KEGG   Mugil cephalus (flathead mullet): 125018039
Entry
125018039         CDS       T08342                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03410  Base excision repair
mcep04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125018039 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125018039 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcep03400]
    125018039 (parp4)
DNA repair and recombination proteins [BR:mcep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125018039 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA VWA_2 WGR-like_PARP4 BRCT_2 BRCT PARP_reg
Other DBs
NCBI-GeneID: 125018039
NCBI-ProteinID: XP_047457612
LinkDB
Position
12:26342201..26364243
AA seq 1815 aa
MTVMALFENCSLLLELKYLSYKEKKKVQLAVTENGGNIAFVVNKQCSLVVTSDVANLSSN
RLRSIHKHQIPVVGVDYVYCCVERGVRLPVDEYKLDTSSTSTLPPPPLSSPKKTPRPRQV
SVIHVVDETPQRNEAPQRSGNVLEKFRIYSETDSKLPSFPDRFHVAKYSIYEKRNSWWVL
ELQSSTGEKGRQYRVVRYWKEDAGAQKAAVRDMQVFLSSSEEALEVYQSLRDSLEASGLQ
KRSCVPPQAKNLGSAPLHQLLLEEKLNTGQLSEEVGVFVELLWTEALGCLNDILSVSIDK
LSINDVSRAEGLLLQAQKKLRDNDYEAVISLLGEFYTLLPHKRQNLHPEAKLISQKLDLC
QLIRDVVNVSEMTLRSPAPSCVGKYRALRCSIEPVPSNSSEFQAVRNLLQGSKVQIQQIV
RVSRGVELQTFKSELGNIKPLLHSSSPSNFVGILSRGLLLPRVGVEHHGIERTDVGNLGS
GIYFGDTMSTSLKYSKPSVTDGSRLLLVCDVALGRCRDVHQRDTTLTQAPEGHHSMHGVR
RTANAQSDFEDDEYVVYSTDQVRLKYVVQFSIEGDQRKDFSPDINTSAELCLPPSSQDFG
SEDNGVEHVKNPMEDVKAGLLNSSGQQLPLQAVHVKCKLMDLLSQVVIFQKYTNQSSEAI
EAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKEKARKEYKQAIEKGYGAYLMDQDAPDV
FTISVGNLPPGATVLIKITYVSELMVRDGSILFSLPGSVAPWQESAALNQTTQVTVEKVC
VTDKEAGRREFTLDASVEMPYEISSLQCVTHKVKMKRTDCKAVVSVLPGEVLGPDGFQLN
ITLSEVHLPRMWVENHPDKDSQACMLVFYPNFEVDSGSAADEVILLLDTSESMRGESLQE
AQRIALQVLKVLDNNVRLNVILFGTGHTDAFLTAKPLSEVHQAARSFIKRCSSVGGSTEL
WRPLRALSLLPPSRGVRNLLLLSDGHIQNAELTLQLLRDNSQHSRLFSCGLSPTANRHML
RALAQAGGGAYEFFDTKTKHNWAEKVARQLKRMASPGCSSVSVKWQQFNPSAPPPVQAPK
QLHALFSDCHTLVYGFVPHCTQATLVGNLSGQELKTMVSTSELQKTRGTFLHKLTARALI
RDYEDGSLDTSEAGHEGKKVELKSFIVQLSKEFSILSQFTSFVAIEERDSEQAEDGFTDI
PKLIAEEDVDFLSYMSFSHDDDTDSDFFKSALLKDLPIPRMARFPSSLSDDEWSLSSDDK
KNQALTSSSDDDEVEPLEFGDYDGECALMSADKQYGSFLPSLQTLEVLDLPSTPVIALGM
SPVIKRDRPPPPPPPLPHPVVLGFHSFPGSPPPPPPPRPPRPPYPGPPPPLATGDSRAVR
SCRAKSMVARAIEPVRKKGRRSSRPILPPPRGTVIPTSFGAIMSSTDALDLSQQLEICSR
PLSGRRSSPAPPAAAPEISEALPLFCRSSSLDGSFSEGAPLVPQQMLEAQGVPSFDAAAA
PPSTVETGSGFQFGALFGSSRSSAASSSRGAAPVHQIPEDVLSRVRVGGCRSLAARGRSL
AAPPAPVPLMLEAPIGYAAAPQPTLELGSGFQFGALFGSSSSSAASSNSGASPVLRRRPE
INFLKERMFLDRSSRSHERERQLCFRMSSAAPEPTPNPKWIKIFQMQHSEGYWELTEELG
ELININVDVFANVFLKNKGIRSLGVRAHADILRLVATLLVLQLMRLEMLEEGKLLSSLFR
LELSEPRPQRWLRVKTAVDWVSWADRQYPSIYSRLEFGQSWESATRQLLGYERLPHFSPL
SGLDLHRTTPLLLVH
NT seq 5448 nt   +upstreamnt  +downstreamnt
atgactgtcatggctctgttcgagaactgctctttgctgctggagctgaaatatttatcg
tacaaggagaagaagaaggttcagttggcggtgacagagaacgggggcaacattgccttt
