Mugil cephalus (flathead mullet): 125013444
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Entry
125013444 CDS
T08342
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04137
Mitophagy - animal
mcep04140
Autophagy - animal
mcep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125013444 (hif1al)
04137 Mitophagy - animal
125013444 (hif1al)
04148 Efferocytosis
125013444 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125013444 (hif1al)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125013444 (hif1al)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
125013444
NCBI-ProteinID:
XP_047450086
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All DBs
Position
9:2800608..2818458
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AA seq
672 aa
AA seq
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MEKKEGTATAKRTSSEQRKLRSRDAARCRRSQETEVFYELAHTLPLPRRVATHMDKAAIM
RVTLSFLRMNRLLRPDGEQKEEEDEDPMDSFYPQALAGFIMVMTEEGDMIYLTENVNKHI
GITQLELLGQSIYDFVHPCDQEELRDLLTPRPGVNKKSQTEQLTERNFFLRMKSTLTSRG
RTVNIKSATWKVLHCTGHIRPFGGVSTSPPADRVMTLLCEPVPHPSSVEFPLDTCTFLTR
HSMDLRFTHCEGRVTELVGYKPDDLIGRSAYGFHHALDSDHINKSLHTLLSKGQVSTSHY
RFLANSGGFVWAETQATVLYSSKTSQPEAVVCLNFILSAVEQPDVVFSVEQTRCGRLNKD
EPRSPVPAAEDCGTSESDSAAEDDADSTPGDAADLFLKLSEKPEELLQLAPDAGDADVPL
TGGFVELSFASPSNPSSPDSLPEHPQDLCTPVLRQLLSPIFNPITPPPSSPSSSSPPPAS
SPEPLPSPDEEVMDTSEVEKFFALWPEDAEKKGEAPEDIEGMDLDMLAPYISMDDDFQLT
FLSSLPEAADNPPACSSEPAAVAPPATASRKRTHNPDEEMPSQLMIQDKRQKQDPSSIEE
ELLLTHRLSRCLEETDQSDLVLKPSSGGRSQLLTDRDPVLGGIQGLCDTAALMRDIFMNR
PPDLSPPLSPMT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagaggggacggctacggccaaacggaccagttcggagcagaggaagctt
cgttcccgtgatgcggccaggtgtaggcggagtcaggagacggaggtgttttacgagctc
gcccacaccctgccactcccacggcgagtcgccacccacatggacaaagccgccatcatg
agagtgaccctcagcttcctgaggatgaaccgcctcctgcgacccgatggagaacagaaa
gaggaggaggacgaagatccgatggactctttctatcctcaggcgctggccggcttcatc
atggtgatgacggaggagggagacatgatctacctgacggaaaacgtcaacaaacacatc
ggcatcacacagctggagctgctgggtcagagtatttatgactttgtgcatccatgcgat
caggaggagctgagagacctgctgactccacgcccaggtgtgaataaaaaatcgcagaca
gagcagttgactgagaggaatttcttcctgcgaatgaagagcaccctgaccagcaggggg
cgcaccgtcaacatcaagtctgctacctggaaggtcctccactgcacaggtcacatccgt
cctttcggtggcgtctccacgtcgcctcctgccgaccgagtgatgacgctcctgtgtgag
cccgttcctcacccgtccagcgtcgagttccccctggacacctgcaccttcctcacccgc
cacagcatggacctgcgcttcacccactgcgagggcagggttaccgagttggtcggatac
aaacctgacgatctgattggacgctcggcctacgggtttcatcacgcgctcgactctgat
cacatcaacaagagtctgcacacgttgttgtccaaaggtcaggtgagcaccagccactac
cgcttcctggcgaacagcggcggcttcgtgtgggccgagacccaagcgaccgtcctctac
agcagcaagacgtcgcagccggaggccgtcgtctgcctcaacttcatcctcagcgccgtg
gagcagccggacgtcgtcttctccgtggagcagacgcgctgcggccgcctgaataaagac
gaaccccgctcgccggtgcctgcagcagaggattgtgggacttcagagtctgacagcgcg
gctgaagatgatgcagattcgactcccggcgacgctgccgatctcttcctgaagctgagc
gagaagccggaggagctgctccagttggctcctgatgccggagacgccgacgttcctctg
acgggaggttttgtcgagctgtcgttcgccagcccctcgaatccgtccagtccggactct
ctgccggaacatcctcaggatctgtgcactccggtgctgagacagctcctctcacccatc
ttcaaccccatcactcctcctccatcgtcaccgtcatcatcatcaccaccaccggcctcc
tcacctgagccactgccgagccctgatgaggaggtgatggacaccagtgaggtggaaaag
ttctttgctctttggcctgaagatgcagaaaagaaaggagaagctccagaggacatagag
gggatggacttggacatgttggctccttacatctccatggacgatgacttccagctgacc
ttcctcagcagtttgccagaagcagccgacaaccctccggcctgttcgtctgaacccgcg
gctgtggcgcctccagcgacagcgagcaggaaacgcacccacaacccagatgaagagatg
ccatctcagctgatgattcaggacaaaagacagaaacaagatccttcctcaatagaagag
gaacttcttctcacccacagattgtcgcgttgtctggaggaaaccgaccaatcagatctg
gtcttgaagccgagctcggggggacggagtcagctgctcacggaccgagaccctgttttg
ggcggcatccagggactgtgtgatactgcagctctgatgagggacatattcatgaaccgc
ccccctgacctctccccgcccctctcaccgatgacctga
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