Mugil cephalus (flathead mullet): 125014125
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Entry
125014125 CDS
T08342
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125014125 (npas1)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125014125 (npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
125014125
NCBI-ProteinID:
XP_047451136
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Position
9:12355806..12391396
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AA seq
815 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSTHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTGPESASSSASTSSLAGTPEPAPSSPHSPADEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSTRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIYVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DILQLPESIRAERLRVSSSPADSSPQARGSQPGKNSAGKGDPDSKGREKFAATAVQSEER
RKRLLRSDPEGAPPETRRRLEELRHAEESVSASSDLASESEADEEEEAEWDQGGDSDRLK
QEDSGGGGKQSRGGDTPTRGERGGRVHNGRAVIQQLKSVVAPSSLSGSPSIKTEHEALNT
GGRWGSHTQTSVSHAHASQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPA
LSPAMSVSSPLPREERAVSRSGGGGGGGGGGGAISGNGPDFELLQRLAAGGAAGRVLFHP
LALGPQGPQSLYAPSTIRYAPPELPPSHHHSTGHSDGLQLRSDHHKGPPPAFFPHLQRLA
GLPPFSGFSPSDNPFSSGLPFCMNGLRGAAGTEED
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatgccgtttgtcagcgaggggaaatgcgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccactctgccctgtctccagaacctgcgtaaagagaaa
tctcgcaatgcggcccgttcacggcggggcaaggagaattttgagttcttcgagctggcc
aagatgctgccgctgcccggggccatcaccagccagctggacaaggcttcggtcatccgg
ctcaccatcagctacctgcacatgcgcacctttgccagccagggggacccgccctggagc
cctctgctggaaggagacagcaactgcagcaaagttagacgatcaactcattcactggcc
acggacatgtttgagcagcacctcggggcacacctcttacagtctctagatggctttgtg
ttcgtggtcagtcaggagggacgcttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagcgtgttcgactacatccacccggcggac
cacgttgagatggccgagcggctggggatcaggccccacctgagggccgaggccggctgc
cacacgggccccgagagcgcctccagctccgcgtccacctcctcccttgctggtacccct
gaacccgcaccttccagtcctcactctccggccgatgagcctcccgaccgtggcttcttc
atccgcatgaagtccacgctcaccaagagaggtctgcatgtcaagtcctctggatacaag
gtgatccacgtgacgggacggatccgctgccgccctgctctcgtcccgggctccacgcgc
tccacgcgccggccgatgggtttggtcgctctggcgcacactctcccgccctccacgctg
aacgaagtccgcatggagagccagatgtttgtcttccgcgtcaacatggacctgcaggtc
acgtattgtgagaacaggatttcagagtacatggatctgaccccagccgaggtggtggga
cacacctgttaccatttcatctatgtggaagaccttgaaaacctccgacagagccacgag
gacttgctgaggaaaggccaggtagtgacgggttactatcgctggcttcagaggagagga
ggctacctgtggatccagtccactgccaccgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggttaactatgtcctgagtcgaacagagttgcccgacactcccctg
gatatactgcagcttccggagagcataagagccgagcgacttcgagttagctcgtccccc
gccgacagctccccgcaggcccgaggatcacagccggggaagaactcagcggggaagggt
gaccctgattctaaaggcagggagaagtttgcggccaccgccgtccaatcggaggagagg
aggaagcgcctgctgaggtccgaccccgagggcgcacccccagaaacccggcgcaggctg
gaggagctccgtcatgcagaagagagcgtatcggcctcgtcggacctggcgagcgagagc
gaggcggacgaggaggaggaggccgagtgggaccaagggggagacagcgacagattgaaa
caggaggacagcgggggaggaggtaaacagagtagagggggagacaccccgacgagaggc
gagagaggggggagagtgcacaacggccgggctgtgatccagcagctgaagagtgtggtg
gctccatcttccttgtctggcagccccagcatcaagactgaacacgaagccctgaacacg
ggagggcgctgggggtcacacacacaaacctccgtctcgcacgcacacgcctcccagccc
tcgcacgcgcacacgccttccagcagcctcaacggcgacagccccaccaccccgatcccg
gactcctcttccagcagcgaagcccccccgaaaggcttgtttacgcccccgtccccagct
ttgtccccggccatgtccgtgtcctccccgctgccccgcgaggagagggcggtgagtcgc
agcggtggcggcggcggcggtggtggtggtggtggcgccatttcaggtaacggccctgac
tttgagctgctgcagagactggctgcgggcggcgcagcggggcgggtcctcttccacccc
cttgccctcggcccgcagggccctcagagcctctacgccccgagcactatccgctacgct
ccacctgagctgcccccctcacaccaccacagcacgggacacagcgatggcctgcagcta
cgctcggaccaccacaagggacccccacctgccttcttcccccacctacagcggctggcc
ggcctgccacccttcagcggtttctccccatccgacaaccctttctcctccggcctgccc
ttctgtatgaatggactgaggggggctgcgggcacggaggaggactga
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