Mugil cephalus (flathead mullet): 125018779
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Entry
125018779 CDS
T08342
Symbol
srfB
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125018779 (srfB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcep03000
]
125018779 (srfB)
Transcription factors [BR:
mcep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
125018779 (srfB)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
125018779
NCBI-ProteinID:
XP_047459067
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Position
13:complement(7877575..7900837)
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AA seq
601 aa
AA seq
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MLPSQVGSAPSGNGSASGRGTTGHGSGVVGGGIRPILVRAGQALPGVSAESAGAAGRLGE
RDAAGMLGANGPGGPRGVRPGNGAGVNPLQTAVQSNMVGLNTGVVLPHVARFEPDRECAP
LCSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVAGQEVGVSPGGYGMVPGGVAG
AKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGH
VYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSMDQRMSATGFEETDLTYQVSES
ESMGDSKDALKPTFTVASLPGTVSSAQSTVPTTSTTMQVSTGPSFPITNYLAPVSANSNV
GANGTVLKTSASTGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAA
APQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHHNTQSTSNSDSSPEISHTSTNSTAT
VSLPATIVTSSMPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
GQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKS
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatcggcaccatctggaaacgggtcagcttcgggcaggggt
accacaggacacggttcgggggttgtcggcggcgggattcgtcccattttggtgagagca
gggcaagctttaccgggggtcagcgccgagagcgccggagccgcggggcgactgggggaa
agagacgccgccgggatgctgggtgccaatggtccaggtggtccgagaggtgtgagaccg
gggaacggagccggagtgaacccgctgcagaccgccgtccaaagcaacatggtggggctg
aacacgggggtcgtgttgccgcacgtagctcggttcgagccggaccgggagtgcgctcct
ctgtgcagcggctcggataacgactcggactccggagacgatgatgacccagtgggttca
ctcggggacagcaggagaggggtgaagcgggagagaggcgagatggaagccgcggtggcg
gggcaggaggtgggagtatctcccgggggttacggcatggtgcccggaggggtcgccggg
gcaaagccggggaagaagacacgtgggcgcgtaaagatcaagatggaatttattgacaac
aagttgagacggtacaccactttcagcaagaggaagacgggcataatgaaaaaggcctat
gaactctccaccctgacgggaacccaggttctcctgctcgtggccagcgaaacgggacac
gtctacactttcgccacacgcaaactccagcccatgatcaccagtgaaacgggcaaagcc
ctcatccagacgtgcctcaactcgccggactcgccgccccgctccgacccctccatggac
cagcgcatgagcgccacgggcttcgaggagacggacctcacctaccaggtgtctgagtca
gagagcatgggtgactcgaaggacgcgctgaagccgacgttcacggtagccagcctaccg
ggcaccgtcagcagcgcccagtccacggtgcccaccacctccaccaccatgcaggttagc
actggaccttcgttccccatcaccaactacctggccccggtctcggccaacagcaacgtc
ggcgccaatggaaccgtcctcaaaacctccgcctccacgggggtcatgcagctgccgagt
ggcttcactttcatgccagcaggcactcctctcccccccggcacccccaccattcctctg
agccagctgcagcagcactccctggccctccaggggcagcatggtcaggctctggccgcc
gccccgcagccacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctc
acaggagcaggggtcccccagcagctccaagctattcaagtacatcataacacccagtcc
acctcaaacagtgacagcagccctgagatctcccacacctccacaaactccaccgcaacg
gtaagtctcccagcaaccattgtcacttcgtcgatgccaacatccgtggcgggtcacatg
atgtaccccagcccacacacggtgatgtacgcctccacgccagcgctggccgacgggggc
ctggctgtgctcaacgcgttctcccagggaacctcggccatgcaggtgtcccatgcacaa
ggccaagacacaggtgctgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atccccgtctccgcagtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtgaacctagacgcagcacagaactcgaagagc
gactga
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