Mugil cephalus (flathead mullet): 125016722
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Entry
125016722 CDS
T08342
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcep00535
]
125016722 (col14a1a)
Proteoglycans [BR:
mcep00535
]
Extracellular matrix (ECM) proteoglycans
Others
125016722 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
125016722
NCBI-ProteinID:
XP_047455333
LinkDB
All DBs
Position
11:13450524..13576395
Genome browser
AA seq
1884 aa
AA seq
DB search
MLSEGKIRWCLWAPLVLLFLISWYPTNAQGQVPAPRRLRFKALSPRKLLVSWKEPKGEFD
SYLFLYNSIPGGQQREIIVSKSDTRVLITDYNPSKDYVFSVIAVSGSEQSRPLQGRYKAG
ESGEGDGRDKTEPQRLTDSVAPPEDANEISGADQFVCHTEAIADIVILVDGSWSIGRLNF
RLVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFYTKEAVIDAVKNLPYKGGN
TLTGLALTYILENCFKPEAGSRDGIPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGV
KNADESELRSIASDPDYSHVYNVADFNIMSSIVEGLTKTVCEQVEQQDKDIKQKHVPETI
GVPLNLVTSDVTARSFRVSWSRAAGNVEKYRVVYYPAQGGEPQEAVVDGGETSVVLQHLS
SLTEYQLAVFAVYASEASEALRGSETTLALPAVTGLQLFDVTHSSMKARWESVDGVSGYM
LLYAPLSDEGDLDEKEVKVSDAVTELELDGLTPHTEYTVSVYGMFGEEASDPVTNQETTL
PLSPPSNLQFSDITHNSAHISWEPAPGAVKGYRIMWVKSDGLVTEEVDVGPVSSYDLKEL
TSLMEYSVAISALYDEGRSEPLNDGFTTTPVPGPLNLRSADVGTDSFMVSWDHSASDIVL
YRLSWAPLTGGDTKEVVLIGSDNSYILAGLSPSTEYEVMLTAVFKDESESDTVSVLETTL
AMTTTITTTTTVAREAVRNLQLSDETTQSLEASWELDDPNVESYRVTYAGLSGEHNEESV
LVPGGQRRAVLEPLLSDTQYKVTVTPVYRDGQDGIGVSALGSTLPLLSPENVRVSEEWYN
SFRVTWDPPQSPTVGYNVVYQPVYDKGPVLETTVSDDLNTVFLFNLQSGTEYSVQVTASY
PAGQSEPLLVNAKTLFLGVSGLSTYQVRPSSMCVQWQPLLRATSYRVSIQSTLNGQRQEV
TLGGGASRQCFYDLTPSSQYQISIYTQIQEIEGPSVSITDMTLPAPTQPPTEPPTTEPPP
TIPPAKEVCKEAKADLVFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIAQF
SDDARTEFQLSSHSNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIFTPEAGARRGVPKV
LVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDA
VKKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFN
SFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILGKDNEPLV
GLILDNSGKTLTFFNYDYKGDFQTVNFEGAKIKKIFHGSFHKLHVTISKTSVKVVLDCSV
VGEKPISAAGNITTDGVEILGRMVRSRGRQDKSAPFQLQMFDIICSTSWASRDKCCELPA
LRVEEQCPPLPHACTCSQDSKGPPGPTGPPGGPGIRGARGDRGEPGVTGPQGPTGEVGPS
GPPGPPGPQGPSGLSIQGPPGAAGEKGERGEIGPAGSMGIHGGPGSPGRDGPPGARGLPG
NIGPQGRQGPPGPVGAPGAPGAPGSGGPAGPQGDQGLPGSAGTKGDKGERGDVQSQAAVR
AIARQVCEQLIQSHLSRYNSILNQIPVQSVQSVRTVPGPPGEPGRRGLPGPQGEQGPPGR
PGFPGTNGQNGRPGERGLPGEKGERGSQGVGTQGPRGPPGGPGLPGEGRTGSQGPPGRPG
NPGTAGRQGNPGSTGPPGPPGYCDQNSCMGYNVGVQPLPHGGYQSYSPPYNQQYNPAAVA
YNNDQGRGGDEDEDEDEEEEEEQDPYYRGYPPQYYPQQPAQLAHARHGYRSSPTHSEDVE
LRSPGVARRFQRDVVTEESEEGGL
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagaggggaagatcagatggtgtttgtgggctccactggtgttgctgttcctc
atatcctggtatcccactaatgcacagggtcaagttccagctccgaggaggctgcgcttc
aaagcactgagcccaagaaaactcctagtttcatggaaggagcccaaaggagagtttgac
agctatctgtttctctacaacagtataccagggggtcagcagagggagatcatagtatct
