Mugil cephalus (flathead mullet): 125018126
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Entry
125018126 CDS
T08342
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcep03036
]
125018126 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcep04812
]
125018126 (clasp1a)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125018126 (clasp1a)
Cytoskeleton proteins [BR:
mcep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125018126 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Cnd1
Adaptin_N
Sec7-like_HUS
MMS19_C
ParcG
Dopey_N
HEAT_DAAF5
Paxt-1_C
TAN
Motif
Other DBs
NCBI-GeneID:
125018126
NCBI-ProteinID:
XP_047457752
LinkDB
All DBs
Position
12:3734788..3809205
Genome browser
AA seq
1647 aa
AA seq
DB search
MMEPSMENCLTQVLQKDVGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSAVVTRLQERFRAHIGTVLPSLIDRLGDAKDQVREQDQTLLLKIM
EQAATPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFGKFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVVSSVRRPSSATTTKPTAKEAAAGAVDEEDF
IKAFEDVPSVQFYSNKELEEQLSKIREVLSDDKHDWEHRVVALKKIRSLLLAGATEYEGF
PQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSSLLRNKFDHGAESIMPTLLNLVPNSA
KIMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPFTVKSVIGGSITRSKLVGSRVSTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFSSASALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGASA
SVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRTAASASTTPAD
KRSRIPRSQGCSRETSPSRLGLARLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSR
ESSRDTSPARGFTPLASRRHSRSTSALSTADPHGQSDRYGLIHQARISASVNAMRVLNTG
TEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPH
YLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPH
SKRVFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRES
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKTLHNWVSEELAGRSSTAALLSTEGNQEERCKQAAQVVLIALFELNTPE
FTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPPRHTPSRTSPLTSPT
NCSHGGLSPSRLWGWGVDGLSKQPAPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTE
NMNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRREGKRDDAAGREGVASSPGSDARLGL
DMVEGGRTALDNKTSLLNTPSPRSFSGPRTREFAPYGYGETICTYDKSALKEAVFDDDVE
QFRDCRRQESGENKMTLPKVFAPAIGQDHSDLVADLLKELSNHNERSEERKGALVELLKI
TREDSRAVWDEHFKTILLLLLETLGDKDHTIRAMALRVLKEILRNQPARFKNYAELTIMK
TLEAHKDCHKEVLRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIE
RIAKDSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKM
KLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccgagcatggagaactgcctgacccaggttctgcagaaggacgtgggccgg
cggctgcaggtggggcaggagatcatcgattacattttggacaaagagaagtctcatgat
ctggagcaagatcagacagcgctggacaagatggttgatggcattgccagctcctgggtc
aactctagcaacttcaaggtggctctgctcggcttggacctcttatctgctgtagtgacg
aggttacaggagaggtttagggcccatataggaacagttctacccagccttattgatcga
ttgggagatgccaaagaccaagtgcgagaacaagaccaaactttgctgctaaagatcatg
gaacaagcagccaccccgcagtatgtatgggacagaatgctgggaggcttcaaacataaa
aacaacaggaccagagaaggagtgtgcctttgtctcatcgccacactgaacacatatgga
gctcaaggcctgaccctgagcaaaatagttccccacatatgtaacctcctgggggacccc
acaagtcaggtacgtgacggggctatgagctgcttggtggagatctacagacacgtgggg
gagagggtgaggctggatctcagcaagaagggccttcctcagtcacggttgaatgtaatc
ttcggcaaattcgatgaagtccaaagatccgggaacatgatctcatcttctggctcagat
aagaactttgaggatgaggactctgtggatggaggccggtcctcctcctcctcgtcctcc
aaggctccccccagtggcaggaggaccgtagtgagctccgttagaagacccagctccgcc
accaccacaaagcccacagctaaagaggcagctgctggggctgtagatgaggaggatttc
atcaaagcctttgaagatgtgccctcagtccagttctactctaacaaagagctggaggag
cagctgtccaagataagagaggtgctgtctgacgacaaacatgactgggagcatcgagtg
gtagcgctgaagaagatccgttcactcctgttggcgggagctactgagtatgagggtttc
cctcagcagttgcgacttctggaggctcctctcaagctgtcagctaaagacctgcgctcc
caggtggttcgtgaggcctgcatcacattaggatatttgtcatcgctgctccgtaacaag
ttcgaccatggagcggagagtatcatgcccacgctgctgaacctcgtgcccaacagtgcc
aaaatcatggccacgtccgggatggctgccattcgcctcatcctcaggcacacacactat
