Mugil cephalus (flathead mullet): 125018927
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Entry
125018927 CDS
T08342
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
mcep
Mugil cephalus (flathead mullet)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
FN3_Tor_3rd
DUF4959
Motif
Other DBs
NCBI-GeneID:
125018927
NCBI-ProteinID:
XP_047459337
LinkDB
All DBs
Position
1:complement(23644250..23691369)
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AA seq
1587 aa
AA seq
DB search
MSSSLLSSSSSSSSSSLWLMLYLPLSVVLLLSSGVHGQGRLKLTVLSEDRLQMKWKEADG
PVQGYKVRVRSNSDVPQPELMLTTTRGRATVAGLDSSQEYTLQVLVLNGTTEKLLAKRRF
TMEALREEEMIRSGSREQRKKLLPGGSGSGDLDDAAETLLGAPTVLYPESTTTTAAAATP
TEPPATEIPPQPPGEAPEKTTKEKRKRKKEKERDRSKVEDKEEQGTTQGKPAEEKPRKTP
FTTQPVTGASPRKPFQCESNAAADIMLLVDGSWSIGRTNFRRVRDFLEGLVMPFHIGPNH
IQIGLTQYSGDPRTEWHLNNFTTKEQLLEAVRNFRYKGGNTFTGQALLHVMEENMRAEAG
ARSEAPFFLVLLTDGKSQDDAIAAANRLKSAGVEIIAVGVKNADEAELRQVASEPVDLNV
YNVNDFPLLSKLVARLVHILCGRIEDRGVTKRFEAGPTADPALSYPSPTDLRFSDLGSRD
VKLHWINPTKPVQQYRVVYHSAEGQSPQEVVLPGSESTVLLEGLSSQTLYHVSIFPVYED
NVGLALRGTVTTLSLAMPDDLKVTPSSFSSLRVSWGAAPGATQYMILYSALSHGEPDDAK
EEKFGADQTVVELAGLLPATDYSITLYALYDEEPSDPVTAVATTFPLPPPLSIQFPMVTH
SMLRVSWAPGAVDVPGHRIIYSTNHGSDVKKVEVTGLNSVLVQNLSSLSRYLVSVQSLYP
QGLSAALTSNVTTLKVPSPSNLRVTNFSGSDITVRWEAAADDVVSYLIKWISLSGGDLRQ
LRVSGDSEGAILEGVEDDKEYQVSLSALYGDGAQSEAVAIRYSTLSGGGPSGVTVSEETA
VSLLVSWVPPNAHVLQYRVSYTPLTGAETQDSTVVVAGGDKRVVLESLQPDTRYSILVTA
EYRNREGGSASAQGKTTSLRVSSVSVVRSDHSSICVSWRPVSAVDGYRIVIQSVKDKQTK
QETVDESSSSHCFTDLEPETLYRIGVHSLLGSAEGAAVSILHPTATAPVRIPIHPRMYPI
HNEVCPEVNIRNNIVKGFDMMEAFGLTQRAHSSVEGVAAEPFVFNTLPTYTLYRDVQLTQ
STRFIHPAGFSPEHTISIAFRMLQDTPREPFALWQLTDNDFQPKMGVVIDPVSKHLLYFS
LDYRGEVQELTFDQPQVHKLFYGSFHKVHLSISQVSVSLSVDCQRVGERPARPLGNLPTD
GFEMLGKLVKTRGPNSGSAPFQLQSFEIVCNITWASEDTCCDLPGVRDEESCPAPVYSCT
CSSDVPGAPGSPGPTGKPGPRGEKGDKGDQGQKGEAGPPGKPGFEGGLGPVGGAGPRGIA
VQGKMGPPGATGEKGDPGRPGVQGLPGPPGPKGEEGIPGPKGIRGVEGNMGPPGLTGPRG
FQGMPGYPGPAGDRGPSGPVGPTGLSGNKGERGEKGEPQSMAMIYQLVTQACEQLIHKEV
MKLDSFMNEVNRKPAPIEEPVGPPGEPGIPGPRGPPGTRGSQGNIGSRGRPGRPGYPGEQ
GRRGVQGAKGDSGANVHGPSGIKGFPGPAGESVLGPPGPTGDGGTLGPSGVPGPPGQPGE
IGPPGVCDSSGGCHQVPQQTEDYGYEP
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttccctcctttcctcttcgtcatcgtcgtcgtcatcatctctctggctgatg
ctgtatttgccgctgagtgtcgtcctgctgctgtcgtcaggggtccatggccaaggtcgt
ctgaagctcacggtcctgtctgaagacagactgcagatgaaatggaaggaggctgatggg