gtggtcaataaacagtgctctctggtagtgaccagcgatgtggccaacctgagctccaac
aggctgcgcagcatccacaagcaccagatccctgtggtcggagtggattacgtgtactgc
tgtgtggagagaggagtccgtctgcctgtggacgaatacaaactggacacgtcctccact
tcaacgcttcctcctcctcctttgtcttcaccaaagaagactccacgtccacgtcaagtg
tctgtgatccatgtggtggatgagacgcctcagaggaacgaggctccgcagaggagtggg
aatgtcctggaaaagttcaggatctactctgaaactgattccaaacttccatcgtttcct
gatcgttttcacgtggccaagtattcgatctatgagaagagaaacagctggtgggtactg
gagctgcagagctccacaggagagaaaggacgtcagtatcgggtggtcaggtactggaag
gaggatgctggagcacagaaggcggcggtgagggacatgcaggtgtttctgtccagctca
gaggaagctctggaggtgtaccaatccctcagagactcgctggaggcttcaggcctgcag
aagaggagctgcgtccccccacaggccaagaacctgggctctgcccccctccaccagctt
ctgttggaggagaagctgaacacaggacagttatctgaggaggtgggcgtgtttgtggag
ctgctgtggaccgaagccctcggctgtcttaacgacatcctcagcgtttccatcgacaaa
ctcagcatcaatgatgtgagcagggccgagggcttgttgcttcaggctcagaagaagctg
agggacaacgattatgaggcggtgatttctctcctgggggagttttacacgctgctgcca
cacaaaagacaaaacttacatcccgaggccaaactcatctctcagaaactggatctgtgt
cagttaatcagagacgttgtgaacgtgagtgagatgactctgaggagcccggccccctcc
tgtgtggggaagtatcgcgcactgaggtgcagcattgagcctgttccctccaacagctcc
gagtttcaggccgtgagaaatctgctgcagggcagtaaagtgcagatccagcagattgtg
cgtgtcagcagaggagtggagcttcagacatttaagagcgagctcgggaacattaagcct
cttctacattcctccagccccagcaactttgtggggatcctgtctcgcggcctgctgctg
ccccgcgttggagtggagcatcatgggatagagagaacagacgttggcaatctgggcagt
ggaatctactttggtgacaccatgagcaccagtttgaaatattccaaacccagcgtgacg
gacggctctcggctgctgctggtgtgtgacgtggcactgggacggtgcagggacgtccac
cagagagacaccacactgacccaggctcctgagggacaccacagcatgcacggggtccgg
cgcaccgctaacgctcagtctgactttgaggatgatgagtatgtggtctacagcactgac
caggtgaggctgaagtacgtggttcagttcagcatcgagggagaccaacggaaggacttc
agtcccgacatcaacacatcggccgagctgtgtctgcccccgtccagccaagactttggt
tcggaggataatggtgtggaacatgttaaaaaccctatggaggatgtgaaggccggactg
ttgaacagctctggtcagcagctccctctgcaggccgtccacgtgaagtgcaaactgatg
gatctgctgtcccaggttgtcattttccagaaatacaccaatcagagctctgaagccatc
gaagcgaagtatgtgttccctctggatgattctgcagccgtgtgtggatttgaggctttc
atcaatgggaaacatgtggttggacaggtgaaggaaaaggagaaggctcgcaaggagtac
aaacaggctatagagaaaggctacggagcctacctcatggaccaggatgccccagacgtg
ttcaccatcagcgtgggcaaccttccgcccggtgccaccgtcctcatcaaaatcacctac
gtgtccgagctgatggtcagggacggcagtatcctcttctccctgccaggcagcgtggcc
ccgtggcaggagagcgccgcgctcaaccagaccactcaggtcactgtggagaaggtgtgt
gtgactgacaaggaagccggcagaagagagttcaccttggacgcgtcggtggagatgccc
tatgagatctccagcctgcagtgtgtcactcacaaagtcaagatgaagagaaccgactgt
aaggctgtggtcagtgtgctgccaggagaggtcctgggtccggacggtttccagctgaac
atcactctgtctgaagtccatctacccaggatgtgggtggaaaaccacccagacaaggac
agccaggcctgcatgttggttttctatccgaactttgaggtcgactccggctcagcagcc
gatgaagtcatcctgttgctggatacgtctgagtccatgagaggagagtctctccaggag
gcccagagaatcgccctgcaggtcctcaaagtcctcgacaacaacgtcagactcaacgtc
attttgtttggcacgggtcacacagatgctttcctgacagcaaagccactgtctgaagtt
