Mugil cephalus (flathead mullet): 125014004
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Entry
125014004 CDS
T08342
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125014004 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
125014004 (lrfn1)
Cell adhesion molecules [BR:
mcep04515
]
Immunoglobulin superfamily
SALM family
125014004 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125014004 (lrfn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
Ig_2
ig
fn3
LRR_9
Ig_DSCAM-DSCAML_C
Protocadherin
C2-set_3
DUF4834
Sp38
Motif
Other DBs
NCBI-GeneID:
125014004
NCBI-ProteinID:
XP_047450958
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Position
9:9101839..9301749
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AA seq
758 aa
AA seq
DB search
MDRLVLCVLLCAALVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPSIDRKTVELRLTD
NFITIIRKKDFFNMTSLVHLTLSRNTISQITPHAFVGLRSLRALHMDGNRLSVIKSDHFK
GLINLRHLILGNNQIHQVAPNSFDEFVSTIEDLDLSNNNLRSLPWEAIAGMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHLATKPYV
MEGQGVTLKCKAVGDPDPDIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSTKSGNDTKGYDKQDRRVMV
SELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKSFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPEDSKTKVSSSMHSQTNGSQQRLQRSTSKQPSDEGQREPQTPKECM
ALVLLVDNEKKDDAASATAILEVELPQLTADKMKRRTSLDAQRSGPPSEDTQTDSSLTGS
TMSLCLIGPNAGTKEAPRLKDKKSALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctgtgcgtgctgctgtgtgcagccctggtgaagggatacagctgt
cccggccgctgcatttgccaacacctctcgcccactttgactctgctctgtgctaagacc
ggtctgttgtttgtgcccccctccatcgaccgcaagaccgtcgaactgcggctcactgac
aacttcatcaccatcatccgcaagaaagactttttcaacatgaccagtttggtccatctc
accttgtcccgcaacaccatcagccagatcacgccccacgcctttgtcggcctgcgatcc
ctgcgggcgctccacatggacggaaaccgcctcagtgttataaaaagcgaccactttaaa
ggcctcatcaacctgcgtcacctcatcctgggcaataaccagatccaccaggtggcccct
aactcatttgatgagtttgtttccaccatagaggacttggatctttccaataacaacctg
cgcagccttccctgggaagctatagccggaatgaccaacattaacacgctcacactggac
cacaacctgattgaccacattggagcggggactttcacactgctcactaagctagtccgc
ctggacatgacctctaacaggctgcagaagcttccgccagacagcctgttccagcacgct
caggtgctgtctgatgccaagggctccagttcgtccactctggccgtgagctttggcggg
aaccctcttcactgtaactgtgagctgctgtggctccgcaggctgacgagggaggatgat
ttggagacctgtgcctcaccagagcacctcatggacaaatacttctggtccatccaagag
gaggagttcatctgtgagcctccgctgatcactaaacaccttgccactaagccctatgtc
atggaaggtcaaggtgtgactcttaaatgcaaagctgtgggtgatccagacccagatatt
cactggcggtcgccagatggcaagttggtgcataacaattcccgcacgatcctgtatgat
aatggcacccttgatattctcatcaccacgctgaaggacagcggggcatttaattgtgtg
gcgtccaatgccgcaggcatcgccacagctgctgttgagatcaacatgatccccttaccc
ttgtttgttaacaacacaggccacatgcgtgaggaccccggcctctctgacatcaccact
tccacaaaatctggcaatgacaccaagggctacgacaagcaggacaggagggtgatggtc
agtgagctgacctcctcctctgcagtgattcgctggccgtctgagcgccatatccctggc
atcagaatgtaccagattcagtacaacagcacagcagatgatactttggtgtacagaatg
atcccatctaccagcaagagcttcctaatcaatgacctggctgcaggacgggagtacgac
ctgtgtgtgctggcggtttacgacgacggcatcacatcattaacggccacacgtgtggtc
ggttgtgtgcagtttcacacggccagcgaggtcagtcaatgccgcttcatgcacagtcag
ttcctgggaggcaccatgatcatcattatcggcggcataattgttgcttcagtgcttgtg
ttcatcatcatcctgatgatccgctacaaggcctacagcagcccagaggacagcaagacc
aaggtcagctccagcatgcactcccagaccaacggcagccagcagcgtctccagcgttcc
acctccaagcagccctctgacgagggccagcgtgagcctcagacgcccaaagagtgcatg
gcactggtgctgctggtggacaacgagaagaaggatgatgcggcatccgccactgccatc
ctggaggtggagctgcctcaactgactgcggacaagatgaagagaagaaccagcctggac
gcacagcgctctggtcctccatctgaagacacgcagacggacagtagcctgacaggctcc
accatgtccctgtgtctcataggccccaatgccggcaccaaggaggctcccaggctcaag
gacaagaaaagtgccctggccaacatgggcttgctccctaatgagctcgcacgaactagg
cacagattttcctttgatggtggggattactccatatttcagagtcatagttacccacgc
agagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcgccgctc
gccaacaggagagttacattcagcagcactgagtggatgcttgagagcacagtctga
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