaccaagaggtcatgttggtgtagatggggtcagtggttcg caggggcctgcggggccaccaggggacagaggagaaactggaccaaaaggattccagaca gatgttgcagttcctggagatcctggaagccccggagatcctgggtttccaggtcgtcct ggccctgaaggagagccaggtcccccaggaccacagggaccggatggcatcaacggtgga cccggaactgttggccccgaaggacttcctggagacccaggaagagatggagagaaaggt cttcctggacccactggactcccaggcaaccagggagatatggggatgccaggttgtaaa ggcgagaaaggtcacaaaggccaatgtggcccacctggtgaagatggaacaaaaggaaac gacggaccgaaaggttgcaaaggagaaccaagtccacctggaccaggacctaaaggatgt cctggacagaaggggaatccaggatgtccaggatcacccggtgcgaagggaccccctgga aaccgtggagattttggtcctccaggaccctatgggccctgtggccccagaggaccctct ggaccccctggatgtagaggtccccctggacctcctggagtaaaaggttgtgatggtcca ccaggaactaaaggccccacaggaaaccccggtttcccaggcaacaagggggctcctgga gaccctggtctacctggtggcagaggaaaccagggacaggatgggatacctggacctcct ggagagaaaggagccatgggatgtcctggaactggacctcaaggcccagacggagagaaa ggtccacccggatgtcctggagaaaagggtcctcctggttcctgtggaccccctgggcct ttgggtcctgaaggagatcgagggtttcccggttttcctggacctcctggtcctcctggt tatactggcatgaagggattctgcatcccaggagataaaggagaaaaaggatttccggga cctcctggacccaaaggtccacctggctgtaagggtcctcctggtcctccaggtcctggt aataaaggggagaagggatgtaaagggggaccaggtcaaccaggaccacctgggatgcct ggtgacccgggcccagctggcgagccgggtaaagaccaacagccaggaccaccggggcac aaaggactgaggggacgtactggtgaaagtggccgtgttggtatggcgggagaggtcgga ccaccaggtggccctggacccccaggaccaaaggggccgatggggattaaaggaaagagg ggcaatgatgcaacgcaaggagtggtggtggagatgggagaacaaggtagggaaggaaac ccggggctcaaaggagaacgaggaccccatgggtggcctgggagacctggagccgaaggt agaaaaggcgtcaccggggcccccgggcggaaaggagcacgtgggggtttaggactgaaa ggagaggatggaaaccgaggagaacccggacctaaaggtgctgctggtctacgtggtgcc aagggatttaaaggtagaccaggtccagaaggtgagagttcccccatgccctggaggaac ggcttcttgttcaccaaacacagccaggaactctccgtgccccagtgccccccaggatcc tcctccttgtacgacggatactcgctgctgttcatcaacggaaacaaccgagctcacggg caggacctgggtacattaggtagttgtctacctcgcttcagcaccatgcccttcatgttc tgcaacactcatgaaacctgtcgctacgcctcccgcaacgactactcctattggctgtcc gtcaacgaaacggtgtcaaacctccaagagccaatcagcgacagttttgtggagagtcac atcagccgatgttcagtctgtgaagccagagccaacgtcatggccgtccacagtcagacc aacgtcgctccagactgtccgtcgggttgggactctctctggaagggatactccttcgtc atggaaacgggagtgggggcggaggggtcggggcagccgctggcttcacctggatcctgt ctggaaaagttcaggaaggtcccattcatcgagtgtcatggaaaaggaacctgtgacttc tacagcgactccttcagctactggctggcggctctcaaccccaacgacatgtttaggaaa ccagaacctaaaactgacacaggaccccttccagactatctgatcagtcgctgtcgagtc tgcatgaagcagctgtga

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