Mugil cephalus (flathead mullet): 125018888
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Entry
125018888 CDS
T08342
Symbol
prkN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04120
Ubiquitin mediated proteolysis
mcep04137
Mitophagy - animal
mcep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125018888 (prkN)
04120 Ubiquitin mediated proteolysis
125018888 (prkN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125018888 (prkN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
125018888 (prkN)
04121 Ubiquitin system [BR:
mcep04121
]
125018888 (prkN)
03029 Mitochondrial biogenesis [BR:
mcep03029
]
125018888 (prkN)
Enzymes [BR:
mcep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125018888 (prkN)
Membrane trafficking [BR:
mcep04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
125018888 (prkN)
Aggrephagy
Other aggrephagy associated proteins
125018888 (prkN)
Xenophagy
Other xenophagy associated proteins
125018888 (prkN)
Ubiquitin system [BR:
mcep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125018888 (prkN)
Mitochondrial biogenesis [BR:
mcep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
125018888 (prkN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rad60-SLD
Dsc3_N
PSV_ORF131-like_dom
Motif
Other DBs
NCBI-GeneID:
125018888
NCBI-ProteinID:
XP_047459258
LinkDB
All DBs
Position
13:complement(79195..83739)
Genome browser
AA seq
487 aa
AA seq
DB search
MILFVRYNLGPGVAVELQEEASVAELKEVVGSQQGVRPDRLRVLFAGRELQSTSTLQGCD
LPEQSTIHVLLHSGSSSNHRFLLQEENSLSRLNTSSSGLAEILEESTGQGGGGGEVEGRG
GGGAKGVGGVEGGGGVGGGGEGGGGGGVEGGGGGGEGGGVEGGGGGGGGYSRFFVFCKSC
KLIRPGKLRVRCRKCHETTMTLSRGPSCWDDVLHPGRIRGVCQSDGCQGNEAEFYMKCAS
HPTAENDLSVALDLILTNTRRVPCIACTDIMPVVLVFQCPERHVICLDCFHGYCQTRLND
RQFVHHPEIGYSLPCPVGCEESLIKELHHFRILGEDQYGRYLHYGAEECLLTIGGLMCPS
PGCGAGLLPSDGSRRVECDTHLGCGFVFCRDCRRSYHQGACQMAPAPPTGEDSQGFLVGG
EASLRGRWDQASLLFIQESTKRCPQCSVPVERNGVCMHMQCPRCGAEWCWVCGVAWNREC
MGDHWFG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtttgtgcgctacaacctggggcccggcgtggccgtggagctgcaggaggag
gcgagcgtggctgagctgaaggaggtggtggggagtcagcagggggtccgaccagaccgg
ctccgggttctgttcgctgggagggagctgcagagcacctccacgctgcagggctgcgac
ctcccagagcagagcaccatacatgtcctcctccattctggctcctcgtccaaccaccgc
tttctcctgcaggaggagaacagtctgagcaggttaaacaccagctcctctggcctggct
gagatcctggaggagagcacaggacagggaggtggaggaggtgaagtggaaggaagagga
ggtggaggagccaaaggagtcggaggagttgaaggaggtggaggagtcggaggaggtgga
gaaggtggaggaggtggaggagtcgaaggaggtggaggaggtggagaaggtggaggagtc
gaaggaggtggaggaggtggaggtggctacagtcgtttcttcgtcttctgtaaaagttgt
aaattgatccgacctggaaaactacgagttcgctgcagaaaatgtcacgagacgacgatg
acgctgagcagaggtccgtcttgctgggacgacgtcctccatcctggtcgtatccgtggc
gtctgtcagtcagacggttgtcaaggcaacgaagcggagttctacatgaagtgtgcgtcc
catccaacagcggagaacgacctctctgtggccctggacctcatattgactaacaccagg
agggtcccatgcatcgcctgcacagacatcatgccggtggtcctggtattccagtgtcca
gagcgtcatgtgatatgtctcgactgtttccatggttactgtcagactcgactcaacgac
agacagtttgtccatcatcctgagatcggatactcgctgccctgtccagtgggctgtgag
gagtctctgatcaaagagcttcatcacttcaggattctgggagaggaccagtatggacgc
tacctgcactacggggcggaggagtgtctgctgaccattggagggctgatgtgtccatca
cctgggtgtggggcggggcttcttccatctgacggcagcaggagggtggagtgtgacaca
cacctgggctgtggctttgtcttctgcagggattgtaggcggagctaccaccagggggcg
tgtcagatggcgccggccccacccactggcgaagactcacagggcttcctggtgggggga
gaggcgtctctcagggggaggtgggatcaagcgtcgctgctcttcatccaggagtcgacc
aaacgctgcccccagtgttcggttcctgtggagagaaacggcgtgtgcatgcacatgcag
tgtcctcggtgtggagctgagtggtgctgggtctgtggagtggcctggaacagggagtgt
atgggagaccactggttcggataa
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integrated database retrieval system
