Mugil cephalus (flathead mullet): 125018497
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Entry
125018497 CDS
T08342
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04010
MAPK signaling pathway
mcep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125018497 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125018497 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125018497 (nfkb2)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125018497 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
125018497
NCBI-ProteinID:
XP_047458403
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All DBs
Position
13:428118..445410
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AA seq
904 aa
AA seq
DB search
MAGALRMTEASYMNVYDNDLQLNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYMGLARVEVQLVTHTDPPRVHAHSLV
GRHCTENGTCTLDIGPNDLTASFGNLGILHVTKKGVVEVLTRRLREERKRQKDAHYHLTE
LEETSILKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGCWEAFGDFSPTDVHKQYAI
VFKTPPYHSTEIERSVTVFLQLRRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYE
HWRGGGGRGGGAGGFGGAGGGAGGGGGGFQFHQQMNGGGGGAGGGGTFFTGGFTGFTGGG
GAQMSGHVPQTGVTQQQSDGQTGRQAALQQQLLQIASSLNSRVSQNARNAAAALLEYCST
GDARVLLAIQRHLCGIQDSNGDTPLHLAIIHQQTGVIQQLVHTLLSSQQRSILNTANHLQ
QTPLHLAVITRQVKVLEVLLKAKADPSLPDKDGRSPLHLAALAGDSVSLRLLLAHLDEGH
AHVVNTPDYHGLHPIHLAVRRDGERCLRLLVEGGAKINAPERKSGNTALHLAVRENLFKV
ACTLITELKADINACTFGGNTSLHLAASLGSPTLCSMLIAAGADKNVENDEPLFFSSSSD
EEQDEPIREEVKGQKAASQPINPRKRPAGHTPLDLAKCQKVRNLLTSRLSPKSSRHIGRK
KTISNEEVEASGLDEETLSRLVELLSVGDVPWRKLAEKLGMLTLTHLYQDTATPCHHLLQ
HYQLGGGHVDTLVEALQCLGLTEGVRLLREKEEQRDKMNTDATVDSGFGSQPMEEEEEPA
SANQ
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctgaggatgaccgaggcgtcctacatgaacgtgtacgacaacgatctg
cagctgaatttgatgcagtacgactacattcctccagtcgacataaagactgagccctac
atacctgagacagctcatggtccctacattcagatcatcgaggagcccaaacagagaggc
ttccgtttccgttatgagtgtgagggtccgtcccatggtgggctcccaggggcctccagc
gagaagaacaggagaacctaccccaccgtaaagatcaacaactacatgggtctcgcccgg
gtggaggtccagctggtgacccacaccgaccccccccgggtccacgcccacagtctggtg
ggacgccactgcaccgagaacggcacctgtacgctggacatcggccccaacgacctcacc
gcctcgtttggtaacctggggattctccatgtgaccaagaaaggtgtcgttgaggtttta
accaggaggctgagagaagagaggaagagacagaaagacgctcactatcacctgacagag
ctggaggagacctccatcctgaaggaggccaaggagctggggaaggtgatggacctgaac
atagtcaggttaaagttcaccgcctacctgcaggacagcaacggcggcttcaccagagcc
ctgaaacccgtcgtctccaaccccatctacgacagcaagtcgccaaacgcctccaacctg
aagatctctcggatggataagacgtgcggctcagtcctggggggcgacgagatcttcctg
ctctgcgacaaagtccagaaagatgacattgagatccgtttctatgaagaggatgatgaa
ggatgctgggaggccttcggagacttctcccccaccgacgtccacaaacagtacgccatc
gtcttcaaaacgcctccgtaccacagcaccgagatcgagaggtccgtcaccgtcttcctg
cagctgaggaggaaaaaggccggagacagcagcgaccccaaacagttcacctacataccc
caggtccaagacaaagaggaggtgctgaggaaaaagcagaagccgctgcctcactacgaa
cattggagaggaggaggaggaagaggaggaggagctggagggtttggaggagcaggagga
ggagcaggaggaggcggaggagggttccagttccaccagcagatgaacggaggaggagga
ggagcaggaggaggaggaactttctttactggaggcttcacaggcttcactggaggggga
ggagctcagatgtcaggccacgtccctcagacaggtgttacccagcaacagagtgacgga
cagacgggacgtcaggcggccttgcagcaacagctgcttcagatagcctcaagtctcaac
agtcgagtttctcagaacgccagaaacgctgccgccgccctgctggagtactgcagtact
ggagacgcccgggtccttctggccatccagagacacctctgtggtatccaggacagcaac
ggagacacgcctttacacctcgccatcatccaccagcagacgggagtcatccagcaactg
gtccacaccctcctcagcagccagcagcgtagcatcctcaacaccgctaaccacctccaa
cagactcctctgcacctggccgtgatcacccgccaggtgaaggtgctggaagtgttgctg
aaggcgaaggccgaccccagcctgccggacaaagatggccgcagcccgctgcacctggcg
gcactagctggagacagtgtgtcgctccgccttctgctggctcacctggatgaaggccac
gcccacgtggtcaacacccccgactaccacggtctccaccccatacacctggccgtgagg
agggatggtgagcgctgtctccgcctcctggtggagggcggagccaaaataaacgcacct
gagcggaagagtggaaacacggcccttcacctggctgtaagagagaacctgttcaaggtg
gcctgcaccctgatcacagagctgaaggccgacatcaacgcctgcacctttggaggaaac
acatcgttacacctggcagcaagtctgggatcccccaccctctgctccatgctcatcgct
gcaggtgctgataagaatgtggagaacgacgagccgctcttcttcagctcctcttcagac
gaagagcaggacgaaccaatcagagaagaggtcaaaggtcaaaaggccgcctctcagcca
atcaaccctcggaagagaccggcaggacacacccccttggacctggctaaatgccaaaag
gtcaggaacctgttgacctccagactgagtcctaagtcgagtcgtcacatcgggaggaaa
aaaacaatcagcaatgaagaggtggaggcttcgggtctggatgaggagactctgtcccgg
ttggtggagttgctgagtgttggagacgttccctggaggaagctggcggagaagctgggg
atgttgacgctgactcacctgtaccaggacacggccacgccctgccaccacctgctgcaa
cactaccagctggggggtggacatgtggacactctggttgaagctctgcagtgtctcggt
ttgacggaaggagttcgactcctgagagagaaagaggagcaacgagacaaaatgaacaca
gacgccacggttgacagtggcttcggcagccagccaatggaagaggaggaggagccggcc
tcggccaatcagtga
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