ccacgtctgatccccattattaccagtaactgtacctccaaatcagttgcagtcagaaga
cgctgttatgagttcctcgacctcatgctgcaggagtggcacactaacaccttggaaaga
catgtggctgttctgaccgagaccatcaagaaaggcatacatgatgcagactctgaagct
agatccattgcaagaaagtgctactggggtttccatggtcactacagccgtgaggcagag
catttgttccaggccctcgagtccacttatcagaaggccctccagtcccacctgaagagc
tccgacagcatcgtgtctctgccccagtccgaccgttcctcgtcgtcttcacaagagagt
cttaaccgcccatttactgtgaaaagtgtcattggagggagcataacaaggagtaaactg
gtggggtccagggtgtccactacaccaggctccctccagcgttcccgtagtgacatcgac
gtaaacgctgcctccagcgccaaatcccgtctgtccaccgtccccgcctcctctcccttc
agctctgcgtccgcccttcccccgggatcctacgcctcactggatggcactcctggtaaa
agcgatggtcgcgttcgcacgaggagacagagctcgggcagcgtggggggagccagtgcg
tcagtagtggacagcagggggcgaagccgggccaaagtggtctcccagtcccagcgatcc
agatcagccaatcccatcagtgctggcagtcgctccagctccccaggcaagctgcttggt
cacagcagctatggccggatccctcggaccgcagcgtcagcctccactacaccagcagac
aagcgcagcaggatccctcggagccagggctgcagtcgagagaccagccccagccgactg
ggccttgccaggctgtgtggtaaagctcttctccctgctgctctcccctaccgcacgcta
gcccggagccgtattccccgccccagcatgagtcagggttgcagtcgcgacaccagtcgc
gagagcagccgtgacaccagccccgctcggggcttcactcctctggcctcccgacgtcac
tcccgttcaaccagtgctctctccacagccgacccccacggccagtcagaccgctatggt
ttgatacaccaagcaagaatttctgcatcagttaacgccatgagggtcctaaacaccggc
accgaggtggaagcagcagttgctgacgcactgctattaggagactccaggaataagagg
aagccgctgaggagacggtacgaatcgccgggcatgtactccgatgacgatgccaacagt
gatgcgtctagcgcctgctcggagcgctcgtacggctcacgaaacggaggcatcccccat
tacctgcgccagacggaggatgtggcagaggtcctgaaccactgcgccagctctaactgg
tcagagaggaaggagggcctactgggcctgcagaacctcctgaagagccaaagaattctg
agtcgagttgagctcaagagactttgtgagatcttcacaaggatgtttgcagatccacac
agcaagagagtgttcagcatgtttctggagactcttgtggacttcgtcacagtacacagg
gaggacctgcaggactggctttttgtcctgctcacccagctgctgaagaagatgggggca
gacctgctcggctcagtccaggccaaagttcagaaggcactggatgtcacaagggagtcc
ttcccattcgaccaacagttcaacattttgatgaggtttatagtggatcagactcagaca
ccaaacctcaaggttaaggtggccattttgaagtacatagagtccctcgctcggcagatg
gacccaacagactttgtcaactcgagcgagacgaggctggcagtgtctcgaattattact
tggaccactgaacccaaaagttcagatgtcaggaagacccttcataactgggtgagcgag
gagctagctggcaggtccagtactgcagccttactgtccactgagggcaaccaggaagaa
aggtgtaagcaggccgcccaggtggtgctgatcgccttgtttgagctcaacaccccagag
tttaccatgctgctgggagctctgcccaaaaccttccaggatggagccaccaaactgctg
cacaaccacctgaagaactcgagcaataccagcagcagtgtgggttctcccagtaacacc
ataggacggacgccaccgcgccacacccccagcagaaccagccccctcacctcgccaaca
aactgctcccatggaggactttccccaagtcggttgtggggttggggtgtcgacgggctg
tcaaagcaacctgcccctgcccctcctcctcctcctccgcctcactccacccctgctgcc
ccctccttaagggtcctgcgcagagcatattcacccagcatgatggaatatgacacagaa
aacatgaactcggaagagatctacagctcactccgcggcgtcacagaagccattcagagc
ttcagctaccggagtcaggaggacctgaatgagccaatcaggcgggaaggcaagagggac
gatgcagctgggcgagaaggagtcgcatcctctcctggttctgatgcccgcttgggcttg
gacatggtggaagggggccgcaccgctttggacaacaagacgtcactacttaacacccca
tcgcctcgctccttctcaggaccacggacccgtgagtttgccccttacggttacggagaa
accatctgcacctatgacaagagcgccctgaaggaggccgtctttgacgacgatgtggag
cagtttcgcgactgccgacgtcaggaaagtggtgaaaacaagatgacactccccaaggtc
tttgctcctgcgatcggtcaggaccactcagacctggtagccgacctgctgaaagagctg
tccaatcacaacgagcgctctgaggagcggaaaggcgccctggtggagctgctgaagatc
acgcgagaagacagcagggctgtgtgggacgaacacttcaaaaccatcctcctccttctg
ctggagacgctgggtgataaagatcacaccatccgagccatggccctgcgtgtgctgaaa
gaaatactgaggaaccaaccggcccgcttcaaaaactatgctgagctcaccatcatgaag
acactggaggctcataaagactgtcacaaggaggtgctgcgtgcggccgaggaggcagca
tccaccctggccggatccatccaccccgagcaatgcatcaaggtgctgtgcccgattgtg
cagacggccgactaccccatcaacctggctgccattaagatgcaaaccaaagtcattgaa
cgcatcgccaaggactcattactgcagctgctgccggacatcattcccggactcctgcag
ggctatgacaacacagagagcagcgttcgcaaggccagcgtgttctgtctggtggctatc
tactcggtgattggcgaggacctcaaaccccacctggcacagctcacgggcagcaagatg
aagttactgaacctgtacatcaagcgcgcccaaaccaccaacagcaatagcagcagttcc
tcggacgtctcctctcacagttaa
DBGET
integrated database retrieval system
