Mugil cephalus (flathead mullet): 125014593
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Entry
125014593 CDS
T08342
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125014593 (ighmbp2)
03012 Translation factors [BR:
mcep03012
]
125014593 (ighmbp2)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125014593 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
125014593 (ighmbp2)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
Other ribosome biogenesis factors
125014593 (ighmbp2)
Translation factors [BR:
mcep03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125014593 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
DEAD
ResIII
nSTAND3
Viral_helicase1
AAA_22
AAA_16
UvrD-helicase
IstB_IS21
Helicase_RecD
Flavi_DEAD
AAA_28
NPHP3_N
PhoH
SRP54
AAA
ATPase
AAA_31
AAA_25
ABC_tran
Zot
HEM4
Motif
Other DBs
NCBI-GeneID:
125014593
NCBI-ProteinID:
XP_047451764
LinkDB
All DBs
Position
10:complement(16104894..16110937)
Genome browser
AA seq
1028 aa
AA seq
DB search
MVQCHRRYFQEYLTDFNFKRFFLLLSRRLFRYLTRKVMAVEKFVCKTLELLQDEREAEIE
ETRIWQENVSLKDLQNKGVCLLKLQIGSQSTGLYGRTVVTLEPRKHLGFSSLPSNSFGPG
DIVGLYDTSGCTAASLINTGIVTRVTQGSINVAFDELKDGLSLDTDGLYNLLKLANDVTY
KRMKRALNALNGYSNGPAANVISVVFGDSQPSSPSQQNEIKFFNSNLDDSQREAVSFALS
QRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCAPSNVAVDNLVERLARCKAKVLRL
GHPARLLESIQKHSLDAILAQSDNANIIADIRKDIDKVFMGRKKTQEKGERVNFKREIGE
LRKELKVRETTAITQILKSADVVLSTNTGACDDGPLKFLPAEHFDWVVIDECAQALESSC
WIALLKARKCILAGDYKQLPPTIKSQAAASKGLALSLMERVIQMYGDSVVRMLTVQYRMH
SAIMDWASKEMYQGRLTAHSSVEKHLLKDLAGVTSVEETSVPLLLIDTAGCGLSEMEVTD
EQSKGNQGEVDIVELHIKALTEAGVKAKDIAVIAPYNLQVDLLRQKLSSRHPELEIKSVD
GFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHIAVVCDTQTVQNHAFLKS
LINHMTEFGEVRTAFEYIQDVVPQNYTRDHKDAKNTSASSSATSSKQKARDQPSSKAKQG
QKKSTGSKDKSSEKHTKSCTTALTEQEKNNRYAEIKAQVESFMKDLNRRDLQFPSSFNSH
DRLLVHQIAEELGLVHESKGEGSDRCITVSRPLKSAPAEEPTQEEEKEKTVEEEAVEEET
VATPQIKPSSQPSLDLKSLHLERMKREQQKREESAVKKKQQNNIHQAQGQTSKKAKGKTK
TKAGACDIAAAAAADDDFDSLISAVMKAESVCSFVKCKASVLTLGQLCMFCNRQYCLSHH
IPEVHGCGDKAKGHARMRISKEGVLYAGSGTKDKSMDPNKKAYLQRKLDSKLKDMATQRK
TKTKEKDG
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagtgtcataggagatattttcaagaatatttaactgactttaactttaaacgt
ttcttccttctgctctctaggcgtctcttcagatatttaacgcgaaaagtcatggctgtg
gaaaagtttgtgtgcaagacactggagctcctacaggacgagcgggaggctgaaatagag
gagaccagaatatggcaggagaacgtttctctaaaggatcttcagaataaaggagtttgc
ctcctgaaactgcagataggaagtcagtccacaggcctttacggccgcacagttgtcacc
ctagagccaagaaagcatctcggtttctcatctctgccaagcaacagctttggaccaggt
gatatagttggcttgtatgacacctctggatgcactgcagcctcactaatcaatacaggg
attgtgaccagggtcacccaagggtctataaatgtggcttttgatgagttaaaggatggg
ctcagtttggatacagatggtctttacaacctcttgaagttagcaaacgatgtcacctac
