Mugil cephalus (flathead mullet): 125013168
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Entry
125013168 CDS
T08342
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125013168
03041 Spliceosome [BR:
mcep03041
]
125013168
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125013168
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
125013168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125013168
NCBI-ProteinID:
XP_047449510
LinkDB
All DBs
Position
9:complement(6240167..6259035)
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AA seq
749 aa
AA seq
DB search
MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFTDTFQHLYRCPEDDKSKIVRVLNLWQKN
GVFDMDIIQPLMDMSNGIIVPPPTLEAPADPVPATQPLVSNASAVPAVPQLPTPDALAAV
AQLFQSPHGQELQRMLQNFQQADKTLAAATANNLSNPAQMPVAQHNHYGTHDEKKISLAE
KLLDRFDYDDDPEDITATEGNLQSQGLPEKMFHPFPGQMPMPDVHPSMLGQPGGIKSGGM
NHGEHHMIPEGYHSINDPYAQQSQGGSKDDPSSWREGRHRGYGRRSRSSSRSPRRRRSRS
SSRSRRSRHRRSRSRERRWRSRSRSQDRCEREKDRERRQKGLPSIKSQTLSVCSTTLWVG
QLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKLSRGSYKVNQK
PVKIAWALNKGIKSAHKKFWDVERGVTYIPWSKVKPEELESYREGGMLDAETLNPEWNNA
KDFNNQATVNGAFDSVPDGTATAHIQVPPVQQAEPLGSPPSFPGPIMLSPTSMPPGGAPF
IPAEFVTGSVKPIDESAEDSKGDKGPSSDAGTSNHLGSPGPPVMTLPGPAIMQGPRPGMP
LQPPPGLPNHHVPPFLPPPNMPHMPPPMMPRGPMFPTDRFRMPMSFPPRGPPFHRHPSMG
PEAMDDREARHFRNGRPEFACPPFHRGRW
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaacgcgttcaacatggagttattctccatgattgacatgaagcctcca
atatcccgtgctaaaatgatgtctgtaacaaaatcagccatcaaagctatcaagctttac
aaacatgttgtccagattgttgaaaagttcatcaagaagtgtaagccagaattgaaagtg
cccggtttatatgtggttgattccattgttcggcagtcacgccatcagtttggtgttgac
aaggatgtatttggacccagattcttgaagaatttcacagataccttccaacacctttac
cgctgtccagaggatgataagagtaaaattgtccgtgtcctaaacctgtggcagaaaaat
ggtgtatttgacatggatatcattcagcctttgatggatatgtccaatgggatcattgta
cctccccctacactggaagctcctgcagaccctgttccagcgacacaacctcttgtcagt
aatgcctcagctgtgcccgctgttccccagctacccactcctgatgccctagctgctgtg
gcacaactttttcagtccccccatggtcaagagctgcagcggatgcttcagaacttccag
caggcagataagaccctggcagctgccactgcaaacaacttatcgaacccagcccaaatg
ccagtggcccagcacaaccattatggcacccacgatgaaaagaaaatctctttagctgag
aaactccttgacagatttgactatgatgatgatcctgaggatataacggctacagaagga
aaccttcagtcacaaggtcttcctgagaagatgtttcacccgtttcctggtcagatgccc
atgcctgatgttcatcctagtatgctgggacagcccgggggtatcaagagtggaggaatg
aatcacggtgaacatcatatgataccagaaggatatcattccataaatgatccctacgct
caacaatctcagggaggttcaaaagacgacccgtcatcctggcgtgagggcagacacaga
ggctacggcaggagatccagatctagttccagatctcccaggagaagaagatcaagatct
tcatctcgctcaagaaggtcaaggcatcgacgctctcgttccagagaacgccgctggaga
tctcggtctcgctcccaggataggtgtgagagagaaaaggaccgagagcgccgacagaaa
ggtcttcccagcataaagagccagacactcagtgtttgcagcactacactttgggtggga
caactagacaagaagacccagcagtctgatgtgatgtcccttttagaagagtttggccag
attgagtctataaatatgattcctccgagaggttgtgcgtatattgtaatggttcacaga
caagatgcctacacagccttgaacaaactaagccgggggtcttacaaagtcaaccagaaa
ccagttaagattgcttgggctctgaacaaaggtataaaatcggcgcacaaaaagttctgg
gatgtggagcggggagttacctacattccctggagcaaggtcaaacccgaggagttggag
agctatcgggaagggggcatgctggatgcagagacactaaatccagaatggaataacgct
aaggacttcaacaaccaggcaactgtaaatggagcgtttgacagtgtaccagatgggact
gccactgctcacattcaggtgcctccagttcaacaggcggaaccccttggaagtccacct
tcatttcctggccccatcatgttgtcccccacgtcaatgcctccaggaggagctcctttc
atccccgcagagtttgtaaccggaagtgtgaaaccaatagatgagtctgcagaggattct
aaaggagacaaaggcccttcctcagatgctgggaccagcaaccacctcgggtcccccggg
ccgccggtgatgaccctgccgggccctgcgatcatgcagggacccagaccgggaatgcct
ctgcagcctcctcctggcttaccgaatcaccacgttcctcctttccttccacctccaaac
atgccacacatgcctccgccgatgatgcctcgagggccgatgttccccacggacagattc
aggatgcccatgtccttccctccccgtggtcctcctttccatcggcatccttcgatggga
cccgaggctatggatgacagagaagcgaggcatttccgaaacggaaggccagagtttgcg
tgcccaccctttcacagggggaggtggtag
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