Mugil cephalus (flathead mullet): 125014784
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Entry
125014784 CDS
T08342
Symbol
cntn1a
Name
(RefSeq) contactin-1a isoform X1
KO
K06759
contactin 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125014784 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125014784 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcep00537
]
125014784 (cntn1a)
Cell adhesion molecules [BR:
mcep04515
]
Immunoglobulin superfamily
Contactins
125014784 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcep00537
]
Others
125014784 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_4
C2-set_2
Herpes_gE_N
Interfer-bind
Sp38
DP-EP
Motif
Other DBs
NCBI-GeneID:
125014784
NCBI-ProteinID:
XP_047452124
LinkDB
All DBs
Position
10:18585573..18646362
Genome browser
AA seq
1018 aa
AA seq
DB search
MLHLTLLLHLLVLSHCRAGASVHGEAPDFYGADEATGYGPVFEEQPVDTIYPEESPEAKI
TMSCRARANPPATYKWMMGDTEIDVYEEDGHYSLAGGNLVISNPRREEHVGKYSCLATNV
YGSVLSREASVQFGYLDLFSLEERSSVYVKEGQGVVLLCAPPPHYPAELSFRWILNEFPT
FIPMDKRRFVSQITGNLYISKADSSDKGNYSCIASSPSISKSVFSNYIPLEPLAERPIRK
YPADLKVKFPDTTALVGQNITLECFALGNPVPEIRWKKIDGPLPVYHEVRLAGTQLQMYN
VQFEDSGIYRCEAMNSKGKDFHNARVTVEAFPEWVEHISSTEKQLGSDFTMSCTASGKPK
PTIRWLKNGVPIDSKEVKFSSLTLENSGMYQCIAENQHGVIYANAELRVFDCAPTFEHNP
VKGVLAPKNGRVVIECRPKAAPKPAFSWSKDTELLSNSTRVFIWEDGSLEILNVTQADEG
MYTCFVENDRGKANSTGSLVVTESTKITLAPSNADVKVGEDTWMQCAASHDPSLDITFIW
SLDGRVIDLHKDSQHYERTPNGSSNGELRIKNAQLKHAGRYTCTAQTPVDNVTASAHLVV
RGPPGAPFLVQMEKTTEKSVTLQWIRGADNHSPISKYIIQYRDQFSKDTWKNAITSPAEI
EGNAETATVVDLFPWTEYEFRVTAANTLGTGQPSSPSPVIKTLESLPVVAPSDVGGGGGD
SRELTITWTPVQPQYYYGPNFGYILAFKPKGKNDWERVVVADPQAERYVHKDPNIAPMTE
FQVKIKPFNSEGEGPYSRPAIIYSAQDIPTTAPTIVACRALSATVATVLWEPLSDVDGYQ
VSYWRSHKDGELEPQKAVVPGRENHTKLEGLKPNSHYFIEVRGFNSAGYGPPSKPFQIHT
KKPPPSRPPQIISKKLKGKSINIAWKQVEPLANESSIDGYRVLYRQQGYSTGTLYTTNKR
YIELQLPTNGTYVVEVRAHTEGGDGAMAQIELTVGAAMTIQSLSILSLLLVALLCLNL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctcaccttgctcctccatctcctggtcctttcacactgccgtgcaggtgca
tcagtccatggagaggcacctgacttttatggagcagatgaagccacaggttacgggcca
gtgtttgaggagcagccggtggataccatctaccccgaggagtcgcctgaggcaaaaatt
accatgagctgccgggccagagccaatccacctgccacatacaagtggatgatgggcgac
acagaaattgatgtgtatgaagaagacggtcactacagtttagcaggaggcaacttggtc
atcagcaaccccaggagagaagaacatgtgggaaaatactcgtgcttggctaccaatgtc
tatggctcagtcctcagccgagaagcctccgtccagttcggatacctcgatcttttctca
ttggaggagaggtcttcagtttatgtcaaagagggacagggggttgttctgctttgcgct
ccacctccacattatccagctgagttgtcattccgatggatcctcaacgaattccccact
ttcatcccgatggacaagcggcgttttgtctcccagataactggcaacctctacatctcc
