Mugil cephalus (flathead mullet): 125014417
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Entry
125014417 CDS
T08342
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcep04054
]
125014417 (nlrc5)
Pattern recognition receptors [BR:
mcep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125014417 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
Atypical_Card
LRR_1
AAA_30
NOD2_WH
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
125014417
NCBI-ProteinID:
XP_047451401
LinkDB
All DBs
Position
10:complement(7294790..7322773)
Genome browser
AA seq
1923 aa
AA seq
DB search
MDEEVKPDDENVNYVLAQESKELFHILAKQPPSVIMQLYRMMPGTAGGQNQPSSPGPPVL
KDCIEAMLEYFKMASAAECCSFLQSVCLMCENIPMHLDSRLMSVAGRVITDRAPPPGTEA
VSLRNTDVCGENSGPDVTDHVPSSPLSDQHPVKRPRLDHWEQYITAATSLLQRRWKRLTE
RLVKEVQLENVWVSLRTANRGRDRPDQTPGSADRGSRTPEPDGDFGCLESRLTLETFLQG
CAGKVTALVGQAGSGKTLLMSCLGQQWANGLGPVPSSYLFVLLEFRQLNLLSRPLSLSEL
LFQHYLPPKGGDNAKRAIVDYLLSNPEQSCWVLDGYDEFHGKLSRQEMTGPLDPKTPMPV
AELISALLNRRILPGSTVLVTCRPRDAVDLGGVSDKVGQLLGWDQYDIKEYVDNFFGVKD
PSAHRDLGAWAADLLLSSRHLLAMSSIPALCNICCICLEHLLVEGTDAERPKTDGGGRAQ
RQEPGGERGRPESVVTKGENGRAPLASTQVPTTITQVYLTMLGAFVSRDSSQGGSGARPQ
ASIPPQSSVTTLDTLSQYGSELCELSRLAWRGLEESKILFVEEDIPPDVLKFSLRAGFFS
QVEVRRLDGAVVNAYCFIHLTVQEFLAALIIMTTNDVSDAHLKKRFSLKTRWTTRTDQKT
VFTDSLYLYVCGLASSHCTSALVQLSKAFGGVKGIKSWVQQRQALVLKLLKTLCNSNNLT
GPKILQLCHSVQESQDQQLARQVVGARPTLELRNIWLSPSDIDALAFVVNSAGDIGVTLD
FGACSMELDCLDVLSRCQHVHCLSFHSRKYGDKFAEKLSSVLPEFPTLRKLEFCGASVTA
TGAASLASGLENCPNITEINLTDNNLKDEGVQHIAEIFNKLPRLVSVKLGRNNTSLNAVD
SLIEKMPSCLNIQDVHADGMKEVTVTFSQNSDVKSHKLKPKPTISLLNQNWCKSEMQKLA
KTLARCPALSVLDLSGGQWDEDTLRTLTQFVPKFNVSEQITVNNSCSSVESVVVLTTLLS
DRTPASELHIRLQSPVQVSIVFPGETGKPATEIPKKLSLSCCKLLPADMERVWKSLGTSS
GLTVLDLSSNCLGNKGLKKLLEVLTHFRNLQEINASNNNINMEGVVMLASALCSHNNLTQ
IHISNGGKDELILRFSSEKSTSEKVQKTFRINNSSLLPSDITTVCRRLVKCRSQLELELS
HSSFKDKTIENLLTVLPKMLSLQKLDVSHSITSATDALTLVRCLTDNKQVTSVELSPQSE
SFITFDEVKAEQVSCRLTHFCLNGDDVERLIEILQRGPRLSDLDLSSNHLGDEGVKRLVD
SLPRLKISSYVNLSDNRLTQQGLLSVASTLCTCANVCGVEASSLGEEKRSLIWFSQNGGG
EKTLSVRESSLQPEHVVRLAEITSSCHTLAKLELKNNLLQSEWIENFVKLLNSTRRGCTI
SIEESWITAEEAVHLVHRCLSHSSNIQTIRVHQTTLNLSLKPTEPTSARGDNPDLAQSMA
TEKIGLVDCALDGYHLASLRSIIQSCPSLTELDLSNNNLGEEGAEFLCSILPSLPNLTSL
SIGAKEPVAAVVESFTQACVQSANIQDLNLSGHKFGDAATQSLTTLFPRLRSLNLSHCVW
TRTGGLQLAQALGRCVSLEDLCLDCVHLHEEGRPCLLEALRNMTSIRRLKLNKITTEMGQ
PGQSSVLDLLAALEGLGHIEEIELDGWRMADAGVEQLTGLLPVWKELKKISLSKNLISDH
SGEKLLIALKSCSRLEELHLSSNLLGDLTAASMALVLPSLTRLSVLDISDNRIGDSGSRS
LSRAIMYMKNLKKIHLTSVGTSELCAVAASLAHCPLVNDVSLSWNNCGDEVAQELSRVLP
FCLKLTRIDLECNSVSVLGAEALVRALRSCPALQLIRLWKNKVSQSDALRLMSSDRRLNF
AST
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggttaaaccagatgacgaaaatgtgaattacgtcctggctcaggaatcc
aaagaactgttccacatccttgccaaacagccaccctcagttataatgcagttgtaccga
atgatgcccggtacagctggggggcaaaaccagccgtcctcccctggccctcctgtgctg
aaagactgcatcgaagctatgctggagtacttcaagatggccagcgctgcagagtgctgc
