Mugil cephalus (flathead mullet): 125015028
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Entry
125015028 CDS
T08342
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125015028 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125015028 (edc4)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125015028 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
125015028 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EDC4L
WDR55
RMC1_N
PIN_8
Motif
Other DBs
NCBI-GeneID:
125015028
NCBI-ProteinID:
XP_047452617
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All DBs
Position
10:complement(7783451..7809022)
Genome browser
AA seq
1410 aa
AA seq
DB search
MASNSNIDIEGATQHLRDILKLDRPGNSAAQYILSMSSSDVQTNEGQRKPSFNGELNGLL
GVGLLGSTDRSTMSETSRPISTDMSCSQETKKICLSGDDGSTCIPITSNNVEIVASQDSS
INSKARGSNKVKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGANNHAMIRVLSVEFAE
RSLLKGFTGAVTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTGSKILDQIVVHIRRPEDTP
LNSHRRLIWCPFILDDNEENQDDTSQTLALLHEDRAEVWDLEVLRANNTSWPVDDTELKD
GLITIKGHTQRVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPSFPSSPSSRCLHE
LRPHGGRPLSCLLFCDNHKRQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPD
PLNSTLPSLKASLDLSSEYLILTDVQRKVLYVMELRQDLDKGKAGFTAVSEFLLTHPVLS
FGVRDVSHSRLRHTEVLPAEEESESMTTEGTQGPTESKSGIQIKLYCVHTKSLQDVQILF
QPSAGSSSPAFLPHSDSQDGLAGFSDHLTDQSSDKDSGSGSQTDLRKIPSLPAPSDFLSN
SATSSGAMPKLMTPDAFMTPSTSVPASPGSSASSLTIVTAISSNSDSTNRAMDDVSQSPN
RADNSSSSSLTLSASTSSPRAASAVLLPGLENLQALASPSGSLALDNPQVLDSPLLPPLG
SPTRARSPDVISSASTAMSQDMPEIASQTLQLQRGLLPSLEPLSLSALQTDSMASAASAL
HLLTSPRTANNNNLLPLELGGADGPVGGAAESEPRLSHTPSLLENALSQENPGAGGGSSD
GSVGHTSWPAAPDITRETRNSLRDNGLVDCSREESKERHLSSPYHRRSYHLTQNDSQDAG
TEQSDPDDEVASLASSSGNCGSRSSHRLPVKDWKASPRGSPKVKRKIKKDDGESSQARHM
DSAQFNTEVQDELLMLLRSQQRELTELRGQIETMQSSIMAQVEHVLTNHQEQEHHRLERV
LAESQNHQQQLQEQLSQQLSHALGSALTSRMDKVLRDEMKKTVPQTISKSLEPVTGQLSN
TIAARLAAVEVILKDNVVKVAKSKNTTDAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFER
GCQSMFQQINDSFKQGTQEYIQQLETHMKNKKQREQDTRDPMVGQLQQMIDSFQSSTDQL
ANNITANVRAEVQHQIQMMVGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRS
AAGTPVPTAHLDYQTQQANILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQ
HPCPLSQPVLLSLIQQLSSNLSTRSELKMSYLEDAIMNLDHGDPLTRDHMSSVLAQVRPK
LFTFLQQDPHSPLSKRARRLIMMLQGLVNH
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattctaatatcgatatcgagggtgcgacccagcatctccgggacatcctc
aagctagaccgtcccgggaacagcgccgcacaatacattctttcaatgtcttcctcagat
gtccaaacaaatgaaggccagaggaagccttctttcaacggagagctcaacggcttattg
ggagtcgggctgctggggagcactgatcggtcaaccatgtcagaaactagcagacccatc
tctacagatatgagctgctctcaggagactaagaaaatctgtctttctggtgacgacggg
tctacctgcatccccatcacctcaaacaacgtggagattgtggcaagtcaagattccagc
atcaacagcaaggctcgaggcagcaacaaggtgaagattcagccggttgccaagtacgac
tgggaacacaagtattattatggcagactgatagctgtgtccaactccttcctggcctat
gccatcagaggagccaacaaccatgcaatgatccgtgtcctgagtgtggaattcgctgag
cgctccctgctcaaaggattcaccggggccgtcacagatctggcttttgcccacctcgac
tcctccctgttgggctgtgtagacgaagcgggcaacctgatggtctggcagctcacctgc
actggaagcaagatactagatcagatagtggttcatatccgacgaccagaagacacccca
ctgaactcccaccgccgcctcatctggtgcccgttcatcctggatgacaatgaagagaac
caggacgacaccagccagaccctggcccttttacatgaagacagggctgaggtatgggac
ctggaagtcttgagggcaaacaacaccagctggcctgttgatgacacagaactgaaagat
ggcctcatcacaatcaaaggacacactcagcgagtcagcgaaggtgcactgtctccagat
gggacggtgttagccacagccagccacgacggatacatcaagttctggcagatatacatc
