Mugil cephalus (flathead mullet): 125018727
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Entry
125018727 CDS
T08342
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125018727 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125018727 (vps8)
Membrane trafficking [BR:
mcep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125018727 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps8
Clathrin
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-C3HC4
zf-RING_2
zf-C3H2C3
PHD_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125018727
NCBI-ProteinID:
XP_047458877
EnsemblRapid:
ENSMGCG00000001135
LinkDB
All DBs
Position
13:24916564..24960530
Genome browser
AA seq
1405 aa
AA seq
DB search
MSQSPDARSLVSASSQLNLMEVDSIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
SVLNTDNIDTHSCDTSSLASSDSGDPAYLKRKKRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALIFGKDTSQALRLCLGNKTSEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLAHGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRAPPDFKDHPVTHYCLLAMASLTKILV
IGLKPTLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPVLAFCKGDTVHFLLVKKEDTG
TIHVIKQRQLHLSCDIISLSWINSHTLVLVDSHEKLQVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMTLRNWRERIDCLL
KQEHFIEALSLAWSFHEGTAKAVVGLFGDPLKRKAVVSDKMVEILFHFGEHALKKCPEHG
KIQVMEQHFQDVVPVLVDYCLLLQRADLLFDQIYARLCENTVAKGVFLESLESYIIADRL
GHLSAPIMKDLLAHYHGSGMMHSLERCIVHLDVTSLDIQQVVQLCWENQLFDAMIYVFNS
GMNDFITPMEKLFAVIGPTLKGGRSLSDEDVVMGNKLLVYISCCLAGRAYPRGDIPEDLV
VQVKHQVFEFLIRLHSAESSEEEEVFPYIHTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQAGAAVQFNEERLLTLAEKAKFYQICEFLYEKKHLYDRIIDCYLK
DPLRKWEIFSYIHNLLSMPGYSPDEKQTVKNKALQLIQELVTLDPSKSADLVVFHFTEEV
QQIISELQDDQLRFKFLSCLLEPREGFQMEFILPLERDLHELFLDLLCRFDRSQLLSFLQ
TSHHYRLEEAIQIMKQYHCNEATAYLLEKKGDVQGAFAVLLETLREKLSLFTAESDRGAE
GQAGTQDDDEIDNESTLMRVKESLNDIIAFCQRSCQNLDRQQREVLWFPLLDTMMASQKQ
VIGLNAKHTSEVLKEQTMKVLNCMSSFISLPAIIQQILQDPVYGKGKLAEVQCLILGMLD
TFNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDCCNICLQHYKGKQDSAEEII
VFSCGHLYHLQCLQQKDCGLGSATEANQRWRCYKCSSSHGGRGRPFSEAKRGRVMSLAQT
HVTSAHHDMGAVAHRKKVFVETTLDLQQEQSWDQIRCLYRGPSRLSMLSELSHSRSSEKT
GFLISVQPEKESFQLKLSPPPLLEE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtctccagacgcccgcagcctagtgtctgcctcttcccagttgaacctgatg
gaggtggactcgatcgacgataaggaatttgacattccccaagtggatacacctcccaca
ctggagagcatccttaatgagttggaggatgaggaggagccatttgtgttggaggacact
tccgtgctaaacacagacaacatagacactcactcctgtgacacctcctctctagccagc
tctgatagtggagaccctgcatatctcaaaagaaagaagaggacagtggatctgaatgca
acggttcatggatccgtccttcgacacagcctgctgaagggtatctctgcacagatcgtc
tctgctgctgacaaagtggatgctggactgccaactgctataactgtgtcaggtgtaatt
gctgtgggaacgtctcatggcctggctctgatctttggaaaagataccagtcaagccctg
cgactatgtttgggtaacaagacatcagaatttggagctgtctccgcccttagcatcaac
catgattgctcacgacttctctgcggttttgctaagggacagattacaatgtgggatctc
gcccacgggaagcttctaaggactatcactgatgcccaccctccaggaactgcaatactg
catgtgaagttcacagatgaccccactcttgcagtgtgcaatgatagtggaggatcagtt
tttgaactggctttcaggagggtcatgggtatgcggtcctgtgactctcgatgtctcttc
agtggttctaaaggggaggtctgttgtattgaacctttgcgtgctcctccagacttcaaa
gaccatcccgtaacacactactgtctgctggccatggcctctctcactaagattctggtc
attggactaaagccaaccctgaaagtctggatgacttttccttacagcaagtctgatccg
tccagtgttcctcagcttgcctggcagtttgttcctgttcagaagacagtcaatccagtc
ctggctttttgcaaaggagatacagtccacttccttctggtaaagaaggaggacacagga