aaacgcatgaaacgggctttgaacgcattgaatggatacagcaatggaccggctgccaac
gtgatcagtgttgtctttggagactcacaaccttcttctccatcacaacaaaacgagatt
aaattcttcaactcaaacttggacgattcccaacgagaagctgtgtcatttgctctgtca
cagagagaactagctgtgattcatggacctccaggcaccgggaaaaccaccactgtggtg
gagatcatcctgcaagctgtcaaacaaggtcaaaaggtcctgtgctgtgccccctcaaac
gtggctgtggataatttggtggagaggttggcccggtgcaaggcaaaggtcctgaggctg
ggtcaccctgccagactgctggagtccatccagaaacattcactggacgccatccttgct
cagagtgacaacgcaaacatcatcgctgacatccgtaaagacatcgataaagtttttatg
ggaaggaagaagacgcaggaaaagggagagcgagtgaacttcaaacgagaaataggggag
ctgagaaaggagctgaaagtcagggaaacaacagccatcacccagatccttaaaagtgca
gatgttgtgttatcaaccaacacaggtgcttgtgatgacggtcctttgaagttcttgccg
gctgagcattttgattgggtggtgatagatgagtgtgcccaggccctggagagcagctgc
tggattgccctgctcaaagcacgcaagtgcattctggccggagactacaagcagttacca
cctaccatcaaatcacaagcggctgcatcaaaaggtttggctttgagtctcatggaaaga
gtgatccagatgtatggagactctgtggtgcgtatgctaactgttcagtaccgcatgcac
agcgctatcatggactgggcctccaaagagatgtaccaaggaagacttaccgctcacagc
tcggtggagaaacatctgttaaaagatctagcaggagtcacctctgtggaagagaccagc
gtgccgcttcttcttatcgacacggcggggtgtggtctgagtgaaatggaggtcacagat
gagcagtccaaaggcaaccaaggtgaggtagatattgttgaactgcacataaaagctctg
actgaagctggggtcaaagctaaagacatagctgttattgctccgtacaatctacaagtt
gatctcttacgccagaaactttcctccaggcatccagagctggagataaagtcagtggat
ggatttcagggcagagaaaaagaagctgtcgtgctgtcattggttcggtccaatagaaaa
ggtgaggttggttttctggcagaggacagaagaataaatgttgccgtcacgcgcgccaga
cgccacatcgctgtagtgtgcgacacgcagacggtccagaatcacgctttcctgaaatcc
ctgatcaaccacatgaccgagtttggtgaggtcagaacggcgttcgaatacattcaagac
gtcgtgccacagaattacacccgcgaccacaaagatgcaaagaacacatctgccagctcc
tccgctacttcgagcaaacagaaggcgagagatcagccttcgagtaaggcaaagcaagga
caaaagaaatccactggcagtaaggacaaaagttcagagaagcacacaaagtcctgcaca
acagcactgacagagcaagagaagaacaacagatatgctgagatcaaagcgcaggtggag
agctttatgaaggacctaaatcgacgtgatctccagtttccttcatccttcaactctcac
gaccgcctgctggtccatcagatcgcagaggagctgggtctcgtacatgaaagcaaaggg
gaggggagcgacaggtgcatcacagtctccaggcccctgaagtcagcaccagctgaggag
ccaacacaagaagaagaaaaagaaaaaacagtagaagaagaagcagtggaagaggaaact
gtcgcaactcctcaaatcaagccatcgtcccagccttcgttagacctgaaaagtttacat
ttggagagaatgaagagggagcagcagaaaagggaagaaagtgccgtcaagaaaaagcaa
cagaacaacattcatcaagctcagggacaaacttcaaagaaggccaaagggaagaccaag
acgaaggcaggcgcctgtgacatcgctgctgccgctgctgcagatgacgactttgactca
ctcatcagcgccgtcatgaaggctgagagtgtttgcagtttcgtcaagtgtaaagcgtct
gtgctgacactcggacagctttgcatgttctgcaacaggcagtactgtctcagtcatcac
ataccagaggttcacggctgtggagataaagccaagggtcacgcccggatgagaatcagc
aaagagggcgttctttatgctggaagtgggacgaaagacaaatccatggaccccaataag
aaggcctacctgcaaagaaagctggactctaaactgaaagatatggctacacagaggaag
acaaaaaccaaggagaaggatggttaa
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