Mugil cephalus (flathead mullet): 125016518
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Entry
125016518 CDS
T08342
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04621
NOD-like receptor signaling pathway
mcep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125016518 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125016518 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcep04054
]
125016518 (nod1)
Pattern recognition receptors [BR:
mcep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125016518 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
LRR_6
NOD2_WH
NPHP3_N
AAA_16
LRR_8
AAA_22
ATPase_2
RNA_helicase
AAA_30
ABC_tran
PIF1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125016518
NCBI-ProteinID:
XP_047455003
LinkDB
All DBs
Position
11:complement(24601397..24616464)
Genome browser
AA seq
941 aa
AA seq
DB search
MGQIGEAKVSCSNVLTFHRELLVSRLRSVQCILDNLLACGFLCEEDVEIVQRTATKADQV
RKILELVQCKGEEACEYLIFVIYTICDAYVDLQPWLRDIGYSPNSEVAVMKVVNTDPISR
YCEKMRHEMSRDTSFIMSYGQQEETRLEDLYTDTVMELLNDSNESLGILESLDQLLAENA
VFNPQGELVYVMGDAGVGKSILLQKLQNLWSKKELHTDAIFFFKFRCRMFSNFKDAEKIS
LRDLLFKYNCYPDHDPDNEVFEYILRFPEKVIFTFDGYDEIQEDADLMTVPEVASPEDKS
NPLQLLISLLCGKLLKGSQKVLTSRTGTEIQTKVIRKKVVLRGFSPTHLKTYIDLHFKEQ
EHRDLVSVQLDASPHLCGLCSTPLFCWIVFKSFRHLHTMHDSFHLPETCITLTDIFLLLS
EVFLSRSASPAPSLLKKRSRCTSDTFKSGLRPLAAFAKLALQGLERGSFICDQEDISACG
LTEEDLLLGFLRPVSEYDASGSPATFEYLHITLQSFLAAFALVLDEEAAAGSILKFFAEC
SRRRETTCLPLDFCINRSAKPREKKLFGTNEHLQFTNLFLCGLMSKSHMGLMGHLVSPAL
LKKKRTLLKSYLSTSVKSHLHGLPHYKGDEGKKVHVLPNFLWMLRCIFETGSKDIAQMTA
KGITAGFIKLGHCNVYSGDCTALNFVLQHRQKLLGLDMDNNNISDYGVKQLRPSFCKMTV
VRLCVNHLSDSSIEVLAEELCKHKVVEVLGLYSNHITDVGAKLVAHIIEECPKLRVLKIG
KNNITSIGGKYLADAIKKSTSIFDVGMWGNSIGDEGAEAFAEALRNHPRLTNLSLSANGI
TSRGGRHLAEALKENSVLRIFWLVQNELTDDVAPHLAEFVRANTGLTHLWLISNRFTVDG
IRPLAEALTHNTELKEICLKGNQVSEEEQKQFLQEKRLRFH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggggcagataggagaagccaaagtgtcgtgcagcaacgtcctcaccttccaccgagag
ctgctggtgtccaggctgaggagcgtccagtgcatcctggacaacctgctggcttgtggc
tttctctgcgaagaagatgttgagattgttcagcgaaccgcaaccaaggcagaccaggtg
cgtaaaatcctggagctggtccagtgtaaaggggaggaggcctgcgaatacttgatattc
gtaatatatacaatatgtgatgcctacgtggacctccagccgtggctgagggacatcgga
tacagcccaaacagtgaagtagcagtgatgaaagtggtgaacacggatcccatcagcagg
tactgcgaaaagatgagacacgaaatgagccgggacaccagcttcatcatgtcatacggc
cagcaggaggagactcggctggaggatctctacaccgacactgtgatggaactgttgaac
gacagcaatgaaagtctgggcatcttggaaagtctggaccagctccttgcggagaacgcg
gtttttaatccccaaggcgaactcgtctacgtgatgggggacgccggtgtagggaaatcc
atcctcctgcagaaacttcagaacctctggtccaagaaggagctgcacacggatgcgatc
ttcttctttaaatttcgctgcaggatgttcagcaactttaaggatgcggaaaagatctcc
ctcagagaccttttgttcaaatacaactgctacccagatcacgacccagataacgaggtc
tttgagtacatcctgcgcttcccggagaaggttatttttacttttgatggctacgatgag
attcaggaggatgcagacctgatgactgtacctgaagtggcgtcaccagaggacaagtct
aacccactgcagctgcttattagcttgctctgtgggaaactcctcaagggatcccagaag
gtgctgacatcccgaacggggactgagatccagactaaggtcataagaaagaaagtggtt
ctgcgtgggttctccccaacccacctaaagacgtacatcgatctgcactttaaggagcag
gagcaccgcgatctggtgtcagtccagcttgatgccagcccccacctctgtggcctgtgc
tccacgccgctgttctgctggatcgtattcaagagctttaggcatctgcacacgatgcac
gatagttttcacctgcccgaaacctgcatcacactcacggacatcttcctcctgctctcc
gaggtgtttctcagccgctcggcctcgcctgcgccatctttgctgaagaaacgttcccgc
tgcacctcggacacgttcaaatctggactcaggcccctcgctgcgtttgccaagctggcg
cttcagggcctggagagaggtagcttcatttgcgaccaagaggacatcagtgcgtgcggt
ctcacggaggaggacctactgctgggctttctcagacctgtcagcgagtacgatgccagt
ggaagccctgctacctttgaatacctccacatcacactccagtctttcttggcagcgttt
gctcttgtgctcgatgaggaggcggctgctggctccatcctgaagttcttcgccgagtgc
agcaggagaagggaaacaacctgcctgcctttagatttttgcataaatcgctccgcaaag
cccagagaaaagaagctatttgggaccaatgagcacctccagttcacaaacttgttcctg
tgtgggctgatgtccaagtctcacatgggcctgatgggtcacctggtgtctcctgctttg
ttgaagaaaaaacgtaccttgcttaagtcttacctgtctactagtgtcaagtcccacctc
cacgggttaccccactacaaaggagacgagggcaagaaggttcacgtcttgcccaacttc
ttgtggatgctgaggtgcatctttgagaccgggagcaaagacatcgctcagatgacagca
aaaggcatcacagccggcttcatcaagctgggtcactgcaacgtctactcgggcgactgc
acggccctgaacttcgtactgcagcaccgtcagaaactcctagggctcgacatggataac
aacaacatcagtgactacggggtcaagcagctcaggccctccttctgcaagatgacagta
gtgagattgtgtgtcaatcacctgtcagacagcagcattgaggttcttgctgaggagctg
tgtaaacacaaagttgtggaggttctggggctttacagtaatcacatcacagatgttgga
gccaagctggttgctcatatcattgaggaatgcccgaagctgcgagttctcaagattggg
aaaaataatatcactagcatcggtgggaagtatctggccgacgcgattaagaagagcact
tcaatatttgatgtggggatgtggggcaacagcatcggtgacgagggagcggaggctttt
gcggaagctttgaggaaccacccgaggcttaccaacctcagcttgtcagccaatggcatc
acatcaagaggcgggaggcacctggcggaagcactgaaagagaacagcgtcctcaggata
ttctggctggtgcagaacgagctgacggacgacgtggctcctcacttagcagagttcgtc
cgagcaaacaccggtttgacacatctctggttaatcagcaacaggttcacggtggatggg
atcagacccctcgctgaggctctcactcacaacacggagctcaaagagatttgcctcaaa
ggaaaccaagtgtctgaggaggaacagaaacagtttctgcaagagaaacgtctgcggttc
cactga
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