gaggggggacaggacaagcccagttttccttcctctccgtcatccaggtgtcttcacgaa
ttgcggccacacggaggacgtcccctctcttgtctacttttctgcgacaaccacaagagg
caggacccagaggttcctttctggaggtttctgataactggagcagaccagaaccaggag
ttgaagatgtggtgcactgtttcttggacctgcttacaaaccatcaggttttctccggat
ccgttaaactcaaccctgccaagcctcaaggccagtctggatctgtcttctgagtatctg
atcctcaccgacgtccagaggaaggttttgtacgtgatggagctacgacaggacctggat
aaaggaaaggcgggtttcacggccgtgtcagagtttttgctgacccaccctgtgcttagc
tttggggtcagggatgtgagccacagccggctgcgacacaccgaggtcctcccagcagag
gaggagagcgagagcatgactacagaaggaactcaaggacccaccgagtccaagtccggg
atccagattaaactctactgtgttcacactaagagtctgcaagatgttcagatcttgttt
caacccagtgctggttccagttctccagccttccttccacattctgattctcaggacggc
ttggccgggttttcggaccatctcactgaccagagctctgacaaggactcggggagcggc
tcccagactgacctaaggaagatcccatcgcttcctgctccctctgacttcctgtcgaac
tctgccaccagcagcggagcgatgcccaagctgatgacgcctgacgccttcatgacacca
agcacttcggtacctgcgtctcctggcagcagcgctagcagcctgaccatagtgaccgct
atcagtagcaactctgactcaactaacagagctatggacgatgtcagtcagagtcctaac
agagcagacaatagcagcagtagtagtctgactctctctgcctccaccagcagccccaga
gctgcttctgctgtgctgttgcctggactcgagaacctacaggctttggcatccccaagt
ggttccctggcactagacaaccctcaggtcctggattctcctctcctgccgccgctgggc
tctccgacgagggcccggtcacctgacgtcatctcctcggcctccacggccatgtcccag
gacatgccagagatcgcctcccagacgctgcagcttcagcgcggattactgcccagcttg
gagcccttatctctgtctgccctccagacggacagcatggcctctgccgcctctgctctg
cacctactgacttcaccacgcactgccaacaacaacaacctgctaccccttgaactcgga
ggagcagacggacccgtgggcggggcagcagagtcagagcccagactcagccataccccg
tctctacttgagaacgcgctatcgcaagaaaatcccggggcgggcggagggtcttcggat
ggcagcgttggccacacctcttggccggctgcgccagacatcaccagggaaaccaggaac
agcctcagggacaacggtcttgtagactgttcaagagaggagtcgaaggagaggcacttg
agctcaccttaccatcgacgctcttatcacctcacgcagaacgacagtcaggatgccggc
accgagcagagtgaccctgatgatgaggtggccagtctagcgtcatcttctggaaactgc
ggctctcgctcttctcacagactaccggtgaaggactggaaggcttcacctcgaggctca
ccaaaagtgaaaaggaagatcaagaaagatgacggtgaatcatctcaggccaggcacatg
gactctgctcagttcaacacggaggtgcaggatgagttgctgatgctgctgcgtagccag
cagagggagttaactgaactacgagggcagattgaaaccatgcagagctccatcatggct
caggtggaacacgtcctgacgaaccaccaggaacaagagcaccacagactagagcgagtg
ctggcggagagtcagaatcaccagcagcagcttcaggaacagctcagccagcagctcagc
cacgccctgggctcagcgctgaccagcagaatggacaaagtgctgcgggatgaaatgaag
aagacggtcccacagacgatctctaagagtctggagccggtgacgggtcagctgagcaac
acgatcgctgccaggctggccgccgtggaggtcatcctcaaggacaacgtggtgaaggtg
gccaaatccaaaaacacaacggatgcgatcggtcgagcagcggctgaagcgatgcaggga
cccatccaagcagcctacaaagacgccttccagagcatcgtgctgcctgtttttgaaaga
ggctgccagtccatgtttcagcagatcaatgacagcttcaaacagggcacacaagaatac
atccagcagctcgagactcatatgaagaacaaaaagcagagagagcaggacacgcgagac
cccatggtcgggcagctccagcagatgatcgactccttccaaagctccactgatcagctc
gccaataacatcacagctaatgtccgggctgaggtccagcaccagatccagatgatggtg
ggaaacttgcaggagtctattcttagccacgtgcagcggattgtcaaaggagaggtgagc
ctggccatgaaggagcagcaggcggtcgtcacctccagcatcatgcaggcgatgaggtcg
gcggccggcacgcccgtccccacagcgcacctcgactaccagacgcagcaagccaacatc
ctgcagctcctccagcagggccagctcaaccaggctttccagcaggctctatctgcaaca
gatctgaacttggtcctgtacgtgtgcgagaccatcgactctcagcaggtgttcggtcag
cacccctgtcctctcagccagcccgtgctgctgtccctcatccagcagctttcttccaac
ctctcaacccgctctgagctcaagatgagctacctggaggacgcaataatgaacctggac
cacggcgaccccctgaccagagaccacatgtcttcagtgttggcccaggtcagaccgaag
ctcttcaccttcctgcagcaggacccccacagcccgctgagcaagagggcgcggcgcctg
atcatgatgctgcagggactcgtcaaccactag
DBGET
integrated database retrieval system
