Mugil cephalus (flathead mullet): 125017078
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Entry
125017078 CDS
T08342
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1A
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125017078 (prdm1a)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125017078 (prdm1a)
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
125017078
NCBI-ProteinID:
XP_047455887
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All DBs
Position
11:2107520..2121519
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AA seq
852 aa
AA seq
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MCGWDQSYTATSHSSAMLTSEGAHAMEQDNTHHSAKIASTATSTGSDGAETASDTDVDME
MDMEEADMTQWTETEFEEKCTYIVKDTAWEAGPDCDAMMTSATRAEASLPRNLAFKHLAG
SKEVVGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDEDFHHFVDGLDET
RSNWMRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSG
ELMMQKLKQSLLEVKQQQVSSEDRVAEASSLSPVAVTPTPAKREHSVLSILQGTNSTKRE
PSRPLPTRPRYANSPERPVYPRALYPTLRPHPPTHIAEDFLSQKPGQLGYSSTHSSGTQS
SATPSPSARSSPESTPQGSPSGPAPSSASFYHTGLGPYPGYSPPTASISSPYYPPGVPYS
RYLLPHHYPLPAGGVPSVGGIIPRMYPLFSSLLPPHVPLLPSDTASRRFLMPDPVHPSPI
SGHRDFLLPGPTSAFSVATSLRDKAGPHNPYPGHPHPHGPARAPSSGSPTAGTAPPSEQM
PTKPTSALLGNTSEHHSDEEAINLSKVKRGTGSAGYKALPYPLKKQNGKIKYECNVCSKT
FGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSST
SNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLR
LHLKGYCLAANTSSGSPSVSSHAVLEEVQRANEEIERFDVSEHAERLEQLQGGGEMEVML
EKQVLGMLWQDTDLKSSQFHSHHKSSTTELLSAGYSAYESPNETSVIKMRHSSPIPPIPP
KITVKQESEDHV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacgccatggagcaggacaacacacaccacagcgccaagattgcttccacc
gccaccagcacaggctcagacggagccgagacggcgtcagacactgatgtcgacatggaa
atggacatggaggaggcagacatgacacaatggacagagacggagttcgaggagaagtgc
acgtacattgtaaaagacacggcgtgggaggcggggccagactgtgacgccatgatgaca
tcagcaaccagagcagaggcctcactgcccagaaacctggccttcaaacacctggcaggc
agcaaagaggtggtcggcgtgtgcagcagagagtacatcccaaaaggaactcgcttcggg
cccctggtgggcgagatctacacagccgacagcgtccccaaagacgccaatcgcaagtac
ttctggaggatctatgtggatgaggattttcaccactttgttgacggcctggatgagact
cgctccaactggatgcggtacgtgaacccagcccactcagcagcggagcaaaacctggca
gcatgtcagaacggaatggagatttatttctacacggtgaagcccgtcccggctggtgct
gagctgcttgtctggtactgccacgactttgcccgacgcctgcactacccaccgtccggg
gagctgatgatgcagaaacttaagcagtcccttttggaagtcaagcagcagcaggtgagc
agtgaagaccgggtggccgaagcatccagtctgtcccctgtcgcagtgacacccacccca
gccaagagggaacacagtgttctttccattctccaaggcaccaatagcacaaagagggag
cccagccggccacttcccacccgcccacgctatgccaacagtcctgagcgccccgtgtac
ccccgtgccctctatccaactctcaggccccacccacccacccacattgctgaagacttc
cttagccaaaaacctggccagcttggttactcctcaactcattcttctggcacccagtct
tcagccacacctagcccatcagcgaggagcagcccagaaagcacccctcaggggagcccc
tctggtccagcaccatcttctgcttctttttaccatactggactgggtccttaccctggt
tactccccaccaactgcctccatctcctcaccatactaccctccaggggtcccctactca
cgttacctgctgccccatcactatcctctacctgctggtggtgtcccttccgtagggggg
atcattcctaggatgtacccactgtttagcagccttctgccccctcatgtgcccctccta
ccctctgacacagcttcaaggcgctttctgatgcctgaccctgtacacccctcacccatc
tctggccacagagacttcctccttccaggcccaacaagtgccttctcagtagctacttcc
ctgagagacaaagcagggcctcacaacccttaccctgggcacccacacccacacggacca
gctcgcgcaccatccagtggctcgccaacggcagggacagcgcctcccagtgagcagatg
cccaccaagcctacctcagccctgctgggcaacaccagtgaacatcactctgatgaagag
gcaatcaatctgtccaaggtgaagcgtggcacaggctcggcaggatacaaagcactgcca
taccctctgaagaagcagaatggcaaaatcaaatatgagtgcaatgtgtgcagcaagact
ttcggacagctgtctaatctgaaggttcaccttcgtgtccacagtggagagaggcccttt
aaatgtcaaacctgtaacaaaggcttcactcagctggctcacctgcagaaacactatcta
gtccacactggggagaagcctcatgaatgtcaggtttgccacaagcgattcagcagcacc
agcaacctgaaaactcacctgcgcctccactcaggggagaagccctatcattgcaaactc
tgcccagctaaattcacacagtttgtccacctgaagctgcacaagcgcctgcactcccgt
gagcgtccacataaatgcccacactgtcatcgtcactacatccacctgtgtagcctgcga
cttcacctgaagggctattgtctggcagcaaacaccagctctggcagtccatctgtctcc
agtcacgctgtactggaggaggtacagcgagccaatgaggagatcgagcgctttgacgtc
agtgagcatgccgaacgactggagcagctgcagggaggaggtgagatggaggtcatgttg
gagaagcaggtcttgggaatgctgtggcaggacactgaccttaagtcgtcccaattccat
tcccaccacaagagcagcaccactgagcttctgtctgcaggttacagtgcatacgagtcc
ccgaatgaaacgtcagtcatcaagatgcgccacagcagccccatcccaccaattcctccc
aaaattacagtcaagcaggagtcagaggaccatgtgtaa
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