Mugil cephalus (flathead mullet): 125015468
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Entry
125015468 CDS
T08342
Symbol
utp4
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125015468 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125015468 (utp4)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125015468 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_VPS8
CPSF_A
Lactonase
DUF7165
PROPPIN
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Ge1_WD40
Frtz
Motif
Other DBs
NCBI-GeneID:
125015468
NCBI-ProteinID:
XP_047453323
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Position
10:753581..767212
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AA seq
675 aa
AA seq
DB search
MGEFKVHRVRFFDYMPSAVRAMAFNRETERLAVARDDGALEIFNFSDNYFQEKVIPGRDG
RAVEALCWVGRRLFSAGLNGEITEYDLENLRPRYSVEVYGGPVWALSSNSRGTQLAVGCE
DGTVKMFEILDEKIQFHRNLERQKGRIISLSWHPSGAQIAAGTMDMIRIFDAETGGTHAV
DRAWGVXEQRGVVWRYLVDHTVLSVNSAGVQVDGRTGPVRTHLVTMGVLALSLFKDESSV
IAGTSEGTVVQFQFVSSTADRPDKEWVRTRTFKNHSHDVRALVHTDTAVVSGGMDTQLVV
RPLLDKVEKNTQESALRRITFPHRSLVSCARKAGLLLFQFPDHLELWRLGESDGHGSPGE
SLPVKRKPEKLLQLKRKGDDHICCSALSPCGGWLVYSTVSSVRLYRLQYDNNNISINKVS
KLPRELRWASQLCFSSDSSRLFASSSQSSVVVVSVDQLEIKHLHTLRHKSGSRGPAHLLV
ASDDGKWLATGNTDGEIHVYNVPKMKLHCTVPLYSSCPTAIAIHPTTSNLVSVHADQQIL
EFSLRQKEYTEWSRTLQKQGLHSLWLQRDTPVQHVAFNPKNPAHVVLNDTFMFCIIDQSL
PLPEAKSMLYNQMTLRSLPAPDRMRQSHAFKICKTFQNLLSVRLLEDMSLVVVERPLLDI
VSQLPAPVRQKKFAT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcaaggttcaccgcgttcgcttcttcgactacatgcccagcgccgtccga
gccatggccttcaacagggagacggagcgtctggccgtcgcccgggacgacggggcgctg
gagatcttcaacttctctgacaactacttccaggaaaaggtgatcccggggcgggacggc
cgggccgtggaggctctgtgttgggtgggacggcgtctcttcagcgccgggttgaacgga
gagatcacagagtacgacctggagaacctgaggccccgctacagcgtggaggtctacggg
ggtccggtctgggccctgagcagcaacagccgggggacacagctggcggtcgggtgtgag
gacgggacggtgaagatgtttgagatactggacgagaagattcagttccacaggaacctg
gagagacagaaaggtcgaatcatttctctgtcctggcatccgtctggagctcagatcgct
gctggaaccatggacatgatccgaatctttgacgccgagacaggtgggacccatgctgtg
gaccgagcgtggggcgtctaagagcagagaggtgtggtctggaggtaccttgtcgaccac
accgtcctcagcgtgaactcggcgggagtccaggtcgacggacgcacgggtcctgtcagg
actcacctcgtcacaatgggagtcctggctctgtcactttttaaggacgagagcagcgtc
atcgctgggacgtctgaggggacggtcgtccagttccagttcgtctcctccaccgcggac
cggccggataaggagtgggtcagaaccaggacctttaaaaaccattcacacgacgtgagg
gcgctggttcacacggacacggccgtggtgtccggagggatggacactcagctggtggtg
agacctctgctggacaaggtggagaagaacacgcaggagtcagcgttacgcagaataacc
ttcccacacaggagtctggtcagctgtgccaggaaagccgggctgctgctcttccagttc
cccgatcatctggagctgtggaggctcggagagagcgacggacacggaagtcctggagag
agtctgcctgtgaagaggaaaccagagaaactcctccagcttaaacgaaagggagacgat
cacatctgctgcagcgctttgtctccgtgtggaggctggttggtttactccaccgtctcc
agcgtccgtctctacagactccagtacgacaacaacaacatcagcatcaacaaggtgtct
aaactccccagggagctccgctgggcctcccagctctgcttctcctccgactcctccaga
ctcttcgcctcctccagtcagtcgtcggtcgtggtcgtttctgtggatcagctggagatt
aaacaccttcacaccctcagacacaagtcagggtcccgggggccggcccacctgctggtt
gccagtgacgacggtaaatggttggctacagggaacacggacggagagatccacgtctac
aacgtccccaagatgaagctccactgcaccgtccccctctacagctcctgtcccacggcc
atcgccatccaccccaccaccagcaacctggtctcagtccacgcagaccagcagatactg
gagttctctctgcgtcagaaggaatacaccgagtggagccggacgctgcagaaacagggg
cttcactctctgtggctgcagagggacacgcccgtccaacacgtcgccttcaaccccaag
aacccggcgcacgtcgtcctgaacgacaccttcatgttctgcatcatcgaccagagtctg
ccgctgcctgaagcgaagtcgatgctctacaaccagatgaccctgaggagtctcccggcg
ccggacaggatgagacagagtcacgccttcaagatctgcaagactttccagaacctcctg
agcgtccgcctgttggaggacatgtccctggtggtggtggagcgccccctgttggacatc
gtgtctcagcttcctgctcccgtccgtcagaagaagttcgctacatga
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