aaatctgacaccagggtgttgataacagactacaatccttctaaagactacgttttcagt
gtcatcgccgtcagcggcagcgagcagagcagaccacttcagggcagatataaagcgggt
gaaagcggtgaaggtgacggacgagacaagaccgagcctcagaggctgactgattcggtt
gcacctcccgaggacgccaatgagatctccggagctgatcagtttgtgtgccacaccgag
gccatcgcagatattgtgatcctggtggacggctcctggagcatcggccggctcaacttc
aggctggtccgtatgtttttggagaatctggtcaacgccttcgacgtcggcatcgacaag
acgagaataggtttggctcagtatagcggtgatcccaggatagaatggcatctaaatgct
ttctacactaaagaagcagtcattgatgctgtcaagaacctgccgtacaaaggaggaaac
acgctcacaggccttgcattgacttatatcttggagaattgcttcaagccagaagctggc
tcacgggacggaataccgaaaatcgggatcctcatcacagacggaaaatcccaggatgat
gttataccaccggcagagagcctacgaaacgctggcgtcgagttgtttgccattggtgtg
aagaacgctgacgagtccgagttgcgctccatcgcctctgacccggactacagtcacgtc
tacaacgtggcggacttcaacatcatgagctccatcgtagagggtctaaccaaaaccgtg
tgtgagcaagtggagcagcaagacaaagacatcaagcagaaacatgttccagagacgata
ggagtgccactcaacctggtcacttcagatgtcacggcccgaagctttcgggtctcatgg
agccgcgccgctggaaacgtggagaagtacagagtggtttattatcctgcccaaggagga
gaaccacaggaggctgtggtggacggcggcgagacttctgtggtgttgcagcatctcagc
tctctcaccgagtaccagctggccgtgtttgctgtgtacgcaagtgaggcaagcgaagct
ctgagaggatccgaaacaaccctggctcttcctgcagtgaccggcctccagctgtttgat
gtgactcacagcagcatgaaagcgagatgggagagtgtggacggagtctctggctacatg
ctactgtacgcgcctctttctgatgaaggagacttggatgagaaggaggtcaaagtatca
gatgcagttacagagctggagctggatggattgactcctcacactgaatacactgtcagc
gtttatggcatgtttggagaagaagccagcgatcctgttacaaaccaggaaaccacactg
ccgctgagtcctcccagcaacctccagttctctgacatcactcacaactccgcccacatc
agctgggagcccgcgcccggcgcagtcaaaggttatcgcataatgtgggtcaagtcagac
ggactcgtcacggaggaggtggatgtgggtccagtgagttcttatgacctcaaggagctg
acgtctctgatggagtactcggtggccatctccgccctgtacgacgagggccggtcagag
ccgctcaacgacggcttcaccaccactcccgttcccggtcctctgaatctgcgctccgct
gatgtcggcacagacagctttatggtcagctgggatcactcagccagcgacattgtcctc
tacagactctcctgggccccgctcacaggtggagacacaaaggaggtggtcttgattgga
agcgataacagctacatcctggccggcctcagtccctctactgagtatgaggtcatgctg
acggccgtgttcaaagatgaatctgaaagcgacaccgtctctgtcctagaaactacattg
gctatgacaacaacgatcactaccacgaccacggtggcacgtgaggctgtgagaaacctt
cagctgagtgacgagaccacccagagcttggaggcttcgtgggagctggacgaccctaac
gtggagagctacagggtcacctacgccggactcagcggtgaacacaatgaggagtctgtg
ttagttcctggtggtcagaggagagcggtgctcgagcctttgctatcagacactcagtac
aaagtgacggtcacaccagtgtacagagatggacaagacggcattggtgtctctgccttg
ggttccacattgcccctcttgtctcctgaaaacgtgcgtgtctccgaggagtggtacaac
agcttcagggtcacctgggatccgcctcagtctcctacagtcggctacaatgtcgtctac
cagcccgtctacgataaaggtccagttttggagacgacagtgagtgacgacttgaacacg
gtgttccttttcaatctacaaagcgggaccgagtacagcgtccaagtgacggcttcctat
cccgcaggacagagcgaaccgctgctggtgaacgctaagacgttgttcctcggtgtttct
ggcctgtcgacgtaccaggtgcgtcccagcagcatgtgtgtccagtggcagcctcttcta
cgagccacgtcgtacagagtctctatacagtcaacactcaatggtcagaggcaggaagtg
actctgggaggcggagcttccagacagtgcttctatgacctcactcccagcagccaatac
cagatcagcatctacacgcaaatccaagaaatagagggaccctctgtctccatcaccgac
