Mugil cephalus (flathead mullet): 125015082
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Entry
125015082 CDS
T08342
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03020
RNA polymerase
mcep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125015082 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
125015082 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125015082 (polr2c)
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125015082 (polr2c)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125015082 (polr2c)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125015082 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
125015082
NCBI-ProteinID:
XP_047452695
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All DBs
Position
10:complement(1566084..1570969)
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AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSLRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKLQYSRDCTCDDFCAECAVELTLDVRCTEDQTRHVTSRDL
LSNHARVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagcccacggtgaaaataacagaactcacggacgaaaatgtcaag
tttgtcatcgaaaacactgacttggcagtcgcaaactccctgcgccgcgtcttcatgtca
gaagttcccacaatagcgatcgactggatccagatcgacgccaactcctcggtgcttcac
gacgagttcatcgcgcacagagtcggactcatccccctcacgagtgacgacatcgtggac
aagctgcagtactccagggactgtacctgtgatgatttctgtgcagaatgcgccgtggag
ctgacgctggacgtccgatgcaccgaggaccagacccgtcacgtcacctcccgggacctg
ttgtccaaccacgccagagtcatcccggtgacgtccaggagcagagacaacgaccccaac
gactacgtggagcaggacgacattctgctggtgaagctgcgtaaaggccaggagcttcgg
ctcagagcttacgctaagaaaggcttcgggaaggaacacgccaagtggaacccgacggcg
ggggtgtccttcgagtacgacccggacaacgccctgagacacacggtctacccccggccc
gaggagtggccgaagagcgaatactctgagatagaagaggacgaggttcaggctccgtac
gaccccaacgggaaacctgaaaggttctattacaacgtggagtcgtgtggttctctgcgg
ccggagaccatcgtcatgtcggcgctggccgtcctgaagaagaagctgagcgacctccag
acgcagctgagccacgagatccagagcgacgtgctcaccatcaactga
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