Mugil cephalus (flathead mullet): 125013440
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Entry
125013440 CDS
T08342
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125013440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcep04040
]
125013440
Ion channels [BR:
mcep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125013440
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
AFOR_C
RE_AspBHI_N
Motif
Other DBs
NCBI-GeneID:
125013440
NCBI-ProteinID:
XP_047450081
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Position
9:complement(2340230..2346591)
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AA seq
760 aa
AA seq
DB search
MGTKQAADAAEPNDDQERKEKCLEWLLKKDDSETTPLPMDSNVSIARQYATSVDSRRTSV
FTKDTVLTAASLGDTTQLSGLLDYLRINDKTLTSPEFTDETTGKTALLKALLNLKDGKND
TIDVLLDIAEQTGDLEDLINASYRDLFYKGQTALHVAIERRSFDHVKLLVQKGADVQAKA
NGKFFQRHAGLGFYFGELPLSLAACTNQPDIVSFLMDNPHRRADVTDKDSQGNTVLHVLV
VVADNTAENTDMITRMYDDILILHNRLEKSKKIQLETIENNQGLTPLKLAAKLGKIGLFK
HMLNRELMDEDTRPLSRKFTEWVYGPVHSSLYDLSSIDTNENNCVLEIIIFGSEIPNRPE
MLQIEPLRSLLEDKWQRFASKIFLINFLAYLVYLAIFTTVAFYRKDGQPPFPVEDVPLDY
LRCVGEIVSVLGSLWFFYKAILVFRKNPPNFTAVTTDGFSEILFFLQAALLLICTVLYFC
GRREYVGLLVISLALAWINVLYYTRGFKQMGIYNIIMQRMMLGDLLQFLAVYSVFLFGFS
AAIVALMDDSPTNPIKVKNGSLARERSFNFDTFKCEKPSYNDFSFTTLEMFKFTIGMGDL
EFTDLVQYKEVFYVLLIFYIVLTYIMLLNLLIAVMGNTVERLSSQSETIWNLQRAFTILD
IERTLPKWLKTKLDSGGSKMVSLKNEQDEGQRFFRVEEMNWRQWRSDLGVREEDPGNYMM
KPEEEKETRENTWNLDQVLDRIRSRRSFSQQPSISRRSRV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaaacaggcagcggacgcagcggagccgaacgacgaccaggagaggaaggag
aaatgtctggaatggctcctcaaaaaagacgactcggagacaacacctctgcccatggac
agcaacgtctcgatcgctagacaatatgcaacaagtgttgacagccgccgcaccagtgta
ttcaccaaggacacggtcttaacagcagcgtccctcggagacacgacgcagctcagtggt
ctgctcgactacctgcgaatcaatgacaagacactcacaagcccagaattcacagatgaa
acaactgggaaaacagcgctactcaaagctttgctgaacctgaaagatggcaaaaacgac
accatcgatgtcctgctggacatagcagagcagacgggagacctagaggatttgatcaac
gcgtcttatcgagatctgttctacaaaggtcaaaccgctttacacgtcgccatcgagaga
aggagcttcgatcacgtgaagcttctggtccagaaaggagcagatgtacaagccaaagca
aatgggaagtttttccagcgtcacgcaggactgggcttttattttggggagctgcctttg
tctctggccgcctgcaccaaccagcccgacatcgtgtccttcctcatggacaaccctcac
agacgagccgacgtgacggacaaagactcgcagggaaacaccgtgttgcacgtgttggtg
gtcgtggcggacaacacggcggaaaacacggacatgatcacacgtatgtacgacgacatc
ctcattctacacaacaggctggagaagagcaaaaagatccagctggaaacgattgaaaat
aatcaaggactgactcctctgaaattagcagccaagctcggcaagatcggattgttcaaa
cacatgttgaaccgggagttaatggacgaggacacgaggccgctgtccaggaagtttaca
gaatgggtgtacgggcccgttcactcctcactttacgacctgagctccatcgataccaac
gaaaacaactgcgtgttggaaataatcatatttgggagtgaaattccgaaccgacctgag
atgctccagatcgaacccctgcgcagtctcctggaggataagtggcagaggtttgcgtcc
aagatcttcctgataaatttcctggcttacctggtttacctggccatcttcaccaccgtg
gccttctacaggaaggacgggcagcctccatttcccgttgaagacgtcccactcgactac
cttcgctgcgttggtgagatcgtcagcgtcctcggatctttgtggtttttctataaagcg
atactcgttttccgtaagaaccctccaaactttacggccgtgaccacggatggattcagc
gagattctgtttttcctacaagcagcgctgcttctgatctgcacggttctgtacttctgt
ggacggagggaatacgtcggcctcctcgtgatctcgctggctctcgcctggataaacgtc
ctttactacaccagaggtttcaagcaaatgggaatatacaacatcataatgcagagaatg
atgctcggggacctgctgcagtttttagccgtctacagcgtctttctttttggattttct
gctgctatcgtggccctcatggatgattcccctacaaatcccatcaaagtgaagaacggc
tcactggcccgagaacggagcttcaactttgatacgttcaagtgtgagaagccgagttac
aacgacttcagtttcacgactctggaaatgttcaagttcacgatcggcatgggagacctg
gagttcaccgacctcgttcagtacaaggaggttttctacgtcctcctcatcttctacatc
gttctcacctacatcatgctgctcaacctgctcatcgcggtgatgggaaacacggtggaa
agactctcctcacagagcgaaaccatctggaacctgcagagggcctttacaatcctggac
atcgagaggactctgcccaagtggctgaagacgaagctggactccggcgggtcgaagatg
gtgtctttaaaaaacgagcaggatgagggtcaaagatttttcagagtggaggaaatgaac
tggagacagtggagatcagacctcggagtccgtgaagaagatcctggaaattacatgatg
aagccggaggaagaaaaagagactcgagagaacacgtggaacctggaccaggtcctggac
cggatccgctccagacgaagcttttcgcagcagcccagcatcagccggaggagtcgggtt
taa
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