catcaagctgctcggagcttcatcaagcgctgctcttcagtagggggcagcaccgagctg
tggcgccccctgcgagctctcagcctgctgcctccgtcccgcggcgtcaggaacctgctg
ctgctgtcggacggccacatccagaacgcagagctcaccttgcagctgctcagagacaac
tctcagcacagccgcctcttcagctgcggcctcagtccaacagccaaccggcacatgctc
agagccctggcacaagcagggggcggagcctatgaattcttcgacacaaaaaccaaacac
aactgggcggagaaggtggcccgtcagctgaagcgtatggcatctccgggttgcagctcg
gtgtctgtgaaatggcagcagttcaacccgtcagctcctcctcctgtgcaggcgcccaag
cagctgcatgctctgttcagtgactgccatacgctggtgtatggctttgtgccgcactgc
actcaggctacactcgttgggaacttgagtggtcaggagctcaaaaccatggtgtcgacg
tctgagctgcaaaaaacgagaggaacattcctccacaagctcacagcgagggcgctcatc
agggactacgaggacgggagcctggacaccagtgaagctggacacgagggtaagaaagtg
gagctgaagtccttcatcgtgcagttgagcaaagagttctcgatcctgtctcagttcacc
agcttcgtggccatcgaggaaagggattctgaacaagcagaggatggcttcacagacatc
cccaagttgatcgcagaggaggatgtggacttcctctcgtacatgagtttttctcatgat
gacgataccgacagtgattttttcaagtcagctttgctcaaagacctgcccataccgcgg
atggccaggttcccgtccagtctttctgatgacgagtggagcctttcttctgacgacaaa
aaaaatcaggcgctgaccagttcttctgatgacgatgaggtggaaccgttggaatttggt
gactacgatggggaatgcgctcttatgtcggctgacaaacaatacggatcctttttacct
tcactacaaactttagaagtattggaccttccatctacgcctgtaatagctctcggaatg
tcaccagtcatcaaaagggaccgacctcctcctcctcctcctcctcttcctcatcctgtt
gttcttggttttcattcttttcctggttctcctcctcctcctcctcctcctcgtcctcct
cgtcctccttatcctggtcctcctcctcctcttgctactggcgattctagagcagttcgt
tcatgtagagctaagtccatggtagcacgagccattgagccagtgaggaaaaaagggagg
aggtcctcccgccccatccttccaccaccacgaggaactgtaattcccacatcgtttggc
gccatcatgtcttccactgatgcacttgacctgagtcagcaacttgaaatttgtagtcgt
ccgcttagtggaagaaggtcttcacctgctccaccagcagcagcgcctgagatctctgag
gctctgcctctgttttgcagaagcagttctttagatggttctttcagcgagggagctcca
ctggtgcctcagcagatgcttgaggctcaaggggttccatctttcgatgctgcagctgct
cctccgtcaacagtagaaacgggatctggatttcaatttggggctctgtttggcagcagc
aggtcttcagctgcttcatccagcaggggagctgcaccagtgcatcagataccagaggat
gttctgtcgcgagtaagagtaggagggtgcaggtctttggctgccaggggcaggtctttg
gctgctccaccagcaccggtgcctctgatgctagaggcacctatcggttatgcagctgct
cctcagccaacattagaattgggatctggatttcaatttggggctctgtttggcagcagc
agttcttcagctgcttcatccaacagcggagcttcaccagtgcttcggaggagaccagaa
attaacttcttaaaagaacgcatgttcttggatcgatcttcacgaagtcatgaacgtgaa
cgtcaactttgtttcaggatgtcatcagcagctccagaaccaaccccaaatcccaaatgg
ataaagatcttccagatgcagcattcagagggctactgggagctgaccgaggaactgggt
gaacttattaacatcaatgtggacgtctttgccaacgtgttcctgaaaaacaaaggcatc
cggtctctaggggtgagggcacatgcagacatcctgaggctggtggcgactctcctggtt
ctgcagctgatgaggttggagatgctggaagaaggcaaactgctcagcagcctcttccgt
ctggagctctctgagcccaggcctcagaggtggctgagggtgaagacggccgtggactgg
gtctcctgggctgaccgtcagtacccctccatctacagtcggctggagttcggtcagagc
tgggagtccgccacccgccagctcctgggctacgaacgcctccctcacttctcccctctc
agcggcctggaccttcacaggaccacacccctgctgctggtccactaa

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