Mugil cephalus (flathead mullet): 125018207
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Entry
125018207 CDS
T08342
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin 12/17/18, delta 2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125018207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcep04515
]
125018207
Cell adhesion molecules [BR:
mcep04515
]
Cadherins
Protocadherins
125018207
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
DUF4788
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
125018207
NCBI-ProteinID:
XP_047457939
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All DBs
Position
12:complement(15725620..15738977)
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AA seq
1091 aa
AA seq
DB search
MRLSVPIFLLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTIERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINIRVTDSNDNSPVFEKSSYV
IEMAENSPLGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGIIKVQGEI
DYEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTMYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSTVRVNVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNEDHLFEMDPVGGEVRTAHALWEEVAPVVELVVKVTDHGKPPLSAVAKLIIKANT
ETAAGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTETQAKRMSVIQTENFSSEPNYAGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
NSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSTSSSPTKSSMPLNLANQE
SKEERDGGSDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGS
DCALDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccatattccttctgctgtgggttaaagccctgacattgaaaaat
ctcaattattccgtccctgaggagcaaggacctggaactgttataggtaatatagcgaaa
gacgccggatatgggaccatagagagagggaaaaaatcgaacttcagagtgctggagaat
tctgcaccacatctggtggacgttgacccggagagtggactaatcttcaccaaacaaagg
attgacagggaaacgttatgcaggcgcaacccaaagtgccagctctctatggaggtgttc
gctaacgacaaggaaatatgcatgatcaagattgatattcaggacataaatgacaactcg
cccagttttccctcagatcatgttaatattgatatttcagaaaacgcagctgctgggacg
cgcttccctctcaccattgcacatgactcagattctggggaaaatgggatcaagacctat
caggtcacaagagatgattacaatacgttttctttggatttaaaagtgaggggcgatggg
actatatatccagagctggtggttcagagacctctggatagggaggatcagagtcatcac
accctcctcctcacagcaattgacggcggggagtatccaagatcaggctccatgcagatc
aacatccgagtgactgattcaaatgacaatagcccggtttttgaaaaatcctcttatgtg
atagagatggcagagaattcacctcttggcaaagtacttatagatttgaatgccactgat
caagacgagggaagcaacggacaggtggtctattcctttactggatatgcatctgagcga
atacaagatctgttttccattgaccccaatactggcatcatcaaggtccagggagagatt
gactatgaagagaatccaatcattgagtttgatgtgcaagctaaggatttggggccaaac
ccgataccaggccactgcaaaattacagttaaagtgcttgacaaaaatgacaactcgcca
ataataagttttgtttctgtgcggcagggagccatcagtgaggcagcacctccagaatct
gttatagcgctggtcagagtgacagataaggactcgggccgtaatggtcaactccagtgc
cgggttctgggaaacgtacccttcagactgcaggaaaacaacgataatttttacacactg
ctgacagacagacccctggacagggaaatgaaagatgagtacaatgtaacaatcgtggcg
agagacaatggcatcccttctttgaactacaccaagtcgtttactgtgaaaatcttggat
gagaatgacaatgcgcctcgctttacaaagactatgtatgtgttgcaggtgcctgagaac
aacatcccaggggaatatctgggctccgttctggcccacgacccagatgtaggtcgaaat
ggaacagtgtcttactctattctaccctcacatataggggatgtttcggtgtacacgtat
gtgtccgttaatcccaccaatggagccatatatgcctcgcgctctttcaattacgagcaa
acaaaatcctttgagttcaaagttcaggctaaagatggaggatcccctcacatggagagt
acctccacggttcgagtcaatgtcctcgacgtcaacgacaatctgccagttattatttta
cccctcctgcaaaatgatacagcagaaatcccagtgcccagaaatgtaggcattgggtac
attgtggctacagtgaaagctgtggaccacgaccatggagaaagtggccatttgacctat
gagatcactgagggaaatgaagaccacctgtttgagatggatccggtggggggtgaggtc
agaacagcccatgctctttgggaggaggtcgccccggtagttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtggctaagctgatcattaaggcgaacaca
gagacagcagcaggagggggttccagcgcgagcggggaacagcaacactgggatgtgtcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagcagtcatgaccgcc
attgctgtcaagtccaagcatcaagataaggagactgggaattataactgccgcatggct
gaatactccaatcctccagtggggaagggaaaaaagaaacggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggagagagattctgcgagccggatgaatgtggtgagc
agcccctcactcatcacctcaccaatatgctttgactaccagagccctctgccactcacg
ctgcccaggtctgaggtcatgtacctgaaaaccaccccgaacagcctgacagtacccaga
gcgggttgccactccagctttgccgggcttagcacagaaactcaagcgaaaaggatgtca
gtgatacagactgaaaatttctcctcagagcccaattatgctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctccgagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacgtct
gccagggaggccctcaagatgaaagcaacagcagttaatggccagccttttgaacaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
aacagcagaaaaaccctcagcacgtttggaaaggaacagcgggacagtactatccttgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctacaggagagt
ccgtctacgtccagtagtcccaccaagagcagtatgcccctgaacttggccaaccaagag
tccaaagaagagcgggacgggggctcagacagcagtgcctatggccctccagatggccag
tgctccccactgcacaccgaattggaggagccctcctacctgacctgcgagctcaggcct
aagtccctgtcaagcagcctcattcacagttctgtcatcagccaggagtgtggggggtca
gattgcgctcttgacccgcgggactctggcaactga
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