ccggttcagggctacaaggtccgagtgagatcaaactcagacgtgccgcagccagagctg
atgttgacgaccacgcggggacgggccactgtggcgggactggactccagtcaggaatat
accctccaggtccttgtgctcaatgggacgacagagaaacttctggcaaagaggagattc
accatggaggctctgagggaggaggagatgatccgcagcggcagtcgagagcagaggaag
aagctgttgccgggcggctcggggtcaggagacctggacgatgcagcggagaccctgctg
ggcgcgcccacggttctgtatccagagtcgacaaccaccacggccgcagctgccactccc
acagagcccccagctacagaaattcccccccagcctcctggcgaagctccagagaaaacc
accaaagagaagaggaagagaaagaaagaaaaagagcgcgatcgctctaaggtggaggat
aaagaggagcagggaacgacgcagggtaaaccggccgaggagaaaccccggaagacaccc
ttcactacgcagccggttacgggtgcgtctccaaggaaaccattccagtgcgagagcaac
gcagcggccgatatcatgctgctggtggacggctcctggagcattggacgcaccaacttt
agacgggtcagagatttcttggaggggctggtgatgcccttccacattgggccaaaccac
attcaaatcggtctgactcagtacagtggagacccccgcacagagtggcacctcaacaac
ttcacgaccaaagagcagctgttggaggcagtgaggaatttcagatacaagggagggaac
acgtttacaggtcaagcactgctccacgtcatggaggagaacatgagggccgaggcagga
gccaggtctgaggcgccgtttttcttggtcttgttgaccgacgggaaatctcaggacgac
gccatcgctgcggcaaaccgtctgaagagcgcgggcgtggaaatcatcgctgtgggcgtg
aagaatgcagatgaagctgagctgaggcaggtggcgtctgaaccggtggatctgaacgtc
tacaacgtcaacgacttcccgctgctcagcaaactggtggcgcgcctggtgcacatcctg
tgtgggaggatagaggaccgcggcgtcaccaagcgttttgaggccgggcccacagccgac
cctgccctctcatacccgagtcccaccgacctccggttttctgatctcgggtccagagac
gtgaagcttcactggatcaatcccaccaagccggtccagcagtacagagtggtttaccac
agcgctgagggtcagagcccacaggaggtggtgctgcctggctctgagtccacggtgctg
ctggaaggcctctcctctcagacgttgtaccacgtgtccatcttccccgtgtacgaagac
aacgtcggcctggcgctaagagggacggtcaccactctgtccctggcgatgcctgacgac
ttaaaggtgactccttcctcgttcagctccctgcgggtgagttggggcgcagcacccggt
gcgacgcagtacatgatcctgtactcggcgctgagccacggagaacctgacgacgccaag
gaggagaagttcggtgcagatcagacggtggtggagctggcggggttactaccggcgacg
gactactccatcacgctgtacgccctctatgacgaggagcccagtgaccccgttactgcg
gtcgccaccacattccctctcccaccgccactgagtattcagttcccgatggtcacccac
agcatgctgagggtgagctgggcgcccggcgccgtggacgttcccggccacaggatcatc
tacagcaccaaccacggcagtgacgtcaagaaggtggaggtaaccggcctgaactcagtg
ctggtgcagaacctgtcctctctgtccaggtacctggtgtctgtccagtctctctaccca
caaggcctgtctgcagcactcaccagtaacgtcaccacactgaaggttccctccccgtca
aacctcagggtgactaacttctcgggcagcgacataacggtgcgctgggaggctgcagct
gacgacgttgtgtcttatctcatcaagtggatctccctgagtggaggagacctgagacag
ctgagggtgagcggggacagcgagggggcgatcctggagggcgtggaggacgataaggag
taccaggtgtctctgtctgctctgtacggagacggagctcagagcgaagccgtggccata
cgctacagcaccctgtccggaggaggtccatccggcgtgactgtttccgaggagactgcg
