Mugil cephalus (flathead mullet): 125017570 Help Entry 125017570         CDS       T08342                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism mcep  Mugil cephalus (flathead mullet) Pathway mcep04382   Cornified envelope formation mcep04510   Focal adhesion mcep04512   ECM-receptor interaction mcep04518   Integrin signaling mcep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mcep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125017570 (col4a1)    04518 Integrin signaling     125017570 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125017570 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125017570 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     125017570 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcep04147]     125017570 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:mcep00536]     125017570 (col4a1) Exosome [BR:mcep04147]  Exosomal proteins   Exosomal proteins of other cancer cells    125017570 (col4a1) Glycosaminoglycan binding proteins [BR:mcep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125017570 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  125017570 NCBI-ProteinID:  XP_047456856 LinkDB All DBs Position 12:complement(17366131..17401640) Genome browser AA seq 1639 aa AA seqDB search MMLPSGALLLLVVHLYSRIDLTEAEGCGSSCGKCDCSGVKGSKGERGFPGLQGNMGFPGM QGPEGPSGPMGAKGDQGAFGSPGLKGVRGPPGLPGVPGTPGLPGINGHDGPPGPPGIPGC NGTKGDRGRDGTSGFPGLQGPPGTPGIPGMKGEPGGVIGIVPVKGDKGYPGLPGQPGFPG QTGPMGPPGPRGYYGLKGDPGPPGPPGEKGDRLAFVSEKGEKGEPGYAGPPGPPGQSSGQ DGVPTTVYVPGPPGYKGEQGDKGDKGYCLPYQHGVKGEPGPPGSIGKPGKDGGYGPKGDK GFPGASGETGYPGEKGDRGPPGYGTGAPGPPGPRGFPGTEGEKGFPGPQGPPGPPGRYRE GPPGEKGQKGDVGQKGDMGLEGESLVGPPGQPGATGPPGPPGEPDGLCDIEKGAPGPPGL QGLQGEVGQKGDRGETCFECEAFGPPGLPGPQGPKGEPGPPGVAGGKGQKGLSGVPGRPG TPGTQGTPGLMGAPGAVGEPGDIFVAPGYKGDRGLPGQAGSPGRPGRDGLPGKDGIPGEP GIKGEPAKEGIKGERGLDGDPGFTGPPGERGPPGTPGFGRPGEPGEKGSQGGPGRPGVPG SPGAKGEPGKGVITPGPQGVPGPRGETGLPGYQGDRGPPGDQGVPGFPGERGEQGPPGIG FPGPAGPKGISGVPGAQGIPGEPGRPGQDGFTGKTGVPGQKGEPGRGLPGPKGSQGLPGN IGFQGAKGDIGLPGVPGREGQTGPPGPQGLQGEVGPPGLPGLAGRPGEPGKGSPGAPGPQ GPPGEPGPFGREGIKGEKGYPGLPGLDMPGPQGEKGTPGFPGPPGSKGQQGQPGLPGRDG PFGNEGQKGEMGVMGTPGVPGFPGSPGTPGSPGLRGDPGSTGPRGGAGDPGPKGERGEPG IQGPRGNMSDVDMEHMKGEKGDIGDRGDPGVTGQKGYQGLPGDPGMPGKDGDPGLPGQPG AKGDPGEPGETGSMGPPGQKGSGGEMGIPGPVGPKGTKGDIGTPGHPGFRGTDGEKGDSG QPGEPGIGFPGFPGEKGPTGQPGFPGTPGEKGQKGQEGMPGKPGFEGPKGDKGSSGFPGQ AGRPGAKGISGLPGSVGDPGLDGRPGEGGMQGPPGPRGDKGDAGVDGIPGPSGERGDPGL PGRGFPGPPGDLGSKGDKGSSGAPGFPGHPGVPGFKGDKGLPGQQGPHGEPGERGSPGIS LEGPKGETGQTGQTGEKGSPGLPGPGGLPGRDGLKGDKGDQGHQGFQGETGHKGDPGSPG LPGQPGLPGIDGKKGERGLQGVAGFPGARGSVGDIGFKGDVGDRGFPGEKGNQGPPGPSG PHTFIKGDIGFPGTQGPPGPQGPIGIPGQKGQQGVTGIPGPKGDEGVPGYNGQPGAKGQP