Mugil cephalus (flathead mullet): 125015320
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Entry
125015320 CDS
T08342
Symbol
cftR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep02010
ABC transporters
mcep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125015320 (cftR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125015320 (cftR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcep02000
]
125015320 (cftR)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
125015320 (cftR)
Transporters [BR:
mcep02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
125015320 (cftR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
DUF87
AAA_16
nSTAND3
MMR_HSR1
T2SSE
FtsK_SpoIIIE
AAA_23
NB-ARC
Dynamin_N
Zeta_toxin
MeaB
nSTAND1
Motif
Other DBs
NCBI-GeneID:
125015320
NCBI-ProteinID:
XP_047453028
LinkDB
All DBs
Position
10:24421019..24455577
Genome browser
AA seq
1512 aa
AA seq
DB search
MQKSPVEDANFLSKFFFWWTSPLLRKGFRQKLDLTDVYKAPSFDLADNLSERLEREWDRE
VVSAKNKPRLMRALARCFFGPFAFFGVLLYLGEASKTVQPQLLGRIIASFDPFHAPERSQ
GYFLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIVQAW
LSQKMGPHRVKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVKKIEEFLMKEEYRVLDYNLTTTEVELVNVSASWDEGIGELFEKIKQESKAN
GHMNGDAGLFFTNLYVTPVLRNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPTEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEYRYTSIIKACQLEEDFALLPEKDKTLL
FEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCICKLMASKTRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSDLQAERPDFSSLLLGLEAYDNINAERRSSI
LTETLRRVSVDETAGFRGQEAKRQSFRQAPPSVIVSGSQSHPVGDGYPEKRKHSLILNPL
AAARKFSFIGNSQQTGNTPQSSAIDDGVRELSERKFSVVPEDDQVEEVLPRSNMYNHGLQ
HLNGQRRQSVLAFITNAQGHERREQMQSSFRRKLSITPQCDLASELDIYARRLSKDSVYD
ISEEVDEEDMEQCFADERENVFETTSWSTYLRYITTNRSLVYVLIFILFVFVIEVAGSVI
GIFLITDTIWRDGANPSSPNYIDEQHPNASSPPVHLAVIVTPTSAYYIIYIYVATSESVL
ALGCFRGLPLVHTLLTVSKRLHEQMLSAVLRAPMAVLNTMKSGRIMNRFTKDMATIDDML
PLVLFDLIQLTLIVTGAIFTVSIIRPYIFIAAIPLAVIFIALRKYFLRTGQQLKLLEAEA
RSPIFSHLIISLKGLWTIRAFGRQTYFEMLFHKALNTHTATWFHYLATLRWFLFRCDMIF
VLFFTAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFKFI
DLPSEEPLPEKSGGKGGPDLVIDNPHAHDCWPNRGQMDIQGLTVKYTEAGRAVLNDISIS
VDGGQSVGLLGRTGSGKSTLLSALLRLASTDGEISIDGVSWSSVSLHTWRKAFGVVPQRV
FILTGTFRMNLDPHGRYSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGSVLSNGHKQL
MCLARSILSKARILLLDEPSAYLDPITLQVLRKTLKQAFSGCTVILSEHRVEPLLECQTF
LMIEGSSIKSYDTIQKLMNEMSHLKQAMSPADRLRLFPTLHRLNSGKRAPPPAAKISSLP
EEAEDEVQDTRL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccggtggaagatgcgaacttcctctccaagtttttcttctggtggaca
tcacctctgttgaggaagggcttcagacagaagttggatctgactgatgtgtacaaggcc
ccttcttttgatctggcagacaacctctctgagagactcgaaagagaatgggacagggag
gtggtgtcggccaagaacaagcccaggctgatgagagcactggcccgctgcttcttcggc
cctttcgccttctttggtgtcctcctctacctaggggaggcttccaagacggtccagcct
cagcttttaggtcggatcattgcttcctttgacccgttccatgctccggagcgaagccag
ggatatttcctggccctggggctatgtctcctcttcactgcccgcttcctcctgttacag
cctgccatctttggcctgcatcacctgggcatgcagatccgaattgccctgttcagcctc
atatacaagaagaccttgaagctgtccagccgagtcttggataagatcagcactggtcaa
ttggtcagtctgatgtctgcccatctcaacaagctggatgagagtctgggtctggcccac
tttgtgtggatcaccccgctgcaatgtatattgtgtgtgggtctgatctgggagctgatt
gaggtgaatggattctgcgctctggcagcactgactcttctgggcatcgtccaggcctgg
ctctcccagaagatgggacctcatagggtgaagcgagcagggatgatcagccgccgactg
gctctcacctcagagatagtggagaacattcactcagtgaaggcgtacggctgggaggag
gtgatggagacaatcatcaaaaacattagacaggatgagatgacgctgacgaggaagatc
ggctctctgcggtacttctacagtgcctcctacttcttctctgccatcttggttatcgtg
tcggccatcgtgccccacgcgctcagcaaaggcatcatcctgcgtcgaatattcaccacg
gcctcctattgcatggtgctacgaatgacactgacccgccagctgccaggttccatccag
