Mugil cephalus (flathead mullet): 125019223
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Entry
125019223 CDS
T08342
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125019223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125019223
03016 Transfer RNA biogenesis [BR:
mcep03016
]
125019223
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
125019223
Messenger RNA biogenesis [BR:
mcep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
125019223
Transfer RNA biogenesis [BR:
mcep03016
]
Prokaryotic type
tRNA degradation factors
125019223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
Motif
Other DBs
NCBI-GeneID:
125019223
NCBI-ProteinID:
XP_047459774
LinkDB
All DBs
Position
13:complement(19625879..19634437)
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AA seq
770 aa
AA seq
DB search
MRYLLQLGRSCARLHVRLCHQSVYSRHKNLRSVGVDLGEKKLEISSGKFAKFADGSAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPPGYFYDTQILCNLLAVDGVNDPDVLAINAASAALAISDIPWHGPIGAVRVG
IVNGELLINPTRAEMASSTLNLIIAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IIHAIQQLAREQKVTKRTPIKMFSAPDDMVEHVKRLSSEKIYAVFTDYTHDKISRDEAIN
KVRLETEEDLKEKFPQAETFEIIEAFNIVSKEVFRDLVLNEYRRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESSIKADIITTALSGIKDKNFMLHYEFPPYAT
NEVGKIGGLNRRELGHGALAEKALRPIIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKANPEKPAEIEDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKLVMEAIQQGTVAKREILGIMNKCIAKPRESRKDSGPVVENVRVP
VSRRAQFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMGEAQQFISEICKDDQQ
QQLEFGAVYTATIIEIRDIGVMVKLYPNMTPVLLHNSQLDHKRIKHPSALGLEVGQEIQV
KFFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMGSSNSQTTSADS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacttgctccagctgggccgctcgtgcgcccgcctccatgtccgtttatgtcac
cagagtgtttacagcagacacaaaaacctacgaagtgttggagtggaccttggagaaaag
aagcttgaaatctcttcaggaaagtttgccaaatttgctgatggctctgctgttgtacag
ctgggcgacacctccgtgatggtgacggccgtgagcaaaaccaaaccttctccatctcag
tttatgcctcttgtggtggactacagacagaaagcagcagctgcaggtcgaatccccacc
aactacctgaggcgagagctgggcaccaccgacaatgagatcctcaccagcagactcatt
gaccgctcaattagaccacttttccctcccggttacttttacgatactcagatcctttgt
aacctgctagcagttgatggagtaaatgatccagatgtgctggctattaatgcagcttct
gctgccctggccatttctgatataccctggcacggacccataggtgccgtacgtgtgggc
atcgtaaatggagagttgctgatcaaccccacaagggcagagatggcttccagcactctt
aacttgattatagctggagctcccagcagtcaagtggtgatgattgaggcgtcggcggag
aacgtgctgcagcaggacttctgccacgccgtgaaggtgggagtcaagcacacccagcag
atcatacacgccatccagcagctggcgcgagaacagaaagtgaccaagcgcaccccgatc
aagatgttctcagccccggatgacatggtggaacacgttaagagattatcctctgagaag
atctatgctgttttcactgattacactcatgataagatttcaagagatgaagctattaac
aaggttcgactagaaactgaggaggacctaaaagagaaattccctcaggctgagactttc
gaaatcattgaggccttcaacatcgtgagcaaagaagtcttccgggatttagtgctcaat
gagtacagaaggtgtgatgggagggagttgacagctctaaggaacatttcttgcgacgtg
gatctttttaagccgctccatggctcagctctgttccagagaggacaaacacaggtgctg
tgcagtgtcacatttgactccctggaatccagtatcaaagcagatattatcaccacagct
ttgagtggcatcaaagacaaaaacttcatgcttcattatgaattccctccatatgcaacc
aacgaggtgggaaagatcgggggcctcaacaggagagaacttggacatggggctctggcg
gagaaggctctgaggccgatcattcctaaagacttccctttcactatccgggtcacagcc
gaggtgctcgagtcaaacggatcgtcatcgatggcttcagcgtgtggaggcagcctcgct
ctcatggatgcaggcgtacccatctcgtctgctgttgcaggtgttgccattggcctcatc
tccaaggcaaacccagagaagcctgcagagatagaagactacagactactgactgatatt
ctgggaatagaggattacctcggagacatggacttcaaattggcaggaacaaacaagggt
atcaccgctttacaggctgacgtgaagattccaggtttgcctctgaagctggtcatggag
gcgatccaacagggcactgttgcaaagagggaaatcttgggcatcatgaacaaatgtata
gcaaagccccgagaaagcaggaaagacagtggacctgttgttgaaaatgtgcgggtgccc
gtgtccagacgagctcagtttgtcggcccgggaggatacaacctgcgcaggcttcaggca
cagacaggtgtgacgataagtcaggtggacgaggagaccttctctgtgttcgctccaacg
ccgggagccatgggcgaagcccaacaattcatcagtgagatctgcaaagatgatcaacaa
cagcagctggagtttggtgctgtctacactgccactattatagaaataagggacattggt
gtgatggtaaaactttatcccaacatgactcctgtcctgctgcacaactcacaactggac
cacaaacggatcaaacatccaagtgctttgggtttagaggtgggacaggagatacaggtc
aagttcttcggacgagacccaacagacggtagaatgagactctcgcggaaggtgctccag
tctccggctgcgactgtggtcaagacactaagcgagaagcagagcatctccatgggttca
agcaacagccaaacgaccagcgctgactcgtga
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