agctttcttcagagcgtgtgtttaatgtgcgagaacatccccatgcacctggactcgagg
ctcatgtcagtggctggacgagtcatcaccgatcgtgctccgccccctggcacagaggcc
gtgtctctgagaaacacagatgtttgtggtgaaaattccggccccgacgtaacggatcac
gtcccttcatctccactttcagatcagcaccccgtcaaacggcccagactcgatcactgg
gagcagtacattactgcagcgacgagtttactgcagaggaggtggaagcgactgacagaa
cgcttggtgaaggaagtccagctggagaatgtgtgggtcagcctgagaaccgcaaacaga
ggcagggacagaccagaccaaacccctggctccgcagacagaggaagcaggacaccggaa
cctgatggggattttgggtgtttggagtcgaggctgactttggagaccttcctccaggga
tgtgctggaaaagtgacggctctggtcggccaggctggatcaggaaagactcttctcatg
tcttgtctgggacagcagtgggcaaatggactgggccccgtcccttcatcctacctgttt
gtcctgcttgagtttcgccagctcaacctcttgtcccgtcccctctccctatcggagctg
ctgttccaacactacctccctccaaaaggaggcgacaatgcaaagcgagccatcgtggac
tacctcctttccaatccagagcaaagctgctgggtcctggacggatacgacgagtttcac
ggcaaactcagcaggcaagaaatgacaggaccgttggacccaaaaacccctatgcctgtg
gcggagctcatctcagcgctgttaaatcgccggatcctcccaggaagcaccgtgctggtc
acgtgccgtccgcgtgacgccgttgatttgggcggtgtgtcggataaagtggggcagctg
ctgggatgggaccagtatgacatcaaggaatatgtggacaacttctttggcgtgaaagat
ccctcagcacaccgagatcttggagcgtgggcggccgatctcctcctgtccagtcgacac
ctccttgccatgtcttccatccccgccctctgcaacatctgctgcatctgtctggagcat
ttattggtggaaggcacagatgcagaaagaccaaagacggacggagggggccgtgcacaa
agacaggaaccgggtggcgaaagaggaaggcctgaaagcgtggtaacaaaaggggaaaat
ggcagagcgccactggcttccacccaagtccccaccaccatcacccaggtctacctcacc
atgcttggtgcttttgttagccgtgactctagccagggaggatcaggtgccagaccacag
gcctcaatacctcctcagagctctgtaaccacactggatactctgagtcagtatgggtct
gagctgtgcgagctgagtcggctggcttggagaggtttagaggaaagcaagatcctcttc
gtggaagaagacatcccgccagatgttttgaagttttcactgagggcagggttcttctca
caggtggaggtcagacgcttggatggagctgttgtcaacgcctactgcttcattcatctt
acagtgcaggagtttttggctgcactgataattatgactactaatgacgtcagcgacgct
catctcaagaagagattcagcctgaaaacacgatggacaaccagaacagaccagaagaca
gtcttcactgactccctgtacctgtatgtgtgtggcctggcttcctcccactgcacttca
gccctggttcaattatccaaggcgtttgggggagtcaagggaatcaaatcttgggtccag
cagcgacaagcccttgttctgaagttgcttaaaaccttgtgtaacagcaacaatctgact
ggaccaaagatcttgcagctctgccacagtgtccaagagagccaagaccagcaactggcc
agacaggttgtgggtgcgagacccaccctggagctgcggaacatctggctatcgcccagt
gatatcgatgctttggcttttgtcgttaactcagccggggacattggcgtcactttggac
tttggagcatgttcaatggagctggattgtttagatgtgttatccagatgtcagcacgtc
cattgcctcagttttcacagccgcaagtatggcgacaaatttgcagagaagttgtcctct
gtcctacctgagtttccgaccctgagaaagctggagttctgcggtgccagtgtgactgct
acgggagcagctagtttggcctctggactagagaactgcccgaacatcaccgagatcaat
ctaactgacaacaacctgaaagatgaaggagttcaacacatagctgagatttttaacaaa
ttgccgcgactcgtctctgtaaagctgggacgaaacaacacctccctgaacgcagtggac
agcctcatcgagaaaatgccttcgtgtttgaacatccaggacgttcatgcagacggcatg
aaagaagtgacagtaacgttctcacaaaactcagatgtgaagagccataaattgaagccc
aaacctacaatcagcttgttaaaccagaactggtgcaagtctgagatgcaaaaacttgcc
aagacactggcccgctgccctgccctatctgtcctggatctgtcaggaggccagtgggat
gaagacactttaaggactctgactcagtttgtgccaaagttcaatgtttccgaacagatc
actgtgaataacagctgctcatcagtggagagcgtggtggttctgaccactctactgtct