GLPGPQGPRGYPGPPGPDGVPGQVGQPGPSSVEHGFLVTRHSQSVEVPYCPHGTTLIYDG YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMP MSMAPITGESIKPFISRCAVCEAPAMVIAVHSQTIMIPACPQGWDSLWIGYSFVMHTSAG AEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDNEMFTKPVPTTL KAGSLRTHISRCQVCMKRT NT seq 4920 nt NT seq  +upstreamnt  +downstreamnt atgatgttaccgtccggcgcgctgctgctgctggtggttcatctctactcaagaatcgat ttgacagaagctgagggttgtgggtcatcatgtggaaaatgcgactgcagtggtgtaaaa ggatcaaagggtgagcgtgggtttcctggtctccaaggtaacatgggattcccagggatg caaggacctgaggggccttcagggccaatgggcgccaagggagaccagggtgcgtttggg tctcctggactgaaaggagtgcgaggtccacctggtctgccaggtgttccgggaactcca ggactaccaggcatcaatggacatgatggtccacctggtccgcccggtatcccaggatgc aatgggactaaaggagacagaggaagggatggcacttctggttttcctgggcttcaaggg cctcctggcaccccgggaattcctggaatgaagggtgaaccaggtggcgtgattgggatt gttcccgtcaaaggagacaaaggataccctggcctacctggacaacctggattccctggc caaactggacctatgggacctccaggacctcgtggctattatggactcaaaggtgaccct ggcccccctggccccccaggagagaagggtgacaggttggcgtttgtgagtgagaaagga gaaaagggtgaacccggatacgccggcccacctggtcctcctggtcagtctagcggacag gatggagtacccaccacagtttacgtacctggcccaccggggtacaaaggagaacaagga gataagggagacaagggctactgcctcccttatcaacacggtgtaaaaggtgaacctggc ccacctggatcaataggtaaacctggtaaggatggaggttatggccctaagggagataaa ggctttccaggagcttctggagaaactggctatccgggagagaaaggagacagaggacca cctggttatggcaccggtgcacctggcccccctggccctcgtggttttccagggacagaa ggagaaaaaggttttcctggtcctcagggtccaccaggcccaccaggtcggtacagggaa gggcctcctggagagaaaggtcaaaaaggagatgtgggtcaaaaaggagacatgggactg gaaggagagtctcttgttggacctccaggacaaccaggagccactggaccccctggcccc cctggagaaccagatggtttatgtgacattgagaagggagcccctggcccacctggactt caaggcttacaaggggaagtggggcagaaaggtgacagaggagaaacctgtttcgagtgt gaggcttttggcccacctggattacctggccctcagggccctaaaggagaaccaggacct cctggtgtagctggtggcaaaggacaaaaaggtctttctggagtccctggacgacctgga acacccggtactcaagggactcccggattgatgggggcccctggggctgttggtgagcca ggggatatttttgtagctccgggttacaagggggacagaggtcttcctggtcaagctgga tccccagggcggccaggccgagatggactgcctgggaaagatggcattccaggcgaacct ggcatcaaaggagaacctgctaaagagggtatcaagggtgaacgtggacttgatggagac cctggttttactgggcctccaggagagcggggtccacctggtacaccaggtttcggccga ccaggagagcctggagagaagggcagtcagggtggtccaggacgtcctggagttcccgga tcacctggtgcaaaaggtgagccaggtaaaggtgtgatcactcctggacctcagggggta cctggaccacgaggagaaacaggcttacctggatatcaaggtgacaggggcccaccagga gaccagggggttccaggtttcccaggagaaagaggtgaacaaggacctcctggaattgga tttccgggtccagccggtcctaaaggaatcagtggagttccaggagcacagggaatacct ggagagccaggaagacctgggcaggatggattcactgggaaaactggtgtgcctggacaa aagggtgaacctggacggggtcttccaggtccaaagggctcacagggccttcctggaaat attggcttccagggagcaaagggtgacattggactacctggagttcctggacgagaagga cagactggaccaccaggacctcagggacttcaaggtgaggttggacccccaggacttcct ggattggctggcagaccaggtgagccaggaaaaggctcacctggcgctcctggaccacaa