aaggcggactcctcagacaaaggcaactactcctgcatcgcatccagcccatcgatttca
aagagtgttttctccaactacatcccccttgagcccctggctgaacgtcccattaggaaa
tatcctgctgacctcaaagtcaagttcccagacaccactgctttggtggggcagaatatc
accttggaatgcttcgctttggggaaccctgtccctgagattcggtggaagaagatagat
ggtcctctgccagtttatcatgaagtgcggttggctggaacccagctgcaaatgtataat
gtgcagtttgaggacagtggcatctataggtgtgaggccatgaactcaaaaggaaaggac
ttccacaatgcacgtgtgacggtggaagcttttcctgagtgggtggagcacatcagcagc
acagagaaacaactcggcagtgacttcactatgtcatgcacagcaagcggcaaaccaaaa
ccgaccatccggtggctgaaaaatggagtaccgattgactcaaaagaggtgaagttcagc
agtctgacactggaaaattcaggcatgtaccagtgcatagcagagaaccaacatggggta
atttatgccaatgcagagctgcgtgtgtttgattgcgctcctacttttgaacacaaccca
gtgaagggagtcctggcgcctaaaaatggacgggtggtgattgaatgtcgacccaaggcc
gccccaaagcccgccttctcgtggagcaaagacactgagctgctgtccaactccaccagg
gtcttcatctgggaggatggaagcctagagattctcaatgtgacgcaagcagatgaaggc
atgtacacctgcttcgtggagaatgaccggggcaaggccaacagcacaggctctctggtg
gtaacagagtccacaaagatcaccttggctccatccaatgctgacgttaaagtgggagaa
gacacctggatgcagtgcgctgcatcacatgacccctctctggacatcaccttcatctgg
tccctggacggccgagtcattgacctccacaaggacagccaacattacgaacgaaccccg
aacggaagctcaaacggcgagctgcggattaagaacgctcagctgaaacatgctggacgc
tacacctgcaccgcgcaaaccccagtggacaacgttactgcctctgcccacctggttgtc
aggggtcctcctggtgctccgtttttggtgcaaatggaaaaaaccactgagaagagtgtt
acgttgcagtggatccgcggcgcagacaaccacagccctatctccaaatatatcatccag
tacagggaccagttctcaaaggatacctggaagaatgccatcacatctccggctgaaata
gaggggaatgcagagacagccacggtggtggatttgttcccctggacagagtatgagttc
agggtcactgctgccaacactctgggaacaggacagccgagcagcccatcacctgtaatc
aaaaccctggaatcacttcctgtggtggcgccctcggatgtcggcgggggtggaggggat
agcagagaactgaccatcacgtggacgcctgtacagccacaatactactatgggccgaac
tttggctacattttggccttcaaacccaaaggcaaaaacgactgggaaagagtggtggtg
gctgatccccaggccgagcgctatgtccacaaagatcccaacattgcccctatgacggag
tttcaagtcaaaattaaacccttcaacagcgaaggagaagggccgtacagccgaccagcc
atcatttattccgcacaggacattccaactacagctcctacaattgttgcctgcagagct
ctgtctgccacagtggccaccgtgctgtgggagcccctctctgacgttgacggataccag
gtgagttactggagaagtcacaaagacggtgaactggagccacaaaaggctgtggtgccc
ggaagggaaaaccacaccaaactggagggcttgaagcccaactcgcactacttcattgaa
gttcgaggcttcaactccgctggatacgggccacccagcaagccctttcagatccacacc
aagaaaccccctccaagtcgacccccacagataataagtaaaaagttaaaaggaaagtca
ataaatattgcctggaagcaagtggaaccgctggctaacgagtcatcaatagatgggtac
agagtgctgtacaggcagcagggttactccacgggcacactgtatacaaccaacaagcgg
tacatagagcttcaactgcctacaaacgggacctatgtggtggaggtccgggcacacaca
gaaggaggagatggggctatggcacaaattgaactcacagttggagctgccatgaccatc
cagagtctcagcatcctctccctgctcctggtggctctcctctgcctgaacctctga
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