gtcagcttgctggtcagctgggttccccccaacgctcacgtcctccagtatcgtgtttcc
tacacgccgctgaccggagctgagacccaggacagcacggtggtggtcgcgggcggcgat
aagcgggtggtgctggagtccctgcagccagacacgcgttacagcatcttagtcaccgcc
gagtatcgcaacagggagggaggcagcgcgtcggctcagggcaaaaccaccagtctgaga
gtcagcagcgtgagcgtggtccggtcagaccactccagcatctgtgtgtcctggaggccc
gtgtccgccgtggacggatatcgcatcgtcatccagtctgtgaaagacaagcaaacgaaa
caagaaaccgtggacgagtccagcagcagccactgcttcacggacctggagccggagacg
ttgtatcgcatcggcgtgcactccctcctcggctcggcggagggcgccgccgtctccatt
ctccacccgacagccacagctccagtcaggatacccatccatccccggatgtacccgatc
cacaacgaagtctgtcctgaagtcaacatcagaaacaacatcgttaaaggcttcgacatg
atggaagcgttcggtctcactcagagagctcactcgtccgtggagggggtggcagccgag
cccttcgtcttcaacaccctccccacctacaccctgtacagagacgtccagctgactcag
agcaccaggttcatccaccctgcaggcttctccccggagcacaccatcagcatcgctttc
cgcatgttgcaggacacgcccagggagcccttcgctctctggcagctcacggacaatgac
ttccagccgaagatgggagtggtgatcgaccctgtttccaagcatctgctgtacttcagc
ctggactacaggggagaggtgcaggaactgaccttcgaccagcctcaggtccacaagctg
ttctatggcagcttccacaaggttcacctgtccatcagccaggtgagtgtttctctgtcc
gtggactgtcagcgtgtgggtgagagaccggcccgtcctctaggaaacctgcccaccgac
ggattcgagatgctggggaagctggtgaagacgcgaggacccaatagtggatctgccccg
ttccagctgcagtcctttgagattgtctgtaacatcacgtgggcgtcagaggacacctgc
tgtgacctgcctggagtgagagacgaagagagctgtcctgcccctgtgtactcctgtacc
tgttcctctgacgtccctggagctcctggttctccaggaccgacggggaagccaggtcca
cgtggtgagaaaggtgacaagggagatcaaggccaaaagggcgaggctggtcctccaggg
aaacccgggtttgagggaggacttggacccgtgggtggagccgggccccgaggcatcgct
gtgcagggcaaaatgggtccacctggagccacgggagaaaagggagatcctgggcgacct
ggagttcagggtttaccagggcctccgggtccaaaaggagaagaagggatcccaggcccc
aagggcattagaggtgtcgaaggtaacatgggaccaccgggcctcactggaccgaggggt
ttccagggaatgccaggatatccaggtcctgcaggagatcgtggtccctcgggacctgtt
ggacctacggggctgtctggaaataaaggggagcgaggagaaaagggcgaacctcagtct
atggccatgatctatcagctggtcacacaggcctgtgagcaactaatacacaaagaggtg
atgaagctcgacagtttcatgaacgaggtgaatcgtaagccagctcctattgaggagccg
gtggggcctccgggggaacctggcataccagggcccaggggcccaccgggcaccagaggc
tcccaggggaacattggttcaagagggagacctggcaggcctggatatccaggagaacag
ggaaggaggggtgtgcagggcgcgaaaggtgattcaggagccaatgtccatggaccctct
gggattaaaggattcccaggtcctgcaggtgagtctgtgctgggacccccaggtcccact
ggagatggcggtacattaggaccatcgggtgtccccggacctccgggtcagccaggagag
atcggaccaccgggcgtgtgtgacagtagtggaggctgccaccaggttccccagcaaaca
gaagactatggctatgagccctga
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