ggaccacctggagaacctggaccattcggtcgggaaggtataaagggagaaaagggttac ccaggtcttcctggtctggacatgccagggcctcaaggagaaaagggaacccctgggttc ccaggacccccaggttcaaaaggacaacaggggcaaccaggcttaccaggcagggatgga ccatttggaaacgaaggtcaaaagggggaaatgggggtaatgggaacaccaggagtgcct ggatttcctggatcgccaggcacacctggatcacctggtctgagaggtgatcctggtagt actggaccaagaggcggtgctggagaccctggacctaaaggtgaaagaggagagccaggt attcaaggaccgcgtgggaacatgagtgatgttgacatggagcacatgaagggggagaag ggagacattggagacagaggtgaccctggggtcactggacagaagggctaccaaggactc ccaggagatcctggaatgccaggcaaagatggagatcctggattacctggacaaccaggg gcaaaaggagatcctggagagcctggagagactggcagcatgggaccacctggacagaaa ggcagtgggggagagatggggataccaggtccagttggtccaaagggtaccaaaggtgat attggtacaccgggacatcctggattcagaggtacagatggagaaaagggagatagtgga caacctggtgagccaggtatcggcttcccaggattcccaggagaaaagggtccgactggc cagccaggatttccaggaacacctggagagaagggtcagaaaggtcaagagggtatgccc ggcaagccaggtttcgaaggacccaagggagacaaaggaagcagtggattcccaggtcag gcaggtagaccaggcgcgaagggtatctctgggcttcctgggtctgtaggagatcctggt cttgacggtcgacctggtgaaggtggcatgcaaggtcctcctggtcctcgtggagacaag ggcgatgctggggtggacggcattccgggaccctcaggggaaaggggagatccaggttta cctggtcgtggttttccgggcccacctggagatcttgggagcaaaggtgacaaaggaagt tctggcgcccctggcttccctggtcacccaggtgttcctggtttcaaaggagacaaggga cttccaggccaacaaggtccccatggtgagccaggagagcgaggttccccaggtatctct ctagagggtcctaagggagagacgggacaaacaggacaaactggagaaaaaggatcccca ggtttaccaggacctggtggtctgccaggcagagatggcctaaagggagacaaaggagat cagggtcaccagggcttccagggagagacgggacataagggagaccccggatctcctgga cttcctggccaacctggccttccaggtatcgatggaaagaagggagagagaggattgcag ggagttgctggcttcccaggtgcaagaggttctgttggggacattgggttcaaaggagac gttggagatcgaggattcccaggagaaaaaggtaatcaagggcccccaggtccctctggc ccccacacctttattaaaggagatattggtttcccgggaactcaaggcccgccaggacct cagggtccaattgggattcccgggcagaaaggacagcaaggtgtgacaggtattccaggg ccaaagggtgatgaaggtgtgcctggatataatggtcagcctggagctaaaggacagccc ggcctgcctgggccacaaggacccagaggataccctgggcccccaggacctgatggtgtt ccaggtcaagtgggtcaacctggcccctcgtctgtggagcatgggttcctggtgacacgt cacagccagtcggtggaggttccatactgtcctcatggaaccacgcttatatatgacggc tactccttgctctatgtacaaggcaatgaacgctctcatggacaagacttaggtacggca ggcagctgtctacggaagttcagccccatgcccttcctgttctgtaacatcaacaatgtg tgcaacttcgcctctcgtaatgattactcctattggctcacctcacctgagcccatgccc atgagcatggcacctatcaccggtgaaagcattaaacccttcatcagcaggtgtgctgtg tgtgaagccccagccatggtgatagcagttcacagtcagaccatcatgattccagcttgc cctcagggctgggactctctgtggataggctactctttcgtcatgcacaccagtgctggt gctgagggttcaggccaggctctggcctctcccggatcctgcctggaggaattccgcagt gctccattcattgagtgtcacggtcgaggaacctgcaactactacgccaactcctacagc ttctggcttgccaccatcgaagacaatgagatgtttacgaaacccgtcccgacaacacta aaagcaggcagcctccgaacacacataagtcgctgtcaagtgtgcatgaagaggacataa

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