atgtggtatgacacgctggcactagtcaagaagattgaggaattcttgatgaaggaagaa
tacagagtgttggactataacctgactaccactgaagtggagctggtcaatgtgtctgca
tcctgggacgagggtattggtgagctgtttgagaagatcaagcaagagagcaaagctaat
ggacacatgaacggtgacgccggactgttcttcaccaacctctacgtcacacctgtcctc
agaaacatcagcctgtacctggagaaaggcaagatgctggcggtggctggttccactggc
tcaggaaagagttcactgctcatgatgatcctaggagagctggtgccaacagagggtaaa
atcagacacagcggccgtatttcattctcaccacagacgtcttggatcatgccagggaca
attcgtgacaacatcctgtttggcctgacctatgacgagtatcgctacacctccatcatc
aaggcctgtcagctggaagaggacttcgccttgctgcctgagaaagacaagacgctcctc
tttgaaggaggggtgaccctcagcggcggtcaaagagcacgcctcggcctggccagggct
gtgtataaagatgcagacctctacctgctggatgcacctttcacccacctggacatcgtg
acagagaaagagatctttgagaaatgcatctgcaaactcatggcctccaagacgcgtatt
gtggtcaccagcaagttggagcatctcaaacgagcggataaaatccttctcctccacaac
ggagactgttatttctacggcaccttctcagacctgcaggccgagcgcccagacttcagc
tccctcctgctcggtctggaagcttatgacaacattaacgcagagcggcgcagctccatt
ctcacagaaactcttcgccgggtctcagtggacgaaaccgctggttttcgagggcaggaa
gcaaaacgtcaatcgttccgccaggcaccaccttcagtaattgtttctgggtctcagagc
catccagtaggtgatgggtacccagaaaaacgtaaacactcccttattctaaatcctttg
gcagctgcccgcaagttctccttcattgggaactcccagcagactgggaacacaccgcag
tcctcggcaatcgacgacggggtccgtgaactttcagagagaaaattctctgtggtacca
gaggatgatcaagtggaggaggtgctcccaaggagtaacatgtacaatcatgggttgcag
catctcaacgggcagaggcgccagtctgtcttggcattcatcacaaatgctcagggccat
gagcgcagagaacaaatgcagtcgtccttccgaagaaagctgtccatcactccacagtgc
gatttggcttctgagttggacatttacgcccgccgcctgtccaaggacagtgtctatgac
attagtgaggaggtggacgaggaagacatggagcaatgctttgcagatgaacgcgagaat
gtgtttgaaactacctcatggagcacttacctacgctacattaccaccaataggagcttg
gtctacgtcttaattttcatcttatttgtctttgtcattgaggttgccggttctgtcatt
ggcattttcctcattactgacacaatctggagagacggcgccaacccttcatcacctaac
tacattgatgagcagcaccccaacgcctcgtcgccccctgtccacctggctgttattgtc
acaccgaccagtgcttactacatcatctacatctacgtagccacgtcggagagcgtgctg
gccttgggatgcttcaggggtctccccttagtgcacacactactcactgtgtccaaaagg
ctgcatgagcagatgcttagcgctgtgctacgagcccccatggctgtgctcaacactatg
aaatcaggccggatcatgaacagattcaccaaggacatggccaccatagatgacatgctg
cctctggtgctgtttgacctcatccagctgacgctaatcgtcacaggagccatcttcact
gtgtccatcatacggccgtacatcttcatcgctgccatcccgttggctgttatcttcatt
gcgctcaggaagtacttcctacgaactggacagcaactcaaactactggaggctgaagct
cgtagccccatcttctcccatctcatcatctcactaaagggcttgtggacgattcgggca
tttgggcgtcagacctactttgagatgctcttccacaaggccctgaacactcacacggcc
acctggttccactacctggccacactgcggtggttcctcttccgctgcgacatgatcttc
gtcctgttcttcaccgccgctgccttcatcgccgtgggaaccaaccaggacaaaccaggg
gagattgggataattgttgccctggccatgctcatcctggggactttccaatgggctgtc
atcaccagcatcaccgtagacgggctgatgcgttctgtggatcgggtgttcaaattcatt
gacctgccatcagaggagcctttgccagaaaaatctggaggtaaaggaggtcctgacctt
gtcattgacaaccctcacgcccatgactgttggcccaaccgcggccagatggacatccag
ggcctcaccgtcaaatacacagaggctggacgtgccgtcctcaacgacatctccatctct
gtggacgggggacagagtgtgggtctgctgggtcgaacgggttcagggaagagcaccctg
ctgtctgctctgctgcgcctcgcctccaccgatggagagatctctatcgacggcgtttcc
tggagctccgtctccctgcacacgtggaggaaagccttcggagtggtgccgcagagagtc
tttattctgacggggactttccggatgaacctggacccacatggacgttacagtgatgag
gagctgtggagagtggccgaggaggtgggtctgaagtcagtgatcgagcagttcccagac
aagctggactttcagctggaggacgggggcagcgtgctgagcaacggacacaaacagctg
atgtgtctcgcccgctccatcctgagcaaggcccgcatcctgctgctggatgagccttcc
gcctacctcgaccccataacactgcaggtcctgaggaagacgctgaagcaggcgttttct
ggctgcaccgtcatcctgtcagaacaccgggtggagccgctgctggagtgtcagacgttc
ctgatgatcgagggcagctccataaagagctacgacaccattcagaaactgatgaacgag
atgagtcacctgaagcaggccatgagcccggccgaccggctccgcctcttcccgacgctt
caccggctcaactccggcaagagggcaccgccaccggccgccaagatctcctccctgcca
gaggaggccgaggacgaagtccaggacactcgactctga
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integrated database retrieval system