accattcatgtcatcaagcagcgacaactccacctcagctgtgacattattagcctcagt
tggattaacagccatacactggtccttgtagacagccatgaaaagctgcaggtcgtggac
agaccctctcaggaggttttggagactctggacttggagcaggtgcaactggtctataac
agccggcatttcaaatcgctggccactggaggaaatgtctcccaggcgttggctttagtg
ggagaaaaggcttgttaccaatcggtctcaagctatgcagggcagattgtctatttgggt
accaagtcagctcacatcatgactctaaggaactggagagagcgcatagactgtttactg
aagcaggagcatttcattgaggctctctctttggcctggtccttccatgagggaacagct
aaagctgtggttggcttgtttggtgatccactgaaaaggaaggcagtggtcagtgacaag
atggtggagatacttttccacttcggagagcacgcattgaagaagtgtccagaacacggc
aagatccaagtgatggaacagcatttccaggatgtggttccagtcctggtagattactgc
ctgctgcttcagagggcagacctgctgtttgaccagatttatgcccgactgtgtgaaaac
acggttgctaagggtgtcttcctggagtctctggagtcgtacattattgctgaccgtctt
ggtcacctctccgctcccattatgaaggaccttctggcccattaccatggcagcggtatg
atgcacagcttggagagatgcattgtccatctagatgtcacaagcttggatatacagcag
gtggtccaattgtgttgggagaaccagctctttgatgcaatgatctacgttttcaacagt
ggcatgaatgatttcattactccaatggagaaactctttgcagtaattggcccaacactg
aagggtgggaggagcctatcagatgaggatgtggtcatgggaaacaaacttctggtgtac
ataagctgctgtctcgcagggagagcatatccacgtggagacatccctgaagatcttgtg
gtgcaagtcaagcaccaggtgtttgagttcctgatccgtctccattcagctgaatcatca
gaggaggaggaagttttcccttatattcatacactgctgcactttgacactcgggaattt
ctcaatgtccttgccatgacatttgaagactttaagaatgacaagcaggccctagagtac
cagcagaggatagtggacatcttacttcaggtgatggtggacaacccagactttactcct
tcccaggtgggcgggctcttcacctttttagctcgccagttggccaagccggacaacaca
ctgtttgttaacagaaagctctttgatcaggttctggagttcctgtgttgcccagatgat
gactcccggcacactgaaagacaacaggttctcctggagctgttgcaggccggagcagca
gtccagtttaatgaggaaagactgttgactttggcagagaaggccaagttctaccagatc
tgtgaatttctttatgagaagaaacatctgtatgacagaatcattgactgctaccttaaa
gaccccctcagaaagtgggagatcttcagctacattcataatctgctctccatgcctggc
tacagccctgacgagaaacaaacagtcaagaacaaagcactgcagcttattcaggagctt
gtgacccttgaccccagcaaatcagccgaccttgtggtgtttcattttacagaagaggtg
cagcaaatcatttctgagcttcaggatgaccagctacgtttcaaattcctcagctgtctc
ttggagccccgggaaggctttcaaatggagttcatcctgcctttagaacgtgacctccat
gagctttttctggacttactgtgccgctttgaccgcagccagctcctgagcttcctccaa
acctcccaccactacagactggaggaggccatacaaataatgaagcagtaccactgtaac
gaggccacagcgtatctgcttgagaagaagggtgacgtgcaaggggcgtttgctgtcttg
ttggagacactgagggaaaagctgagtctcttcactgctgagagtgaccgaggagctgaa
ggacaagctgggacacaagatgatgatgagatagacaacgaatcaacactgatgagagtg
aaggaatcactcaatgacatcattgccttctgccaacgaagctgtcagaaccttgatagg
caacagagagaggttttatggtttccacttttggacaccatgatggcctctcagaaacaa
gtgataggtcttaatgccaaacatacgtctgaagtgctaaaggagcagacaatgaaggtt
ctcaactgtatgagcagcttcatttctctacctgccatcattcaacaaatattgcaggac
ccagtctatgggaaaggaaagctggcagaggttcagtgcctcatcctgggtatgctggac
actttcaactatgaacagactttacttgaaacaactacaagtctgttgaaccatgacctc
cactggtccctggctcacctgcgtgctgctgtcacaaggggactccacccacgacaagac
tgctgtaacatctgcctccagcactacaaggggaaacaggattcagctgaagagatcatt
gtgtttagctgtggccacctttaccatttacagtgcctgcagcaaaaggactgtgggctg
ggctctgctacagaggctaatcagcgatggaggtgctacaagtgttcttctagccatgga
ggaagggggaggcctttctcagaagcgaaaagaggtcgtgtcatgtcactggcacagact
catgttacatcggcacatcatgacatgggagcagtggctcacaggaagaaggtgtttgtt
gaaacaacgttggaccttcagcaggaacagtcctgggatcagatacggtgtttataccga
ggaccatcaaggttgtccatgctttcagaactgtcccactcccgttccagtgagaagaca
gggtttctaatatccgtccaaccagaaaaagaaagtttccagctcaaactatctcctcca
cccctattggaagaatag
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integrated database retrieval system