atgacactgccggcgcccactcagcctcccactgaaccacccacgacggagcctcctccc
acaatcccaccggctaaagaagtatgtaaggaggccaaggccgacctggtgttcctggtg
gacggctcctggtccatcggagacgacaacttcatgaagatcacgcgttttctctacagc
accatggggtcgctggatctgatcggaccagatggcacccaggtggccattgctcaattc
agcgacgacgctcggacagaattccagctgagttcccatagcaacaaggaagcgctgctg
gaagctattcagaggatccgatacaaaggaggaaacaccaagacaggtcgagccatcaaa
catgtgaaggagtcgatctttaccccagaagctggggccaggagaggcgttcctaaagtc
ctggttgttctgacggatggacgttctcaagatgatgtcaacaaagtgtccaaagagatg
cagatggagggctatatcatctttgccatcggatttgcggacgcagactatggcgagctg
gtgaatattgccagcaaacccagcgacagacatgtctttttcgttgatgatttggatgct
gtgaagaaaatagaagaacagctcattacctttgtctgtgaggccgccactgccacatgt
ccgtccgttttgatgagtggtaacacaatggcaggtttccgtatgatggagaagtttggc
ctcgttgagaaggagtacagcaccatacctggcgtgtctctggagcctggttcgttcaac
agcttcccgtgttacaggttacaccgcgacgccctggtgtcacagcccaccaagtacctt
caccctgaaggtctgccctccgactacacaatttctatgatgctccgccttcttcccgag
accccccaggagccctttgcattgtgggaaatcctcggcaaggacaatgagccactggtg
ggactaatcctcgacaactctgggaaaactctgacgttcttcaactacgactacaaagga
gacttccagaccgttaactttgaaggagcaaaaataaagaaaatcttccatggaagcttt
cacaagctccatgtaactatcagcaagacgtcagtgaaggtggtattggattgttctgtg
gtcggggagaaacccatcagcgccgccggtaacatcaccaccgatggagtggagatcctc
ggaaggatggttcgctcccgaggccgacaagacaaatcggctccgttccagctccagatg
tttgacatcatctgcagcacatcgtgggccagcagagataagtgctgcgagctgccagca
ttgagagttgaagagcagtgtcctcccctgcctcacgcctgtacttgctcccaggacagt
aaaggacctccaggacccactggaccccctggcggtccgggcatacggggagccagagga
gaccgaggagagccaggagtgacgggacctcaagggccaacaggagaagtgggcccctct
ggaccaccgggaccacctggtcctcagggacccagtggactctccattcagggacccccg
ggtgctgctggagagaagggagaaagaggagagattggacctgccggatcaatgggtatt
catggaggtcctggatcacctggtagagatggccccccaggagcgaggggtctgccaggt
aatattggaccacagggacgacagggacctcctggacctgttggcgcccctggagcacca
ggagctccaggatcgggcgggccagcggggcctcaaggagaccaagggcttccaggttct
gctggtaccaaaggcgataagggagaaagaggtgatgttcagtctcaggctgctgtgaga
gctattgcccggcaagtgtgcgagcagctcatccagagtcacctgtctcgctataactcc
atcctcaaccagatccccgtccagtctgtccagtctgtccgaacggtgcccgggccacct
ggagagccgggtaggagaggccttcctggtcctcagggagagcaaggtccacctggaagg
ccaggtttccccggtacaaacggccagaacggccggccgggtgagagaggtctgccagga
gagaagggagaaagggggagtcaaggtgttgggactcaggggcctcgaggaccacccgga
ggtccaggtttgccaggtgaaggacggacaggcagccagggcccacccggtcggcccggt
aacccggggactgcagggaggcaggggaatccgggcagcacaggaccacctggtccacca
ggatactgtgaccagaactcctgtatgggatacaacgtcggagtccaacccctgcctcac
ggcggctaccagtcctacagtcctccctacaaccagcagtacaaccctgctgcggtggcc
tacaacaacgaccaagggcggggcggcgacgaggacgaggacgaggacgaggaggaagaa
gaagagcaggatccatattaccgtggttacccccctcagtactacccacaacagcccgcg
cagttggctcacgctcgccacggttaccgctcgagccccacccactccgaggacgtggag
ctgcggtcgccgggggtcgccaggaggtttcagcgggacgtcgtcacggaggagagcgag
gagggtggactttag
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