Mugil cephalus (flathead mullet): 125017485
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Entry
125017485 CDS
T08342
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125017485 (ddx18)
03009 Ribosome biogenesis [BR:
mcep03009
]
125017485 (ddx18)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125017485 (ddx18)
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125017485 (ddx18)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
90S particles
Helicases
125017485 (ddx18)
Pre-60S particles
125017485 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
125017485
NCBI-ProteinID:
XP_047456689
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All DBs
Position
12:3692298..3699292
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AA seq
651 aa
AA seq
DB search
MADLQMKLLRKKIQKRNEKNKERKLQKKSSTQDEDSVDLTAKLNGPEEEDCEEPVTSCKT
NVEPKKKQNKQLEGPKETPLKKKKKKRKLNDTAEPPAEKKSKTVKEADDEEEEEEELQEE
SDDSGEKADKPEEDGDGDEEEDLPELPSGLTGAFEDTSFASLAGLVSENTLRGVKEMGFE
HMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVVILSPT
RELAMQTYGVMKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQNTP
GFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQTRKVEDLARISLK
KEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKF
HYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQY
DPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWSKISD
IQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNLPMVALSFGFKVPPY
VDLNVHSSKGSKLQKRGGGGGFGYQKSKNVHKSKIFKHVNKGKGDKRQFSR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctacagatgaagcttctccgcaagaagattcagaaaagaaatgaaaagaac
aaagagcgaaaattacagaagaaatcttctacgcaggacgaggattctgtggacttgaca
gcaaagttaaacgggccggaagaggaagattgtgaggagccggtcacgtcttgtaagaca
aacgtagagcccaagaagaaacagaataagcagcttgagggaccaaaggaaactcctctg
aagaagaaaaagaagaagaggaagctcaatgacactgctgaaccaccagcagaaaagaag
agcaaaacagtgaaagaagcagatgatgaggaggaagaagaagaagaattacaggaggaa
tccgatgacagtggggaaaaggctgacaaaccagaggaagatggcgatggtgatgaagag
gaagatctacctgaattgccatctggtttaacaggggcgttcgaggacacatcatttgcc
tctctcgctggattggtgagtgaaaacacgctgagaggagtgaaagagatgggcttcgaa
cacatgactgaaatccagcataaaagtattcgccccctgctggagggaagggatgttctg
gctgctgctaaaacaggcagcggtaaaaccttggctttcctcatcccatctatagagctc
atctacaaactcaagttcatgcccagaaacggcactggtgtagtgatcctctctccaact
cgtgagttggcgatgcagacttacggtgtcatgaaggagctgatgacgcaccacgtgcac
acctatggtctgataatggggggtagcaaccgctcagccgaggcccaaaagctggccaac
ggtgtcaacatcctagtggcaacacccggtcgtctgctggaccacctgcagaatacccct
gggttcatgttcaagaacctgcagtgtctgattattgatgaggctgaccgcatcttagag
gtgggctttgaggaggaactgaagcagatcatcaaactgctgccaaaaaagagacagacg
atgttgttctcagccactcagaccagaaaggtggaggacttggctcgcatctccctgaag
aaagagcccctgtatgttggggtggatgacaacaaagacaatgccaccgtagatggcctg
gagcagggctatgtggtatgtccatcagagaagcgcttcctgctgctcttcacgttcctc
aagaagaaccgcaagaagaaactgatggtcttcttctcttcctgcatgtctgtcaaattc
cactatgagctcctcaactacattgacctgcctgtcatggccatccatggcaagcagaag
cagaccaaacgtaccaccaccttcttccagttctgcaacgctgactcaggcatcctgctg
tgtacagatgtggcagctcgaggcctggacatcccagaggttgactggatcgtccagtat
gaccctccagatgaccctaaggagtacatccacagggtgggcaggacagcccgaggcatc
aacggcagaggccacgccctcctgatcctccggccagaagaacttggcttcctgcgcttc
ctcaagcaggccaaggttccactgagtgagttcgagttttcctggagtaaaatctctgat
atccagtcgcagctggagaaactgatcgaaaagaactactacctgcacaagtcagcccaa
gaagcctacaagtcatacgtgagggcttacgactcccactcgctcaaacagatctacagc
gtcaacaccctcaacctccccatggtggcgctctcctttggcttcaaagttcctccatac
gttgatctcaacgtccacagcagtaaaggttcgaagctccagaagcgaggcggcggaggt
ggctttggataccagaagtccaagaatgtgcacaaatccaaaatcttcaagcacgtcaac
aaaggaaagggtgacaagaggcagttctcccgctga
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