Mugil cephalus (flathead mullet): 125019234
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Entry
125019234 CDS
T08342
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125019234 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125019234 (polr1b)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125019234 (polr1b)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125019234 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
125019234
NCBI-ProteinID:
XP_047459799
LinkDB
All DBs
Position
13:complement(6540369..6546861)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSTKWSNLPKAPSLKNLTEGRFGELKETQHAAVQDLTKAHIESFDQAVTEGLNRVVQA
IPPLEFTVKNDRISLVFVEATLHNPMVAKGSICREMKVFPAECRGRRCSYRGKLVADVSW
SVNGVPKGIIKQSLGQVPIMVKSARCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNFPIVMSRPKWKSRGQGYTQYGISMRSVRDEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCASEMLRMVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANILLDECICIHLKSDIEKFYLLCLMNRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKEKMTAWLVSVKMALTKRGQRYSADCSAESMMKIF
NMGTDLTKPFEYLLATGNLSSKSGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTFSTTSLPALLCSLGVT
PLDGSPGKPFSDCYPVVLDGAVVGWVESDLAQAVADSLRSFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLALGKQELIGTFEQLYINVGIMEDEVERGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLQAFTDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMILNKSSWERGFAHGSIYKTELVD
LADKVKGDDGVVFGTKPGDPKVNDKLDADGLPFIGSTVKYGDPFYSYINLNTGQSFITYY
KSQEACVVDNIKVCSNDSGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGKMLRAGGYNYYGTERLYSGMSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcaaccaagtggagtaatttgcccaaagctccgagtttaaagaatctgaca
gagggaaggtttggggagctgaaagagacgcaacacgctgctgttcaggatctgactaaa
gctcatatcgagtcttttgaccaggctgtcactgaaggactcaaccgcgttgtgcaggcg
atcccccccttggagttcacggtcaaaaatgacaggatcagcctcgtgtttgttgaagcc
accctgcacaacccgatggtcgccaaaggcagcatctgcagggaaatgaaggtgtttcca
gcggagtgtcggggaagaagatgttcctacagaggaaagctggtggcagacgtcagctgg
tcggtcaacggggtccctaaaggcatcatcaagcagtctctgggtcaagtgccaatcatg
gtgaaatccgcgcggtgtaacctgcacggcatgtcccctaaagagctcgtagaacatcac
gaagaagcagaggaaatgggaggctatttcatcgtgaatggaattgagaaggtaatccgt
atgctgataatgccgaggaggaacttccctatcgtcatgtcaagacctaagtggaagagc
agaggtcagggatacactcagtatggtatttctatgcgttctgtaagagatgagcacaca
gcggtcaacatgaatctacattatctggaaaatgggactgtgatgctgaacttcatctac
cagaaagagctttttttcctccctctaggctttgcgcttaaggccttggtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgcgaggacaattctttctacaagacc
tgtgcatcagagatgctgcgcatggtgatggaggagggctgcaccacccgcagcaaggtg
ctcaattaccttggagagcgcttcagggtgaagatgaaccttcctgagtggtacacaaat
gaacagtgtgccaacattctgttagatgagtgcatctgcatccacctgaaatccgacata
gagaaattctacctgctgtgtctaatgaaccggaagcttttcacgtttgccaagcaggag
tgtatggaggaaaacccagacagtattatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgtttctgaaggagaaaatgactgcgtggttggtgtcagtgaagatggcctta
acaaaaagaggccaaagatattctgccgattgcagcgctgaaagtatgatgaagattttc
aacatgggcactgacctgaccaagccttttgagtatttgttggccaccggaaacctcagc
tctaagtcaggtcttggcatgctgcagaacacgggcctgtgcgttgtggctgacaagctc
aacttcatccgttacctgtcccattttcgctgcgtccacagaggagcggcattcgccaag
atgaggaccactaccgtccgtaagctgctgccagagtcctggggcttcctctgtcctgtc
cacactccagacggggagccttgtggactcatgaaccacatgacggccagctgtgaaatt
gtggcaccaactttttccaccacatccctgcctgctctgctgtgttctcttggtgttact
ccgctggatggatctcctggcaagcctttttcggactgctaccccgtggttctggatggg
gctgttgttggctgggtggaatctgacttagctcaagctgtggctgactcactgcgcagt
ttcaaggttctaagagaaaagaagatccctccttggactgagatcgttctggtgcctaaa
acaggcaaggccagcttgtatcctggcctgttcctcttcacgactccctgccgcatggtg
agacctgtacgcaacttggctctcggcaagcaggagttgattggcacgtttgagcagctt
tacattaatgtaggaatcatggaggatgaggttgagagaggagtaacaacacatcaggag
cttttccctcacagcatgcttagcgtagtggctaacttcatcccttactcggaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaagcagacgatgggtttccccctg
caggcattcaccgaccgctccgataacaagctgtatcggctccagaccccacagagcccc
ctggtcaggccctatatgtacgaccactacaacctggacaactaccccagcggcaccaac
gccatcgtggctgttatatcctacacaggctacgacatggaggatgccatgattctgaac
aagtcatcatgggagagaggcttcgctcatgggagtatctacaagactgagctggtggac
ctggcagacaaggtgaagggagacgacggggtggtgtttggcaccaagccgggggaccct
aaagtaaatgacaagctggatgccgatgggctacctttcattggatcgacagttaagtac
ggcgaccctttctacagctacatcaacctcaacactggacagtccttcatcacctactac
aagagccaagaggcctgcgtcgtggacaatataaaggtctgcagcaacgacagcggctca
ggccgtttcaaacgcgtctgcatcaccgtacgagtgccgcgaaaccccaccatcggtgac
aagtttgccagccgccacggtcagaagggcatcctgagccgcctatggccagcagaggac
atgcccttcacggagagcggcatgagcccggacatcttgttcaacccgcacggcttccct
tcccgcatgacgatcggcatgctgatcgaaagcatggccggtaagtccggcgccctgcac
ggcctgagccacgatgccacgcccttcaccttctccgaagagaactctgcgctcgagtac
tttggcaaaatgctccgggcgggcggctacaactactacggcacggagcggctctacagc
ggaatgagcggccaggagctggaggcagacatcttcatcggcgtcgtctattaccagcgg
ctgcgtcacatggtctccgacaaattccaagttaggaccacaggagcacgagacaaggtg
accaaccagcctgtgggagggaggaacatccagggaggtatccgattcggggagatggag
cgagatgccctgctggctcacggctcttcgttcctgctccacgaccgcctcttcaactgc
tcggaccggtcagtggctcaggtgtgtgttgactgtggcagcctcctctcccctctgctg
gagaagccgccaccctactggtcggccatgcgccaccgaaagactgtctgcaccctgtgt
ggcaaaagtgactctattgactcagtgtctgttccttatgtcttccgctattttgtggct
gagctcgcagcgatgaacatcaaagttaaattagatgtcaagtga
DBGET
integrated database retrieval system