gaccggactcctgcctctgagctccatatcagactacagagtcctgtccaggtgtctata
gtgttccctggagagacgggaaaaccagcaactgaaatacctaaaaaacttagtctcagc
tgctgtaagctgctgcctgccgacatggaaagagtgtggaagagtctgggaacctcctct
ggtctcacagtgctggatctgtccagtaactgtttaggcaacaagggtctgaagaagctg
ttggaagtcctgactcattttagaaacctccaggaaattaatgccagtaacaataacatc
aacatggaaggagtggtgatgctggccagtgctttgtgctcccacaacaacctaacgcaa
atccacatcagcaatggaggcaaagacgagctgattctgaggttcagctctgagaaaagc
accagcgaaaaggtgcaaaagacgttcagaataaacaacagcagcctcctgccgtcagac
ataaccacagtttgtagaagattggtcaagtgtcgctcacagttggagttagagttgtct
cacagctcattcaaagacaagaccatcgagaatctactcacagtgttgccgaagatgttg
tccctgcagaaacttgatgtgagtcacagcatcacatctgcaacagatgcactaacactg
gtccgttgtttgactgacaacaagcaagtcacatcagtggagctcagccctcagagtgaa
tccttcatcacttttgacgaagtgaaagcagaacaagtgagctgcaggttaactcatttt
tgcctgaacggtgacgacgtggagcgactgattgagatcctgcagcggggtccccgactg
tctgatctggacttatcaagcaaccacctgggggatgaaggagtgaagcgtttggtggat
tctctgccaaggcttaaaatcagcagctatgtcaatctcagtgacaatcgactgacccag
caggggttgttgagtgtagcctccacactgtgtacctgcgctaatgtctgtggtgtagaa
gccagtagtttgggggaagagaagcggagcctcatctggttcagtcagaacggaggtggt
gaaaaaacgctgagcgtcagagaaagtagcttgcagcctgaacatgtggtcagattagca
gaaatcacgtccagctgtcacactttggccaaactggagttaaagaacaatttgctgcag
tcggagtggattgaaaactttgtgaagctgttgaacagcactcggagaggatgcaccatc
agtattgaggagagttggattacagctgaggaagcggttcatttagttcatcgctgtctg
agccacagcagcaacattcagactatcagggttcatcagaccacgttaaacctgtctctg
aagcccactgaaccgacttcagccaggggagataatccagatttagctcaatcaatggcc
acagagaaaattggtctcgtggactgtgcactagacggttaccatcttgcatcactgagg
agcatcatccagagttgtccttcactaacagagctggacctttccaacaacaatctgggc
gaagagggagccgagtttctctgttctattctaccttcactgccaaacctcacttctctc
agcattggtgccaaagagcctgtagcggcggtggtggagagcttcacgcaggcttgtgtg
cagtctgcaaacattcaggacctaaatctgtcaggccacaagttcggtgacgcagcaact
cagagtttgaccacactgtttccccgtctgcgatctctaaatctgtcccattgcgtgtgg
accaggaccggagggcttcagctcgcccaggcgctggggcgatgcgtcagcctggaggac
ctctgcctggactgtgtgcatctgcatgaggaggggaggccgtgtctgctggaagcttta
aggaacatgacctctatacgcagactcaagctgaataagattaccacagagatgggacaa
ccgggacagagcagcgttctggatctcctggctgctctggagggacttggacacatagag
gagatagagttggacggctggaggatggctgacgcgggcgtagaacagctgaccggactc
cttcctgtctggaaagaactcaagaagatcagcctttcaaagaatctcatcagtgaccac
tcaggagagaagctgctcatcgcgttgaagagctgcagtcggctggaggagctccatctg
tccagtaaccttcttggcgacctcaccgctgccagcatggcccttgttcttccgtcgctg
acacgtctttcagtgttagatatttcagacaaccgtatcggagacagtggatcgcgcagt
ctgtccagagcaataatgtacatgaagaacctcaaaaagattcatctgacctctgttggg
acctcggagctgtgtgctgtcgccgccagtctggcccactgtcctctcgtaaacgatgtg
agtctaagttggaataattgcggtgatgaagtggcgcaggagctctccagagtgttgcct
ttctgtctcaagctgacccggatagatcttgagtgcaacagtgtgagtgtcttaggagcc
gaggccctggttagagccttacgctcctgtcccgctctgcagctcatcaggctgtggaag
aacaaagtgtcccagagcgacgcactcaggctcatgtcgagcgacaggaggctgaatttc
gcatccacctaa
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