Mugil cephalus (flathead mullet): 125014724
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Entry
125014724 CDS
T08342
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03022
Basal transcription factors
mcep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125014724 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
125014724 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125014724 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125014724 (gtf2h1)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125014724 (gtf2h1)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125014724 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
125014724
NCBI-ProteinID:
XP_047452001
LinkDB
All DBs
Position
10:complement(16395652..16402420)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERVAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHSGESTTFHFANESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLAGMNNTDTAVPNSKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSLVNQGVKNPLVDLVSLEDKTLDEGYGICTTLPSTSTANKTVKDS
SNSAIIKRFNHHSAMVLAAGSRKGEAPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQQYSTSQDIINSVNYIRHEMANYKPNL
TQVLSSSAASSAITALSPGGVLMQAGAQQAINQMVPTEVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVMKMKTNLEKFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQSAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgtcagaggaggtgctgctggtggtgaaaaaggtccgccagaggaagcag
gatgggacactatatctgatggctgaacgagttgcctggggtccagagggaaaagaccgc
ttcaccgtcagccacttatacgcagatattcgctgtcagaagatcagcccggacggtaaa
gccaaaattcagctccagctcgtccttcactccggcgagagtaccacattccactttgcc
aacgagagcagtgcgctcaaggatagagatgccgccaaggaactgctgcaacagctactg
ccaaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgctccaagaa
gatcctgtgcttttccagttatataaagacctggttgtgagccaagtgatcagtgctgag
gaattctgggccaacaggttagcgggcatgaacaacacagacaccgctgtgcccaacagc
aaacaggaagtcgggatatctggagcatttctggcagacattagacctcagacagacggc
tgcaacggcttgagatataatctgactgctgatattattgaatcaatcttcagaacatac
cccgcagtgaagcagaagtacagtgaaaatgtgcctcataacctgacggaaaaggagttc
tggacccgcttcttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagaatgtgccaagcaggatgagaaggggttgaagtctctggtgaatcaa
ggagtcaagaatcctttggttgacctcgtgtcgctggaggacaaaacattagatgagggt
tatggaatttgcacaactttgccctcaacttccactgcaaacaagacggtgaaggatagc
agcaactctgccatcataaagcggttcaaccatcacagcgccatggttcttgcagcaggc
tcacgcaagggggaggcccccactgaccaagctagtgagacgagcagcacagatggaaac
tcgagagattctgacttcttccaacctcctgtgaagaaggtgaagcttcaagaagccata
gaatacgaggatctgcaaagggaaaacaggccaaaaacagtagcgttgaacctgaagaag
tctgacaggtatgctcatggccctgtgccacttcagtcccaacagtattcaaccagccag
gacatcatcaactctgtcaactacatccggcacgagatggccaattacaaacccaacctc
actcaggtgttgtccagctccgcggctagttctgccattacagctctctctccaggtggc
gtcctcatgcaggccggagcacagcaagccataaatcagatggtgcccactgaggttcaa
ggagagttgaagcatctttacgtagctgctggagagttattgagacacttctggtcctgt
tttcccgtgaacacgccgtttttggaggagaaggtgatgaagatgaagacaaacctggag
aaatttcagatgacaaagcttcgtccgtttcaagagaaaattcagcgtcagtacttgagt
acaaatctcacggggcatttggaggagatgctgcagagtgcctatagcaagttccacatc
tggcaaacgcgtcggatgatgaggaaaacctga
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