Mugil cephalus (flathead mullet): 125016406
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Entry
125016406 CDS
T08342
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125016406 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcep03310
]
125016406 (nr1d2a)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125016406 (nr1d2a)
Nuclear receptors [BR:
mcep03310
]
1. Thyroid hormone like
1D. Rev-Erb
125016406 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
125016406
NCBI-ProteinID:
XP_047454839
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Position
11:complement(24731390..24736960)
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AA seq
587 aa
AA seq
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MPEDIGTAKPVSAGGVIAYISSSSPESCPSGGYMSTSPPSSRPSLPSRAVGMVVDIAPPA
KNARSMEKAGRSSTSSKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQ
NIQYKKCLKMENCTIMRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQN
AMNNMMSNNSQLHGMLHGHQSPPLPMDATSTDGAPSSSASASPSSSSSSSSSSSASDSPS
CSNPSSPQCPQDSESVVSMDTNSSSASSCGSDSGEDEAVGTPRQQRSPVTLETGCDGNSS
SMEEQQGSWGCWDDNAAAVAAAAAEGNRFSHYGGQRITNAAYREERGVYQQLNGAPGCEA
TQRQNELNAQTSSSGYSEPSGCPSSRAHLVCPMNTSPYVDPRKPSQEIWEEFSMSFTPAV
REVVEFAKRIPGFRDLPEHDQVGLLKAGTFEVLMVRFASLFNVAERTVTFLSGRRYSLDA
LRSLGAGELLNSMCEFSEKLAALRLDADEMSLFTAVVLVSADRSGIQDLNSVEALQDKLI
RALRNQVMQNHGDESSTTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagacattgggacagccaagccagtgtctgcaggaggagtcattgcctacatt
tcctccagcagcccggagtcttgtccgagcggcggctacatgtcgacgtcgccgccctcg
tcgcgtccgtcgctgcccagtcgggccgtcgggatggtggtggacatcgctccgcccgcc
aagaacgctcgcagcatggagaaggccggacgctcgtccacgtcctccaagagcagcatc
acgaaaatcaacggcatggttctgttgtgcaaagtgtgcggtgacgtggcctcggggttc
cactatggcgtccacgcttgtgagggctgcaaggggttcttcaggagaagcatccagcag
aacatccaatacaagaagtgtctcaagatggagaactgcaccatcatgcggatcaacagg
aaccgctgccagcagtgtcgcttcaagaagtgtctgtcggtcggcatgtccagagacgct
gttagattcggtcgcatcccgaagagagagaagcagaggatgctgctggagatgcagaac
gccatgaacaacatgatgagcaacaatagccagctgcacgggatgctgcacggccaccag
agcccgccgctgcccatggacgccaccagcaccgacggcgccccctcctcctccgcctcc
gcttccccttcctcctcctcctcatcctcctcctcctcctccgcttccgattcgccgtca
tgttccaacccctcctcgccgcagtgcccccaggactctgagtcggtggtctccatggac
accaactccagctcggcgtcttcctgcggctcggacagcggcgaggacgaggccgtcggc
acgccgaggcagcaaaggtcgcccgtcaccctggaaacgggatgcgacggcaacagcagc
agcatggaggagcagcagggcagctggggctgctgggacgacaacgccgcggcggtggcg
gcggcggcggccgaaggcaaccgcttcagccattacggcgggcagcgcatcaccaacgcc
gcctacagggaggagaggggcgtttaccagcagctcaacggcgcccccggctgtgaagcc
acacaaagacagaatgagctgaacgcacaaacttcctcaagcggttacagcgaaccaagc
ggctgcccgagcagcagagcacacctggtgtgtcccatgaacacttcaccttacgtcgac
ccccgaaagcccagccaggagatctgggaggagttctccatgagcttcaccccggccgtg
cgcgaggtggtcgagttcgccaagaggatcccgggcttccgagacctccccgagcacgac
caggtcggcctgctgaaggccgggaccttcgaggtgttgatggtccgattcgcctccctt
ttcaacgtggccgagcggacggtgaccttcctgagcgggcggcgctacagcctggacgct
ctgcggtcgctgggcgccggagagctcctcaactccatgtgcgagttcagcgagaagctg
gcggccctgaggctcgacgcagacgaaatgagcctcttcacggctgtggtgctcgtctca
gccgatcgctcagggatccaggacctgaactcggtggaggcgctgcaggacaaactgatc
cgggcgctgaggaaccaggtgatgcagaaccacggggacgagtcgtccaccaccttcacc
aagctgctgctcaagcttcccgagctgcgttcgctcaacaacatgcactcggaggaactg
ctctcgttcaaagttcacccttga
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