Mugil cephalus (flathead mullet): 125016989
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Entry
125016989 CDS
T08342
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125016989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125016989
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125016989
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125016989
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125016989
Transfer RNA biogenesis [BR:
mcep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125016989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
125016989
NCBI-ProteinID:
XP_047455753
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All DBs
Position
11:15367622..15378202
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AA seq
813 aa
AA seq
DB search
MDPRTAWIQPEQKGPANSLWMHIWETSQGFGANSGVDNRFHHQRNFALQNANSADSRGDY
GRDAAPTPGVMFGKLPKRDSGGGGESRGSVRRKGSLSPSSSSLDSEAESSSPSGSSLQID
NLNVADEAGQFLHYGGEHELNENNLRQSPLRTVNHHCRSVQQSGGHTPTGMKSQQGNKHH
HHQSHSSGRRRQLNRSNTFHHGINPLLSYGCNGHYVDSSCSLWKTRRYSPGINGLHEEIV
DFFNFMSPRPEEEAMRRDVVNRIEGVIKDLWPTARVEIFGSFSTGLYLPTSDIDLVVFGK
WDHPPLQELEQALKKHNVAGPYPIKVLDKATVPIIKLTDHETEVKVDISFNVETAVKAAQ
FIKSYLKKYTVLPPLIFVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDTRRA
NINLGILLIEFFELYGRDFNYMKTGIRVKNGGAYLSKEEMLKAMGNGNRPSMLCIEDPIQ
PGNDVGRSSYGVLQVKQVFDFAYMVLSHGVSPLARAYPNKEYDSTLGRIIKVSPEVLAYR
DWTIKKWGAKQYAKLENHDVEACEQDLARLMLVEDQRDSSSPLSADSPSPSPVFLSSPQH
HSSSSSSACSLSSSSSGSDIESDSPQSSSTTLQFHPLTLASVHSMIQMATDPRAAHAAGF
IHTCQLQMPLPENLTIPTLSNCQFYHENPPSISVVHRHTSQAAQVSQHTNSTSPLPSPLH
QLHHRQVGGQQSHTYTMRSNSHGSFEADKFGFKHNQGGILQGQNHSKGNFSPQRRFPPQV
HTPAPGFRHQQQYNRNTWRRRRRETLPALNHSR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggaccgcttggatccagccggagcagaagggacctgccaattccctgtgg
atgcacatttgggaaacctctcagggattcggagcaaactccggcgtcgacaaccgcttt
caccaccaacgcaactttgcattgcagaatgccaactccgcggactcgcgcggcgactac
ggcagagatgcagcgcctacgccgggggttatgtttgggaagctaccgaagcgagacagc
ggcggaggcggagagagccggggaagcgtccggaggaagggctcgttgtcgccgtcctcc
tcctctctggactcggaggccgagagctcctcgccctccggctcctctctgcagattgac
aatttgaacgtggcagatgaggccgggcagtttttacactacggcggtgagcacgagttg
aacgagaacaatctccgacagtcgccccttcgcactgttaatcaccactgtcgcagcgtg
caacaatccggcggccacacccccaccgggatgaaaagccagcaggggaacaagcaccac
caccatcagtcacactccagcggccgcaggaggcagctgaaccgttccaacactttccac
cacggcatcaacccgctcctgtcctacgggtgcaatggacactacgtggactcgtcctgc
agcctgtggaaaaccaggcgctacagcccgggcattaatggtcttcacgaagagatagtg
gactttttcaacttcatgtcccccagaccggaagaggaggccatgaggagagacgtcgtg
aacaggatagaaggcgtcatcaaggacttgtggcctacagcaagggtggaaatatttggc
agcttcagcactggactttatcttccaacaagtgacattgacctggtggtgtttggaaag
tgggaccatcccccgctgcaggaactggagcaagccctgaaaaaacacaatgtggccggc
ccatatcccattaaagtcctcgacaaggctacagtgccaatcatcaagcttactgatcat
gaaacagaagtgaaagtggacatcagcttcaatgtggagactgctgtcaaagcagcacag
ttcatcaagagctaccttaagaagtacactgttcttccaccgctcatcttcgttctgaag
cagttcttgctgcagagggaccttaatgaagtcttcactggaggcatcagctcatatagc
ctcatactaatggccatcagcttcctgcagttacaccctcggatcgacacgcggcgcgcc
aacattaacctaggcatcctgcttatcgagttctttgagctgtatggtcgcgacttcaac
tacatgaagaccggcatccgggtgaagaatggaggagcctacctgtccaaggaggaaatg
ctgaaagccatggggaatggaaacaggccatccatgctctgtatagaagatccaatacag
ccagggaatgatgtgggcaggagttcatatggagtcctgcaagtcaagcaggtgtttgac
tttgcctacatggtgttgagccatggcgtgtctcctctggcacgtgcataccccaacaaa
gagtatgacagtactttaggaagaatcattaaagtcagccctgaagttctggcttacagg
gactggacaatcaagaagtggggagccaagcaatatgccaagctggaaaaccatgatgtt
gaggcctgtgaacaggaccttgcgaggctgatgctggttgaggatcagagagactcttcc
tcccccctcagtgctgactccccctctccttctccagtctttctctctagccctcagcac
cattcgtcatcgtcatcctccgcttgctcactctcctcgtcctcctctggaagtgacata
gagtcggattctcctcaaagcagcagcaccactctccagttccaccccctcaccctggcc
tcggtccactctatgatccagatggctactgatccgagggccgcacatgcagcaggcttt
atccacacatgtcagctccagatgcccctcccagagaacctaaccatccccactctgtct
aattgccagttctaccatgagaaccctccttccatcagtgttgtgcaccgtcacacgtca
caagcggcacaggtttcccagcacaccaactccacgagccccctccccagccccctccac
cagctccaccaccgtcaggtaggagggcagcagagtcacacttacaccatgaggtcaaat
tcccacggctcctttgaggcagacaaatttggcttcaagcacaaccaaggtggaatcctc
caaggccaaaaccactctaaaggtaacttcagcccccagcgcaggtttcctccccaggtt
cataccccagcaccgggtttcaggcaccagcagcagtacaaccgtaacacctggcgacgc
agaaggagagaaactcttcctgctctcaatcacagcagataa
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