Mugil cephalus (flathead mullet): 125016969
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Entry
125016969 CDS
T08342
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125016969 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125016969 (rad54b)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125016969 (rad54b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
125016969
NCBI-ProteinID:
XP_047455730
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All DBs
Position
11:9841490..9852671
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AA seq
939 aa
AA seq
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MRRSGAPSQLLGNAVKKPRFVPPGASTSFPVAESKPLASKPGMVNALHKVQRSLAAPAVS
KAPCSDQSSAAPALSRALARVLGATESKENEAAAKCQSGDCAEDEKTTGEEDGPQTTPWS
PQTPRPPAGSACDSGGSQDGARYFSVVWCKASKKKHKRWEGDAVLITRGRTVTLKDMEGK
DIGKGSGYKVSELASLSEGETLMIGGKQVEVMGIISSEDFASGRCFQEVQTEQNELHVKS
APPPCRPPASKPFCPPTMLGRAEPRVTRRDDEQTCRPRHDPLAPGALVMPRPSPNHQWIN
NKSGLPVVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRAAGRYGAILADEMGLGKTLQS
VALSWTLLKQGPYGGRPVAKRVLVVTPGSLVQNWGAEFNKWLGCERISVFTVDQDHRIEQ
FVLSPLHSVLVISYEMLLRCLEQVQKVEFGLVICDEGHRLKNSSIKTSSALSSLSCTRRV
ILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCTEEERGLGEERA
VELSRLTGMFILRRTQEIINRYLPPRLDWTLFCRPAPLQLELYGHLLSHRVFRACLQGST
QAHTHLACITALKKLCNHPGLLHSTVKERTDNGSVESSIYEGLVDLFPESYHSGGLDSAD
SGKLLVLSDLLTTIRQLSPSDRVVVVSNYTQTLDLLQDLCVHMGFTFCRLDGQTPTGQRQ
RLVDGFNSPYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQK
KTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSASELRDLFSLADTPS
LTHDLLNCDCSMDGTVNAVAEQVEEPLSDRPCQLGRLGDRKGGAAAAAAAAAQKHLSMSE
LMQWRHFSGDTHTFSDPYLDRARKHITFAFQTTISHATP
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttcaggagctcccagtcagctcttgggaaatgcagtgaaaaagcctcgattt
gtgccacctggagcatctacatcctttccggtggctgaatccaagcctctggcctctaaa
ccaggcatggtcaatgcactccataaggtccagagaagtcttgcagccccagctgtcagt
aaagcaccatgcagtgaccagtccagtgctgctccagccttgtcccgggcactggctcgt
gttctaggtgcgacagagagtaaggaaaatgaggcagcggcaaaatgtcagtcaggagac
tgtgcagaggacgaaaaaacaacaggagaagaagacggccctcagacaaccccctggtct
cctcagacccctcggcctcctgcaggatcggcctgcgattctggcggcagtcaggacgga
gcgcgttacttcagcgtggtgtggtgtaaggccagtaagaagaaacataagcggtgggaa
ggtgatgcagtgctgattacaagaggacgcacagtcacgctgaaagacatggaggggaag
gatattggaaagggtagcggctacaaggtgtcggagctggcctcgctgtctgagggggag
actctgatgatcggggggaagcaggtggaggtgatggggatcatttcttctgaggacttt
gccagtggccgttgtttccaggaggtccaaactgaacaaaatgagctgcacgtgaagtct
gccccgcctccctgtcgccccccggcgtccaaacctttctgtcccccaacgatgctgggg
agggcggagcctcgagtaactcgacgagacgatgaacaaacctgcagacctcgacatgac
ccgctagctccaggtgcgctggtgatgccgcgcccctctcccaaccatcagtggatcaac
aacaagtcgggtcttcctgtggttgatgtcgtggtcgacccgtacctgaccacacacctg
cgaccccaccagagagacggcttgctcttcctctatgagtgtgtcatgggcatgcgagcg
gcaggacgctacggcgccatcctggccgatgaaatgggtctggggaagacgctccagagc
gtggccctgtcctggacgttgctcaagcagggaccgtacggtggaagaccggtagctaaa
cgtgtcctggtggtgacgcccggcagcctggtgcagaactggggagcagagtttaacaag
tggctgggctgtgaaagaatcagtgtttttaccgtggatcaggaccacaggatagagcag
ttcgtgttgtcccctcttcacagcgttcttgtgatcagctatgaaatgctgctgcgctgc
ctggagcaggtacagaaggtggagtttgggcttgtaatttgtgatgagggccacaggttg
aagaacagcagcatcaaaacctcttcagccctcagcagcctcagctgcactcgcagagtc
attctcacaggcacgccggtacagaatgacctgcaagagttctacgctatcatagagttt
gttaatccagggattctcgggtcgtcgactgcttacaggaaagtgtacgaggaaccaatc
ctacgttccaggcagccgtcctgcacggaggaggagagaggtttgggagaggagcgagct
gtcgaactctctcgcctaacgggcatgttcatcctgaggcggacgcaggagatcatcaac
cgctacctgcctcctcgcctcgactggacgctgttctgccggccggcgcctctgcagctc
gagctgtacgggcacctcctctcgcatcgagtgttcagagcctgccttcagggctccact
caagcccacacacacctggcctgcatcaccgcgctgaagaagctgtgcaaccaccccggc
ttgctccactccaccgtcaaggagagaacagacaacgggtcagtggagagttcaatatac
gagggcctcgtagatcttttcccagaatcttatcattcaggaggactcgactctgctgac
tctggaaaactgctggtcctttcagacctgctgacgaccattagacagctcagcccttca
gacagggtggtcgtggtgtcaaactacactcagacactcgacctgctccaggacctgtgt
gtacacatgggcttcaccttctgccggctagacggacaaacacccacaggccagagacag
cggctggttgacgggtttaacagcccctactctcagaacttcctgtttctgctgagctct
aaagccggcggagtgggacttaatttgatcggcgcttcccacctggtgttgtacgacatc
gactggaaccctgccaacgacatccaggccatggcacgagtatggagagacggacagaaa
aagacagtgcacatctaccgtcttctcactgcaggaaccattgaagagcgtatatttcag
agacaggtgtccaaacagggactttctgggacagtggttgacttgggaaaaggagcagag
cacacgagtttctccgccagtgagctgcgagatcttttcagcctagcggacacgccctct
ctgactcacgacctgctgaactgcgattgcagcatggacggcacagtcaacgccgtcgca
gagcaggtggaggagccgctctctgataggccgtgccaacttggtcgcctgggtgaccgt
aaggggggggcagcggcagcggcggcggcggcggcgcagaagcatctgagcatgtcggag
ctcatgcagtggagacatttctccggtgacacacacacattctcagacccttacctcgac
cgcgcacggaaacacatcaccttcgccttccagaccaccatctcccacgcaacgccgtga
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