Mugil cephalus (flathead mullet): 125017471
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Entry
125017471 CDS
T08342
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125017471 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125017471 (hspd1)
03110 Chaperones and folding catalysts [BR:
mcep03110
]
125017471 (hspd1)
03029 Mitochondrial biogenesis [BR:
mcep03029
]
125017471 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcep04147
]
125017471 (hspd1)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125017471 (hspd1)
Messenger RNA biogenesis [BR:
mcep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125017471 (hspd1)
Chaperones and folding catalysts [BR:
mcep03110
]
Heat shock proteins
HSP60 / Chaperonin
125017471 (hspd1)
Mitochondrial biogenesis [BR:
mcep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125017471 (hspd1)
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125017471 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
125017471 (hspd1)
Exosomal proteins of breast cancer cells
125017471 (hspd1)
Exosomal proteins of colorectal cancer cells
125017471 (hspd1)
Exosomal proteins of bladder cancer cells
125017471 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125017471
NCBI-ProteinID:
XP_047456667
LinkDB
All DBs
Position
12:complement(1150535..1157075)
Genome browser
AA seq
578 aa
AA seq
DB search
MFRLPAVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETIINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLTLEDIQAHDFGKVGEVQITKDDTLLLKG
GGSAAEIEKRAAEIAEQLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDTIKPANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGSAEVGYDAMQGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGMGGMGGMGGMGGMGGGMGF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttaccagcagtcatgaagcaggtgaggcccgtgtgccgggcactggcccct
catctcaccagggcctacgccaaagatgtgaagtttggggctgacgctcgggccctcatg
ctgcagggggtagatctgctggctgacgccgtggctgtcaccatgggcccaaagggtcga
accgtcatcattgagcagagctggggtagcccgaaagtcaccaaggacggcgtgacggtg
gcaaagagcatcgacctaaaagacaagtacaagaatattggtgctaagctggtccaggac
gtggccaacaatactaatgaggaggccggcgacggcaccaccactgccaccgtgctagcc
cgtgccatcgccaaggaaggcttcgacacaatcagtaaaggtgctaacccagtggagatc
cgtcgtggtgtcatgatggcggtggaaaccatcatcaacgagctgaagaagctctcaaag
cctgtcacgacccctgaggagatcgcacaggtcgctacgatctcggccaatggagacgtg
gagattggtaacatcatatccaatgccatgaagaaagtcggccgcaagggagtcatcact
gttaaggacgggaagaccctgaatgatgagctagagatcattgagggaatgaagtttgac
cgtggctacatctccccatatttcatcaacactgccaaaggtcagaagtgtgagttccag
gacgcctacctgctgctgagtgagaagaagatctccagcgtccaaagcatcgttcccgct
ctagaaattgccaaccagcaccgcaaacctctggtcatcgtagctgaagacgtggatgga
gaagctctgagcactttggttctcaacaggctgaaggttggtctgcaggtcgttgccgtt
aaagctcccggttttggtgacaacaggaagaatcagctgaaggacatggcgatcgccact
gggggcactgtttttggagacgaggcgctgggcctgaccctagaggacatccaggctcat
gactttgggaaggtcggcgaggttcagatcaccaaagacgacactctgctactgaagggt
ggtggcagcgcagccgagatcgagaaacgggcagcagagatcgctgagcagctagagagc
accaccagtgactacgagaaggagaaactcaacgagcgtcttgccaagctgtcggacggt
gtcgccgtcctcaagattggaggaactagtgacgtggaggtgaacgagaagaaggaccgt
gtgacggatgctctgaacgccacccgggctgctgtggaggagggcatcgtacctggagga
ggctgcgccctgctgcgctgcatcccctcgctggacaccatcaaacctgccaactctgac
cagaagatcggtgtggacatcatcaggcgggcactgcgtattccggccatgaccattgcc
aagaatgcaggggtggagggttctctggtggtggagaagatcctgcaggggtcggccgag
gttggttatgacgccatgcagggagagtacgtcaatatggtggagaaagggatcatcgac
cccaccaaggtggtgaggacggcgttgttggatgccgctggagttgcgtccctgctctct
acggctgaggcagtcgtcaccgagatacccaaggaggagaaggagatgccgggaggcatg
ggaggcatgggcggcatgggtggcatgggcgggatgggaggcggcatgggtttctaa
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