KEGG   Mugil cephalus (flathead mullet): 125016874
Entry
125016874         CDS       T08342                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125016874 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcep03400]
    125016874 (xrcc1)
DNA repair and recombination proteins [BR:mcep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125016874 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 125016874
NCBI-ProteinID: XP_047455582
LinkDB
Position
11:complement(3549870..3569956)
AA seq 624 aa
MPEIKLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTV
QEKWDRVKIVCSQPYSKNIAYGLSFVKFHSPPDKNDPPPTSSPKLTKLGQFRVKDESPSS
GPSLQPGSLFFNRDSSTKLSSSLKVSPQSDKLSYAAATLQAGSSSHASGQASSSNSASPQ
PPAKRKFEFSKERQSAPGAPPSKKTSPAGSPEGKAVTPKHKPTPVSTPSPSSAKAPSAQK
STERKGQPKPEPKTKPKAKSQREQQVPFNRIMEGVVFVLSGFQNPFRGELREKALDMGAK
YRPDWTPDSTHLICAFANTPKYSQVKSAGGMIVRKEWVMDCHKRKQKISYKRYLMDGAES
SSESEMEVDDQSEEEMDTKIPQKQERQVTPKKAQIKKEDDDEYGGSTDMDEPGGGDDDEE
SAVDTEDELQRVEKETRQKKTATSVKEEDPYGGSTDENTDAEAEEDHPIPELPDFFSGKR
FFLYGKFPNNERRLLLRYIVAFNGVIEEYMTDKVQFVVTSEGWHDSFEDALMENGNLNFV
KPAWIYAINERQKMLPYQPYTVVP
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgccagaaatcaagctgaaacacgtcgtgtcctgcagcaccgaggacactactcacaag
gcggacaacctgctcagttctgacacctacagaaagtggaaagcagcaagacccggggag
aaacagacatcagtcattcttcagtttgagaaagaagagcaggtgcacagtattgatatt
ggaaatgaagggtcagctttcatcgaagtgttggtggggaactcttcagctgtcagagac
caggactatgaggttcttctggttacatcctccttcatgtcccccacggagagccgtaat
ggcaccaacatgaaccgggtgcgtttctttggccccaaccagctgcagaagagcacagtt
caggagaagtgggacagagtgaaaattgtgtgtagccagccgtacagtaagaatattgca
tatggactttcctttgttaagttccattcaccacctgacaaaaacgatcctccaccaacc
tcctctccaaaactgacaaagctgggacagttcagggtgaaggatgagtctccttcatct
gggcccagccttcaaccaggaagcctgttcttcaatcgtgacagctcaacaaagcttagt
agttcactcaaagtgtctcctcagagtgacaagttgagctacgctgcagctaccctacaa
gcgggaagcagctcccacgcatcaggtcaagcttcctcttccaattctgcttcaccacag
ccaccagcaaaaagaaaatttgagttcagcaaagagcggcagtctgcgcccggcgctccg
ccctcaaagaaaacaagcccagccggatcaccagagggcaaagctgtgacccccaaacac
aagccgaccccagtgagcacacccagccccagctccgccaaagcaccatcagcacaaaaa
tctacagagaggaagggtcagcctaaacctgaacctaaaaccaaaccgaaggcaaagtcc
cagagagagcagcaggtcccatttaaccggatcatggagggggtggtgtttgtactcagc
ggcttccaaaacccctttagaggggagctgagagaaaaggctctggacatgggggccaag
tatcggcccgactggacgcccgactccacacatctcatctgtgccttcgctaacacccca
aagtacagccaggtgaaatccgcaggtggcatgatcgtacgaaaggaatgggtgatggac
tgccacaagagaaaacagaagatttcctataaacggtatttgatggatggagcagagtcg
agctcagagagcgaaatggaagtggacgaccagagtgaagaggaaatggacacaaagatt
ccacagaagcaggagagacaggtcactcctaaaaaggcacaaataaagaaagaggacgat
gatgagtatggtggctccactgatatggatgaaccaggtggtggtgatgatgatgaagaa
tctgcagtggacactgaggatgagctgcagagggtggaaaaggagaccaggcaaaagaaa
acggcgacgtcggtgaaagaggaggatccgtacggggggtcgacagacgaaaacacagac
gctgaagctgaagaggatcatcccatccccgagctacctgactttttcagcggaaaacgc
tttttcctttacggtaaattccccaacaacgagaggcgactgctgttgcggtacatcgtt
gctttcaatggagtaattgaggagtacatgacggacaaggtgcagttcgtggtgaccagt
gagggatggcatgactcgtttgaagacgcgctgatggagaacggaaatctgaactttgtc
aaacctgcatggatttacgcaatcaatgaacgtcagaagatgctgccctatcagccctac
actgttgtcccctga

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